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The map label for this gene is ydiF [H]

Identifier: 57652493

GI number: 57652493

Start: 254673

End: 256244

Strand: Reverse

Name: ydiF [H]

Synonym: SACOL0215

Alternate gene names: 57652493

Gene position: 256244-254673 (Counterclockwise)

Preceding gene: 57652495

Following gene: 57652492

Centisome position: 9.12

GC content: 36.77

Gene sequence:

>1572_bases
GTGACTTGCTTGAAACAAATCACATGGCACGACTTACAACATATCATTAAAGATGGTGATGTGATTGGTTTACCAGCATT
AGCTGTAGCCAACTTACCCGCCGAAGTTCTACGTGCTGTGTTAGCGCAACATGACACATATCATACGCCCAATGATTTAA
CGTTTATATTAGCGAATGATATTCATAGTTTAGGTGCCGCACCGGATTTAGATGATTTTATAGAACGTCGCATGATTAAA
CGTGTCATTATGAGTATTTTAACGGCTTCTTCCAAAACGGCACAAGCAATGAAAAATAATGACATTGAAGCTTATTTTTT
ACCACAAGGTATCATTGCAACTCATTATCGTCAGAGTAATCAATTATTACCTGGAGTTATTACTAAAATCGGATTAAACA
CAGCTGTTGATCCTAGATACGGTGGCGGTAAAGTAAATACACGAACAACGGATGATTTAGTTTCATTAGTAACCATCAAC
GATGAAACATACTTACATTACACATTCCCTAGCGTTGATGTGGCACTACTGAGAGGAACATACGCAGATCAACAAGGTAA
CATTTATTTAACTCAAGAAGCGTACTTGAGCGAGTGTTATCATGTCGCATTAAACGCGAAAGCCAATCATGGGAAAGTTA
TTGTACAAGTTAAAGCTTTAGTTGACGACTATCAACTAAAACCGAATGAAGTTGTTATCCCAGGAAATCTTGTCGATTAT
GTATACGTCACAGAAGATGAAAAGAATCACCGCCAAGTAATTCAAAGTCATTATTTACCAGCCTTGTCTGGAGAAGAACG
AATTGATGGAATACCTGAACCCGCATTACCTTTTAATAGTCGCAAATTGATTCTCCGACGTGCTGCTCAGTTTTTAACTT
ATGGCGATACAATTAGCATCGGTTATGGCATCAATAATGAACTCTCTAATTTATTGCATGAAGAATGTGTTGAACATGAT
GTGCAACCGATTTTAGATGTTGGCATTTTCGGTGGATTCGTTGGGAGTCGTGAACATTTTGGTATGAATTACAATGCAGA
TGTGCGCATGCCTCATGATCGAGCATGGGATTTTATTTATAACAATGGTGTATCAGTTGCCTATCTTAGCTTTGCTGAGG
TTGATCAATACGGCAATGTCAACGTGTCTTACTTCAATGACCGACTAAATGGATGTGGTGGCTTTATAGACATTACGCAA
TCTGTAAATAAAATTATCTTTTCAGGTACTTTTGTAGCTGGCAGTCATGTCTCATGCCATAATCAACGATTAAACATTGA
AACTGAAGGACAAAACCAGAAATTTGTATCAGATGTGAGCCATATCGACTTTAATGCACAATATTCACAATCACTCGAGC
AAGAAATCTATTTTGTTACTGATCGTGCAGTATTCGAACTCACCAATCAAGGCTTGAAACTAATTGAAATTGCACCAGGT
CTTGATTTGCATAAAGATATTTTGAATCAAATGGCTTTTAAACCAATTATTGCTGATCATTTAAAATTAATTGATACCAG
CATTTACAAAGAAAAATGGGGACAACTTAAACAATCAATTCATAAAGTATGA

Upstream 100 bases:

>100_bases
AAAAGATATTTCTAATTGATTTTAAACGTCGTTATGTTATATTTCTTGTAAGGGTTTACACAAAGTGTAAAAACGCTATA
TTTTATCAAATGTGATGGAG

Downstream 100 bases:

