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The map label for this gene is ccpA

Identifier: 57652034

GI number: 57652034

Start: 1830305

End: 1831294

Strand: Reverse

Name: ccpA

Synonym: SACOL1786

Alternate gene names: 57652034

Gene position: 1831294-1830305 (Counterclockwise)

Preceding gene: 57652035

Following gene: 57652031

Centisome position: 65.18

GC content: 33.13

Gene sequence:

>990_bases
ATGACAGTTACTATATATGATGTAGCAAGAGAAGCGCGTGTCTCTATGGCCACAGTGTCGCGTGTTGTTAATGGGAACCA
AAATGTTAAAGCAGAAACTAAAAATAAAGTTAACGAAGTCATTAAGCGTTTGAATTATCGTCCAAATGCTGTTGCTAGAG
GTTTAGCTAGTAAAAAGACAACAACAGTAGGTGTGATCATTCCAGATATATCTAATATCTATTATTCACAACTTGCTCGT
GGACTTGAAGATATTGCAACAATGTATAAATATCACTCAATTATTTCAAATTCAGATAACGATCCTGAAAAGGAAAAAGA
AATTTTTAATAACTTATTAAGTAAACAGGTTGATGGTATTATTTTCCTTGGTGGTACAATTACTGAAGAAATGAAAGAAT
TGATAAATCAATCATCTGTACCTGTAGTAGTATCAGGAACAAATGGTAAGGATGCACATATAGCATCAGTTAATATTGAT
TTTACTGAAGCTGCGAAAGAAATTACGGGAGAATTAATTGAAAAAGGCGCTAAATCATTTGCTTTAGTAGGTGGAGAACA
TTCTAAAAAAGCTCAAGAAGATGTTTTAGAAGGTTTAACTGAAGTGTTAAATAAAAATGGCCTTCAATTAGGTGATACAT
TGAATTGTTCTGGTGCTGAAAGTTATAAAGAAGGCGTAAAAGCTTTTGCCAAAATGAAAGGCAATTTGCCAGATGCCATT
TTATGTATCAGCGACGAAGAAGCAATTGGTATTATGCATAGTGCAATGGATGCTGGTATTAAAGTTCCAGAGGAATTACA
AATTATTAGTTTCAATAATACACGATTAGTTGAGATGGTTAGACCACAACTTTCTAGTGTTATTCAACCATTATATGATA
TCGGTGCAGTAGGGATGCGCTTATTAACAAAATATATGAACGATGAAAAGATAGAAGAACCAAATGTAGTTTTACCTCAC
AGAATTGAATACCGAGGAACTACAAAATAA

Upstream 100 bases:

>100_bases
CAAACAAAAATATGTTACTGTAAATTAAAATATGGTAAACTATGAAAATGAAATGAAAACATGTTATTATAATGAATAAA
ACGTTTACAAGGAGGAAATT

Downstream 100 bases:

>100_bases
ATTCACAAAATTAGGCATTCATCTAACGACCCAAATTATATGGGTGTTGGAAGAATGCCTTTTATTTATCTTTTAAAATC
GTTGCAGATTAGGTTACTTA

Product: catabolite control protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MTVTIYDVAREARVSMATVSRVVNGNQNVKAETKNKVNEVIKRLNYRPNAVARGLASKKTTTVGVIIPDISNIYYSQLAR
GLEDIATMYKYHSIISNSDNDPEKEKEIFNNLLSKQVDGIIFLGGTITEEMKELINQSSVPVVVSGTNGKDAHIASVNID
FTEAAKEITGELIEKGAKSFALVGGEHSKKAQEDVLEGLTEVLNKNGLQLGDTLNCSGAESYKEGVKAFAKMKGNLPDAI
LCISDEEAIGIMHSAMDAGIKVPEELQIISFNNTRLVEMVRPQLSSVIQPLYDIGAVGMRLLTKYMNDEKIEEPNVVLPH
RIEYRGTTK

Sequences:

>Translated_329_residues
MTVTIYDVAREARVSMATVSRVVNGNQNVKAETKNKVNEVIKRLNYRPNAVARGLASKKTTTVGVIIPDISNIYYSQLAR
GLEDIATMYKYHSIISNSDNDPEKEKEIFNNLLSKQVDGIIFLGGTITEEMKELINQSSVPVVVSGTNGKDAHIASVNID
FTEAAKEITGELIEKGAKSFALVGGEHSKKAQEDVLEGLTEVLNKNGLQLGDTLNCSGAESYKEGVKAFAKMKGNLPDAI
LCISDEEAIGIMHSAMDAGIKVPEELQIISFNNTRLVEMVRPQLSSVIQPLYDIGAVGMRLLTKYMNDEKIEEPNVVLPH
RIEYRGTTK
>Mature_328_residues
TVTIYDVAREARVSMATVSRVVNGNQNVKAETKNKVNEVIKRLNYRPNAVARGLASKKTTTVGVIIPDISNIYYSQLARG
LEDIATMYKYHSIISNSDNDPEKEKEIFNNLLSKQVDGIIFLGGTITEEMKELINQSSVPVVVSGTNGKDAHIASVNIDF
TEAAKEITGELIEKGAKSFALVGGEHSKKAQEDVLEGLTEVLNKNGLQLGDTLNCSGAESYKEGVKAFAKMKGNLPDAIL
CISDEEAIGIMHSAMDAGIKVPEELQIISFNNTRLVEMVRPQLSSVIQPLYDIGAVGMRLLTKYMNDEKIEEPNVVLPHR
IEYRGTTK

