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The map label for this gene is ybbR [H]

Identifier: 57652180

GI number: 57652180

Start: 2223484

End: 2224416

Strand: Reverse

Name: ybbR [H]

Synonym: SACOL2152

Alternate gene names: 57652180

Gene position: 2224416-2223484 (Counterclockwise)

Preceding gene: 57652181

Following gene: 57652179

Centisome position: 79.18

GC content: 30.12

Gene sequence:

>933_bases
ATGCTAGAAAGTAAATGGGGCTTGAGATTTATTGCCTTTCTTTTGGCATTGTTTTTCTTTTTATCTGTTAACAATGTTTT
TGGAAATATCTTTAACACTGGTAATCTTGGTCAAAAGTCTAGTAAAACGATTCAAGATGTACCCGTTGAAATTCTTTATA
ACACTAAAGATTTGCATTTAACAAAAGCGCCTGAAACAGTTAATGTGACTATTTCAGGACCACAATCAAAGATAATAAAA
ATTGAAAATCCAGAAGATTTAAGAGTAGTGATTGATTTATCAAATGCTAAAGCTGGAAAATATCAAGAGAAGTATCAAGT
TAAAGGGTTAGCTGATGACATTCATTATTCTGTAAAACCTAAATTAGCAAATATTACGCTTGAAAACAAAGTAACTAAAA
AGATGACAGTTCAACCTGATGTAAGTCAGAGTGATATTGATCCACTTTATAAAATTACAAAGCAAGAAGTTTCACCACAA
ACAGTTAAAGTAACAGGTGGAGAAGAACAATTGAATGATATCGCTTATTTAAAAGCCACTTTTAAAACTAATAAAAAGAT
TAATGGTGACACAAAAGATGTCGCAGAAGTAACGGCTTTTGATAAAAAACTGAATAAATTAAATGTATCGATTCAACCTA
ATGAAGTGAATTTACAAGTTAAAGTAGAGCCTTTTAGCAAAAAGGTTAAAGTAAATGTTAAACAGAAAGGTAGTTTAGCA
GATGATAAAGAGTTAAGTTCGATTGATTTAGAAGATAAAGAAATTGAAATCTTCGGTAGTCGAGATGACTTACAAAATAT
AAGCGAAGTTGATGCAGAAGTAGATTTAGATGGTATTTCAGAATCAACTGAAAAGACTGTAAAAATCAATTTACCAGAAC
ATGTCACTAAAGCACAACCAAGTGAAACGAAGGCTTATATAAATGTAAAATAA

Upstream 100 bases:

>100_bases
GATGGAAAATTACGACGAGACATTTCAAACGAAATTTTTGAAGAGTTGCTTGCTGAACATTGGTTTGGCACACGCTTTCA
AAAGAAAGGTGTGAAATAAT

Downstream 100 bases:

>100_bases
ATAGCTAAATTAAAGGAGAGTAAACAATGGGAAAATATTTTGGTACAGACGGAGTAAGAGGTGTCGCAAACCAAGAACTA
ACACCTGAATTGGCATTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MLESKWGLRFIAFLLALFFFLSVNNVFGNIFNTGNLGQKSSKTIQDVPVEILYNTKDLHLTKAPETVNVTISGPQSKIIK
IENPEDLRVVIDLSNAKAGKYQEKYQVKGLADDIHYSVKPKLANITLENKVTKKMTVQPDVSQSDIDPLYKITKQEVSPQ
TVKVTGGEEQLNDIAYLKATFKTNKKINGDTKDVAEVTAFDKKLNKLNVSIQPNEVNLQVKVEPFSKKVKVNVKQKGSLA
DDKELSSIDLEDKEIEIFGSRDDLQNISEVDAEVDLDGISESTEKTVKINLPEHVTKAQPSETKAYINVK

Sequences:

>Translated_310_residues
MLESKWGLRFIAFLLALFFFLSVNNVFGNIFNTGNLGQKSSKTIQDVPVEILYNTKDLHLTKAPETVNVTISGPQSKIIK
IENPEDLRVVIDLSNAKAGKYQEKYQVKGLADDIHYSVKPKLANITLENKVTKKMTVQPDVSQSDIDPLYKITKQEVSPQ
TVKVTGGEEQLNDIAYLKATFKTNKKINGDTKDVAEVTAFDKKLNKLNVSIQPNEVNLQVKVEPFSKKVKVNVKQKGSLA
DDKELSSIDLEDKEIEIFGSRDDLQNISEVDAEVDLDGISESTEKTVKINLPEHVTKAQPSETKAYINVK
>Mature_310_residues
MLESKWGLRFIAFLLALFFFLSVNNVFGNIFNTGNLGQKSSKTIQDVPVEILYNTKDLHLTKAPETVNVTISGPQSKIIK
IENPEDLRVVIDLSNAKAGKYQEKYQVKGLADDIHYSVKPKLANITLENKVTKKMTVQPDVSQSDIDPLYKITKQEVSPQ
TVKVTGGEEQLNDIAYLKATFKTNKKINGDTKDVAEVTAFDKKLNKLNVSIQPNEVNLQVKVEPFSKKVKVNVKQKGSLA
DDKELSSIDLEDKEIEIFGSRDDLQNISEVDAEVDLDGISESTEKTVKINLPEHVTKAQPSETKAYINVK

Specific function: Unknown

COG id: COG4856

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 4 YbbR-like domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012505 [H]

Pfam domain/function: PF07949 YbbR [H]

EC number: NA

Molecular weight: Translated: 34625; Mature: 34625

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLESKWGLRFIAFLLALFFFLSVNNVFGNIFNTGNLGQKSSKTIQDVPVEILYNTKDLHL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCEEEEECCCEEEE
TKAPETVNVTISGPQSKIIKIENPEDLRVVIDLSNAKAGKYQEKYQVKGLADDIHYSVKP
EECCCEEEEEEECCCCEEEEECCCCCEEEEEEECCCCCCCCHHHHEECCCCCCCEEECCC
KLANITLENKVTKKMTVQPDVSQSDIDPLYKITKQEVSPQTVKVTGGEEQLNDIAYLKAT
EEEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCEEEEECCHHHHHHEEEEEEE
FKTNKKINGDTKDVAEVTAFDKKLNKLNVSIQPNEVNLQVKVEPFSKKVKVNVKQKGSLA
ECCCCCCCCCCHHHHHHHHHHHHHHEEEEEECCCEEEEEEEECCCCCEEEEEEECCCCCC
DDKELSSIDLEDKEIEIFGSRDDLQNISEVDAEVDLDGISESTEKTVKINLPEHVTKAQP
CCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCHHHHCCCC
SETKAYINVK
CCCEEEEEEC
>Mature Secondary Structure
MLESKWGLRFIAFLLALFFFLSVNNVFGNIFNTGNLGQKSSKTIQDVPVEILYNTKDLHL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCEEEEECCCEEEE
TKAPETVNVTISGPQSKIIKIENPEDLRVVIDLSNAKAGKYQEKYQVKGLADDIHYSVKP
EECCCEEEEEEECCCCEEEEECCCCCEEEEEEECCCCCCCCHHHHEECCCCCCCEEECCC
KLANITLENKVTKKMTVQPDVSQSDIDPLYKITKQEVSPQTVKVTGGEEQLNDIAYLKAT
EEEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCEEEEECCHHHHHHEEEEEEE
FKTNKKINGDTKDVAEVTAFDKKLNKLNVSIQPNEVNLQVKVEPFSKKVKVNVKQKGSLA
ECCCCCCCCCCHHHHHHHHHHHHHHEEEEEECCCEEEEEEEECCCCCEEEEEEECCCCCC
DDKELSSIDLEDKEIEIFGSRDDLQNISEVDAEVDLDGISESTEKTVKINLPEHVTKAQP
CCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCHHHHCCCC
SETKAYINVK
CCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]