>100_bases
AAGTGAAGCTAAAGGGGGTATACTAATGAATTTCGATTGGATAAAAACGCGTTCAGACTTCGATGATGACAAGCCTGCCG
TTATTGATCACGCAAAACAA

Product: propionate CoA-transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 523; Mature: 522

Protein sequence:

>523_residues
MTCLKQITWHDLQHIIKDGDVIGLPALAVANLPAEVLRAVLAQHDTYHTPNDLTFILANDIHSLGAAPDLDDFIERRMIK
RVIMSILTASSKTAQAMKNNDIEAYFLPQGIIATHYRQSNQLLPGVITKIGLNTAVDPRYGGGKVNTRTTDDLVSLVTIN
DETYLHYTFPSVDVALLRGTYADQQGNIYLTQEAYLSECYHVALNAKANHGKVIVQVKALVDDYQLKPNEVVIPGNLVDY
VYVTEDEKNHRQVIQSHYLPALSGEERIDGIPEPALPFNSRKLILRRAAQFLTYGDTISIGYGINNELSNLLHEECVEHD
VQPILDVGIFGGFVGSREHFGMNYNADVRMPHDRAWDFIYNNGVSVAYLSFAEVDQYGNVNVSYFNDRLNGCGGFIDITQ
SVNKIIFSGTFVAGSHVSCHNQRLNIETEGQNQKFVSDVSHIDFNAQYSQSLEQEIYFVTDRAVFELTNQGLKLIEIAPG
LDLHKDILNQMAFKPIIADHLKLIDTSIYKEKWGQLKQSIHKV

Sequences:

>Translated_523_residues
MTCLKQITWHDLQHIIKDGDVIGLPALAVANLPAEVLRAVLAQHDTYHTPNDLTFILANDIHSLGAAPDLDDFIERRMIK
RVIMSILTASSKTAQAMKNNDIEAYFLPQGIIATHYRQSNQLLPGVITKIGLNTAVDPRYGGGKVNTRTTDDLVSLVTIN
DETYLHYTFPSVDVALLRGTYADQQGNIYLTQEAYLSECYHVALNAKANHGKVIVQVKALVDDYQLKPNEVVIPGNLVDY
VYVTEDEKNHRQVIQSHYLPALSGEERIDGIPEPALPFNSRKLILRRAAQFLTYGDTISIGYGINNELSNLLHEECVEHD
VQPILDVGIFGGFVGSREHFGMNYNADVRMPHDRAWDFIYNNGVSVAYLSFAEVDQYGNVNVSYFNDRLNGCGGFIDITQ
SVNKIIFSGTFVAGSHVSCHNQRLNIETEGQNQKFVSDVSHIDFNAQYSQSLEQEIYFVTDRAVFELTNQGLKLIEIAPG
LDLHKDILNQMAFKPIIADHLKLIDTSIYKEKWGQLKQSIHKV
>Mature_522_residues
TCLKQITWHDLQHIIKDGDVIGLPALAVANLPAEVLRAVLAQHDTYHTPNDLTFILANDIHSLGAAPDLDDFIERRMIKR
VIMSILTASSKTAQAMKNNDIEAYFLPQGIIATHYRQSNQLLPGVITKIGLNTAVDPRYGGGKVNTRTTDDLVSLVTIND
ETYLHYTFPSVDVALLRGTYADQQGNIYLTQEAYLSECYHVALNAKANHGKVIVQVKALVDDYQLKPNEVVIPGNLVDYV
YVTEDEKNHRQVIQSHYLPALSGEERIDGIPEPALPFNSRKLILRRAAQFLTYGDTISIGYGINNELSNLLHEECVEHDV
QPILDVGIFGGFVGSREHFGMNYNADVRMPHDRAWDFIYNNGVSVAYLSFAEVDQYGNVNVSYFNDRLNGCGGFIDITQS
VNKIIFSGTFVAGSHVSCHNQRLNIETEGQNQKFVSDVSHIDFNAQYSQSLEQEIYFVTDRAVFELTNQGLKLIEIAPGL
DLHKDILNQMAFKPIIADHLKLIDTSIYKEKWGQLKQSIHKV

Specific function: Unknown

COG id: COG4670

COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae AtoD [H]

Homologues:

Organism=Escherichia coli, GI1787985, Length=482, Percent_Identity=35.0622406639004, Blast_Score=279, Evalue=3e-76,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014388
- InterPro:   IPR004165 [H]

Pfam domain/function: PF01144 CoA_trans [H]

EC number: NA

Molecular weight: Translated: 58649; Mature: 58518

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTCLKQITWHDLQHIIKDGDVIGLPALAVANLPAEVLRAVLAQHDTYHTPNDLTFILAND
CCHHHHHHHHHHHHHHCCCCEECCCHHHHHCCCHHHHHHHHHCCCCCCCCCCEEEEEECC
IHSLGAAPDLDDFIERRMIKRVIMSILTASSKTAQAMKNNDIEAYFLPQGIIATHYRQSN
HHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEECCCCHHHHHHCCCC
QLLPGVITKIGLNTAVDPRYGGGKVNTRTTDDLVSLVTINDETYLHYTFPSVDVALLRGT
CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCEEEEHCCC
YADQQGNIYLTQEAYLSECYHVALNAKANHGKVIVQVKALVDDYQLKPNEVVIPGNLVDY
CCCCCCCEEEEHHHHHHHHHEEEEECCCCCCEEEEEEEEHHHCCCCCCCCEEECCCEEEE
VYVTEDEKNHRQVIQSHYLPALSGEERIDGIPEPALPFNSRKLILRRAAQFLTYGDTISI
EEEECCCHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEE
GYGINNELSNLLHEECVEHDVQPILDVGIFGGFVGSREHFGMNYNADVRMPHDRAWDFIY
ECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHCCCCCCCCEECCCCCCCHHEE
NNGVSVAYLSFAEVDQYGNVNVSYFNDRLNGCGGFIDITQSVNKIIFSGTFVAGSHVSCH
CCCCEEEEEEHHHHHCCCCCEEEEECCCCCCCCCCEEHHHHHHHHEEECEEEECCCCEEC
NQRLNIETEGQNQKFVSDVSHIDFNAQYSQSLEQEIYFVTDRAVFELTNQGLKLIEIAPG
CCEEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHEEEEEECHHHHHHHHCCCEEEEECCC
LDLHKDILNQMAFKPIIADHLKLIDTSIYKEKWGQLKQSIHKV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TCLKQITWHDLQHIIKDGDVIGLPALAVANLPAEVLRAVLAQHDTYHTPNDLTFILAND
CHHHHHHHHHHHHHHCCCCEECCCHHHHHCCCHHHHHHHHHCCCCCCCCCCEEEEEECC
IHSLGAAPDLDDFIERRMIKRVIMSILTASSKTAQAMKNNDIEAYFLPQGIIATHYRQSN
HHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEECCCCHHHHHHCCCC
QLLPGVITKIGLNTAVDPRYGGGKVNTRTTDDLVSLVTINDETYLHYTFPSVDVALLRGT
CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCEEEEHCCC
YADQQGNIYLTQEAYLSECYHVALNAKANHGKVIVQVKALVDDYQLKPNEVVIPGNLVDY
CCCCCCCEEEEHHHHHHHHHEEEEECCCCCCEEEEEEEEHHHCCCCCCCCEEECCCEEEE
VYVTEDEKNHRQVIQSHYLPALSGEERIDGIPEPALPFNSRKLILRRAAQFLTYGDTISI
EEEECCCHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEE
GYGINNELSNLLHEECVEHDVQPILDVGIFGGFVGSREHFGMNYNADVRMPHDRAWDFIY
ECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHCCCCCCCCEECCCCCCCHHEE
NNGVSVAYLSFAEVDQYGNVNVSYFNDRLNGCGGFIDITQSVNKIIFSGTFVAGSHVSCH
CCCCEEEEEEHHHHHCCCCCEEEEECCCCCCCCCCEEHHHHHHHHEEECEEEECCCCEEC
NQRLNIETEGQNQKFVSDVSHIDFNAQYSQSLEQEIYFVTDRAVFELTNQGLKLIEIAPG
CCEEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHEEEEEECHHHHHHHHCCCEEEEECCC
LDLHKDILNQMAFKPIIADHLKLIDTSIYKEKWGQLKQSIHKV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 3541912; 7984428 [H]