Specific function: Transcriptional regulator involved in both the repression of carbohydrate utilization genes and in the positive regulation of genes involved in excretion of excess carbon

COG id: COG1609

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lacI-type DNA-binding domain

Homologues:

Organism=Escherichia coli, GI1790369, Length=328, Percent_Identity=28.3536585365854, Blast_Score=163, Evalue=2e-41,
Organism=Escherichia coli, GI1790194, Length=327, Percent_Identity=26.605504587156, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI1787948, Length=328, Percent_Identity=26.5243902439024, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1789068, Length=299, Percent_Identity=27.7591973244147, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1789202, Length=299, Percent_Identity=28.4280936454849, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI48994940, Length=303, Percent_Identity=25.0825082508251, Blast_Score=125, Evalue=6e-30,
Organism=Escherichia coli, GI1788474, Length=302, Percent_Identity=26.8211920529801, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1787580, Length=315, Percent_Identity=26.3492063492064, Blast_Score=118, Evalue=4e-28,
Organism=Escherichia coli, GI1790715, Length=329, Percent_Identity=25.2279635258359, Blast_Score=118, Evalue=6e-28,
Organism=Escherichia coli, GI1787906, Length=332, Percent_Identity=22.5903614457831, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1786540, Length=337, Percent_Identity=26.4094955489614, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1786268, Length=332, Percent_Identity=25.6024096385542, Blast_Score=95, Evalue=5e-21,
Organism=Escherichia coli, GI1789456, Length=342, Percent_Identity=25.7309941520468, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1790689, Length=296, Percent_Identity=26.0135135135135, Blast_Score=76, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CCPA_STAAC (Q5HF38)

Other databases:

- EMBL:   CP000046
- RefSeq:   YP_186619.1
- ProteinModelPortal:   Q5HF38
- SMR:   Q5HF38
- STRING:   Q5HF38
- EnsemblBacteria:   EBSTAT00000009896
- GeneID:   3236753
- GenomeReviews:   CP000046_GR
- KEGG:   sac:SACOL1786
- TIGR:   SACOL1786
- eggNOG:   COG1609
- GeneTree:   EBGT00050000023815
- HOGENOM:   HBG753640
- OMA:   ELELINT
- ProtClustDB:   CLSK885525
- BioCyc:   SAUR93062:SACOL1786-MONOMER
- GO:   GO:0005622
- InterPro:   IPR006377
- InterPro:   IPR000843
- InterPro:   IPR010982
- InterPro:   IPR001761
- PRINTS:   PR00036
- SMART:   SM00354
- TIGRFAMs:   TIGR01481

Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1; SSF47413 Lambda_like_DNA

EC number: NA

Molecular weight: Translated: 36061; Mature: 35930

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: PS00356 HTH_LACI_1; PS50932 HTH_LACI_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVTIYDVAREARVSMATVSRVVNGNQNVKAETKNKVNEVIKRLNYRPNAVARGLASKKT
CEEEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCC
TTVGVIIPDISNIYYSQLARGLEDIATMYKYHSIISNSDNDPEKEKEIFNNLLSKQVDGI
CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCE
IFLGGTITEEMKELINQSSVPVVVSGTNGKDAHIASVNIDFTEAAKEITGELIEKGAKSF
EEECCHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCHHE
ALVGGEHSKKAQEDVLEGLTEVLNKNGLQLGDTLNCSGAESYKEGVKAFAKMKGNLPDAI
EEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEE
LCISDEEAIGIMHSAMDAGIKVPEELQIISFNNTRLVEMVRPQLSSVIQPLYDIGAVGMR
EEECCCHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LLTKYMNDEKIEEPNVVLPHRIEYRGTTK
HHHHHHCCCCCCCCCEECCCEECCCCCCC
>Mature Secondary Structure 
TVTIYDVAREARVSMATVSRVVNGNQNVKAETKNKVNEVIKRLNYRPNAVARGLASKKT
EEEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCC
TTVGVIIPDISNIYYSQLARGLEDIATMYKYHSIISNSDNDPEKEKEIFNNLLSKQVDGI
CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCE
IFLGGTITEEMKELINQSSVPVVVSGTNGKDAHIASVNIDFTEAAKEITGELIEKGAKSF
EEECCHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCHHE
ALVGGEHSKKAQEDVLEGLTEVLNKNGLQLGDTLNCSGAESYKEGVKAFAKMKGNLPDAI
EEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEE
LCISDEEAIGIMHSAMDAGIKVPEELQIISFNNTRLVEMVRPQLSSVIQPLYDIGAVGMR
EEECCCHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LLTKYMNDEKIEEPNVVLPHRIEYRGTTK
HHHHHHCCCCCCCCCEECCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA