Definition | Staphylococcus aureus subsp. aureus COL chromosome, complete genome. |
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Accession | NC_002951 |
Length | 2,809,422 |
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The map label for this gene is isdH
Identifier: 57652029
GI number: 57652029
Start: 1821378
End: 1824065
Strand: Reverse
Name: isdH
Synonym: SACOL1781
Alternate gene names: 57652029
Gene position: 1824065-1821378 (Counterclockwise)
Preceding gene: 228943815
Following gene: 57652027
Centisome position: 64.93
GC content: 33.56
Gene sequence:
>2688_bases ATGAACAAACATCACCCAAAATTAAGGTCTTTCTATTCTATTAGAAAATCAACTCTAGGCGTTGCATCGGTCATTGTCAG TACACTATTTTTAATTACTTCTCAACATCAAGCACAAGCAGCAGAAAATACAAATACTTCAGATAAAATCTCGGAAAATC AAAATAATAATGCAACTACAACTCAGCCACCTAAGGATACAAATCAAACACAACCTGCTACGCAACCAGCAAACACTGCG AAAAACTATCCTGCAGCGGATGAATCACTTAAAGATGCAATTAAAGATCCTGCATTAGAAAATAAAGAACATGATATAGG TCCAAGAGAACAAGTCAATTTCCAGTTATTAGATAAAAACAATGAAACGCAGTACTATCACTTTTTCAGCATCAAAGATC CAGCAGATGTGTATTACACTAAAAAGAAAGCAGAAGTTGAATTAGACATCAATACTGCTTCAACATGGAAGAAGTTTGAA GTCTATGAAAACAATCAAAAATTGCCAGTGAGACTTGTATCATATAGTCCTGTACCAGAAGACCATGCCTATATTCGATT CCCAGTTTCAGATGGCACACAAGAATTGAAAATTGTTTCTTCGACTCAAATTGATGATGGAGAAGAAACAAATTATGATT ATACTAAATTAGTATTTGCTAAACCTATTTATAACGATCCTTCACTTGTAAAATCAGATACAAATGATGCAGTAGTAACG AATGATCAATCAAGTTCAGTCGCAAGTAATCAAACAAACACGAATACATCTAATCAAAATACATCAACGATCAACAATGC TAATAATCAACCGCAGGCAACGACCAATATGAGTCAACCTGCACAACCAAAATCGTCAACGAATGCAGATCAAGCGTCAA GCCAACCAGCTCATGAAACAAATTCTAATGGTAATACTAACGATAAAACGAATGAGTCAAGTAATCAGTCGGATGTTAAT CAACAGTATCCACCAGCAGATGAATCACTACAAGATGCAATTAAAAACCCGGCTATCATCGATAAAGAACATACAGCTGA TAATTGGCGACCAATTGATTTTCAAATGAAAAATGATAAAGGTGAAAGACAGTTCTATCATTATGCTAGTACTGTTGAAC CAGCAACTGTCATTTTTACAAAAACAGGACCAATAATTGAATTAGGTTTAAAGACAGCTTCAACATGGAAGAAATTTGAA GTTTATGAAGGTGACAAAAAGTTACCAGTCGAATTAGTATCATATGATTCTGATAAAGATTATGCCTATATTCGTTTCCC AGTATCTAATGGTACGAGAGAAGTTAAAATTGTGTCATCTATTGAATATGGTGAGAACATCCATGAAGACTATGATTATA CGCTAATGGTCTTTGCACAGCCTATTACTAATAACCCAGACGACTATGTGGATGAAGAAACATACAATTTACAAAAATTA TTAGCTCCGTATCACAAAGCTAAAACGTTAGAAAGACAAGTTTATGAATTAGAAAAATTACAAGAGAAATTGCCAGAAAA ATATAAGGCGGAATATAAAAAGAAATTAGATCAAACTAGAGTAGAGTTAGCTGATCAAGTTAAATCAGCAGTGACGGAAT TTGAAAATGTTACACCTACAAATGATCAATTAACAGATTTACAAGAAGCGCATTTTGTTGTTTTTGAAAGTGAAGAAAAT AGTGAGTCAGTTATGGACGGCTTTGTTGAACATCCATTCTATACAGCAACTTTAAATGGTCAAAAATATGTAGTGATGAA AACAAAGGATGACAGTTACTGGAAAGATTTAATTGTAGAAGGTAAACGTGTCACTACTGTTTCTAAAGATCCTAAAAATA ATTCTAGAACGCTGATTTTCCCATATATACCTGACAAAGCAGTTTACAATGCGATTGTTAAAGTCGTTGTGGCAAACATT GGTTATGAAGGTCAATATCATGTCAGAATTATAAATCAGGATATCAATACAAAAGATGATGATACATCACAAAATAACAC GAGTGAACCGCTAAATGTACAAACAGGACAAGAAGGTAAGGTTGCTGATACAGATGTAGCTGAAAATAGCAGCACTGCAA CAAATCCTAAAGATGCGTCTGATAAAGCAGATGTGATAGAACCAGAGTCTGACGTGGTTAAAGATGCTGATAATAATATT GATAAAGATGTGCAACATGATGTTGATCATTTATCCGATATGTCGGATAATAATCACTTCGATAAATATGATTTAAAAGA AATGGATACTCAAATTGCCAAAGATACTGATAGAAATGTGGATAAAGATGCCGATAATAGCGTTGGTATGTCATCTAATG TCGATACTGATAAAGACTCTAATAAAAATAAAGACAAAGTCATACAGCTGAATCATATTGCCGATAAAAATAATCATACT GGAAAAGCAGCAAAGCTTGACGTAGTGAAACAAAATTATAATAATACAGACAAAGTTACTGACAAAAAAACAACTGAACA TCTGCCGAGTGATATTCATAAAACTGTAGATAAAACAGTGAAAACAAAAGAAAAAGCCGGCACACCATCGAAAGAAAACA AACTTAGTCAATCTAAAATGCTACCAAAAACTGGAGAAACAACTTCAAGCCAATCATGGTGGGGCTTATATGCGTTATTA GGTATGTTAGCTTTATTCATTCCTAAATTCAGAAAAGAATCTAAATAA
Upstream 100 bases:
>100_bases AGGTTGCAATATTTAATTGGGATGCGCTACAATTAACACTAATAATTGATATTGATAATTATTATCAATTAAATATAATC TTATAGGAGTTGTTAACAAC
Downstream 100 bases:
>100_bases TTAACTAAATATAGCATATGTATGATTAACTTTGTAGACAATGTGAAAGCAATTAATTTATAAACTATTGATTGGTTTAA TGGCTTTCCTTTAGAGTAAA
Product: cell wall surface anchor family protein
Products: NA
Alternate protein names: Haptoglobin receptor A; Staphylococcus aureus surface protein I
Number of amino acids: Translated: 895; Mature: 895
Protein sequence:
>895_residues MNKHHPKLRSFYSIRKSTLGVASVIVSTLFLITSQHQAQAAENTNTSDKISENQNNNATTTQPPKDTNQTQPATQPANTA KNYPAADESLKDAIKDPALENKEHDIGPREQVNFQLLDKNNETQYYHFFSIKDPADVYYTKKKAEVELDINTASTWKKFE VYENNQKLPVRLVSYSPVPEDHAYIRFPVSDGTQELKIVSSTQIDDGEETNYDYTKLVFAKPIYNDPSLVKSDTNDAVVT NDQSSSVASNQTNTNTSNQNTSTINNANNQPQATTNMSQPAQPKSSTNADQASSQPAHETNSNGNTNDKTNESSNQSDVN QQYPPADESLQDAIKNPAIIDKEHTADNWRPIDFQMKNDKGERQFYHYASTVEPATVIFTKTGPIIELGLKTASTWKKFE VYEGDKKLPVELVSYDSDKDYAYIRFPVSNGTREVKIVSSIEYGENIHEDYDYTLMVFAQPITNNPDDYVDEETYNLQKL LAPYHKAKTLERQVYELEKLQEKLPEKYKAEYKKKLDQTRVELADQVKSAVTEFENVTPTNDQLTDLQEAHFVVFESEEN SESVMDGFVEHPFYTATLNGQKYVVMKTKDDSYWKDLIVEGKRVTTVSKDPKNNSRTLIFPYIPDKAVYNAIVKVVVANI GYEGQYHVRIINQDINTKDDDTSQNNTSEPLNVQTGQEGKVADTDVAENSSTATNPKDASDKADVIEPESDVVKDADNNI DKDVQHDVDHLSDMSDNNHFDKYDLKEMDTQIAKDTDRNVDKDADNSVGMSSNVDTDKDSNKNKDKVIQLNHIADKNNHT GKAAKLDVVKQNYNNTDKVTDKKTTEHLPSDIHKTVDKTVKTKEKAGTPSKENKLSQSKMLPKTGETTSSQSWWGLYALL GMLALFIPKFRKESK
Sequences:
>Translated_895_residues MNKHHPKLRSFYSIRKSTLGVASVIVSTLFLITSQHQAQAAENTNTSDKISENQNNNATTTQPPKDTNQTQPATQPANTA KNYPAADESLKDAIKDPALENKEHDIGPREQVNFQLLDKNNETQYYHFFSIKDPADVYYTKKKAEVELDINTASTWKKFE VYENNQKLPVRLVSYSPVPEDHAYIRFPVSDGTQELKIVSSTQIDDGEETNYDYTKLVFAKPIYNDPSLVKSDTNDAVVT NDQSSSVASNQTNTNTSNQNTSTINNANNQPQATTNMSQPAQPKSSTNADQASSQPAHETNSNGNTNDKTNESSNQSDVN QQYPPADESLQDAIKNPAIIDKEHTADNWRPIDFQMKNDKGERQFYHYASTVEPATVIFTKTGPIIELGLKTASTWKKFE VYEGDKKLPVELVSYDSDKDYAYIRFPVSNGTREVKIVSSIEYGENIHEDYDYTLMVFAQPITNNPDDYVDEETYNLQKL LAPYHKAKTLERQVYELEKLQEKLPEKYKAEYKKKLDQTRVELADQVKSAVTEFENVTPTNDQLTDLQEAHFVVFESEEN SESVMDGFVEHPFYTATLNGQKYVVMKTKDDSYWKDLIVEGKRVTTVSKDPKNNSRTLIFPYIPDKAVYNAIVKVVVANI GYEGQYHVRIINQDINTKDDDTSQNNTSEPLNVQTGQEGKVADTDVAENSSTATNPKDASDKADVIEPESDVVKDADNNI DKDVQHDVDHLSDMSDNNHFDKYDLKEMDTQIAKDTDRNVDKDADNSVGMSSNVDTDKDSNKNKDKVIQLNHIADKNNHT GKAAKLDVVKQNYNNTDKVTDKKTTEHLPSDIHKTVDKTVKTKEKAGTPSKENKLSQSKMLPKTGETTSSQSWWGLYALL GMLALFIPKFRKESK >Mature_895_residues MNKHHPKLRSFYSIRKSTLGVASVIVSTLFLITSQHQAQAAENTNTSDKISENQNNNATTTQPPKDTNQTQPATQPANTA KNYPAADESLKDAIKDPALENKEHDIGPREQVNFQLLDKNNETQYYHFFSIKDPADVYYTKKKAEVELDINTASTWKKFE VYENNQKLPVRLVSYSPVPEDHAYIRFPVSDGTQELKIVSSTQIDDGEETNYDYTKLVFAKPIYNDPSLVKSDTNDAVVT NDQSSSVASNQTNTNTSNQNTSTINNANNQPQATTNMSQPAQPKSSTNADQASSQPAHETNSNGNTNDKTNESSNQSDVN QQYPPADESLQDAIKNPAIIDKEHTADNWRPIDFQMKNDKGERQFYHYASTVEPATVIFTKTGPIIELGLKTASTWKKFE VYEGDKKLPVELVSYDSDKDYAYIRFPVSNGTREVKIVSSIEYGENIHEDYDYTLMVFAQPITNNPDDYVDEETYNLQKL LAPYHKAKTLERQVYELEKLQEKLPEKYKAEYKKKLDQTRVELADQVKSAVTEFENVTPTNDQLTDLQEAHFVVFESEEN SESVMDGFVEHPFYTATLNGQKYVVMKTKDDSYWKDLIVEGKRVTTVSKDPKNNSRTLIFPYIPDKAVYNAIVKVVVANI GYEGQYHVRIINQDINTKDDDTSQNNTSEPLNVQTGQEGKVADTDVAENSSTATNPKDASDKADVIEPESDVVKDADNNI DKDVQHDVDHLSDMSDNNHFDKYDLKEMDTQIAKDTDRNVDKDADNSVGMSSNVDTDKDSNKNKDKVIQLNHIADKNNHT GKAAKLDVVKQNYNNTDKVTDKKTTEHLPSDIHKTVDKTVKTKEKAGTPSKENKLSQSKMLPKTGETTSSQSWWGLYALL GMLALFIPKFRKESK
Specific function: Binds human plasma haptoglobin-hemoglobin complexes, haptoglobin and hemoglobin. Binds haptoglobin-hemoglobin complexes with significantly higher affinity than haptoglobin alone
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted, cell wall; Peptidoglycan-anchor (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 3 NEAT domains
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ISDH_STAA3 (Q2FG07)
Other databases:
- EMBL: CP000255 - RefSeq: YP_494371.1 - ProteinModelPortal: Q2FG07 - STRING: Q2FG07 - EnsemblBacteria: EBSTAT00000037410 - GeneID: 3913349 - GenomeReviews: CP000255_GR - KEGG: saa:SAUSA300_1677 - GeneTree: EBGT00050000023708 - HOGENOM: HBG215988 - OMA: DKGVDNS - ProtClustDB: CLSK885152 - GO: GO:0016020 - InterPro: IPR005877 - InterPro: IPR019930 - InterPro: IPR019931 - InterPro: IPR006635 - SMART: SM00725 - TIGRFAMs: TIGR03658 - TIGRFAMs: TIGR01167 - TIGRFAMs: TIGR01168
Pfam domain/function: PF05031 NEAT; PF04650 YSIRK_signal
EC number: NA
Molecular weight: Translated: 100935; Mature: 100935
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS50847 GRAM_POS_ANCHORING; PS50978 NEAT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKHHPKLRSFYSIRKSTLGVASVIVSTLFLITSQHQAQAAENTNTSDKISENQNNNATT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHCCCCCCCCC TQPPKDTNQTQPATQPANTAKNYPAADESLKDAIKDPALENKEHDIGPREQVNFQLLDKN CCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCC NETQYYHFFSIKDPADVYYTKKKAEVELDINTASTWKKFEVYENNQKLPVRLVSYSPVPE CCCEEEEEEEECCCCHHEEECCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEECCCCCC DHAYIRFPVSDGTQELKIVSSTQIDDGEETNYDYTKLVFAKPIYNDPSLVKSDTNDAVVT CCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCEECCCCCEEEE NDQSSSVASNQTNTNTSNQNTSTINNANNQPQATTNMSQPAQPKSSTNADQASSQPAHET CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC NSNGNTNDKTNESSNQSDVNQQYPPADESLQDAIKNPAIIDKEHTADNWRPIDFQMKNDK CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEECCCCCCCCCEEEEEEECCCC GERQFYHYASTVEPATVIFTKTGPIIELGLKTASTWKKFEVYEGDKKLPVELVSYDSDKD CCHHHHHHHCCCCCEEEEEECCCCEEEECCCCCCCCCEEEEECCCCCCCEEEEEECCCCC YAYIRFPVSNGTREVKIVSSIEYGENIHEDYDYTLMVFAQPITNNPDDYVDEETYNLQKL EEEEEEECCCCCEEEEEEEECHHCCCCCCCCCEEEEEEEECCCCCCHHHCCCHHHHHHHH LAPYHKAKTLERQVYELEKLQEKLPEKYKAEYKKKLDQTRVELADQVKSAVTEFENVTPT HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC NDQLTDLQEAHFVVFESEENSESVMDGFVEHPFYTATLNGQKYVVMKTKDDSYWKDLIVE CHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCEEEEEECCCEEEEEECCCCHHHHHHHHC GKRVTTVSKDPKNNSRTLIFPYIPDKAVYNAIVKVVVANIGYEGQYHVRIINQDINTKDD CCEEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCC DTSQNNTSEPLNVQTGQEGKVADTDVAENSSTATNPKDASDKADVIEPESDVVKDADNNI CCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCC DKDVQHDVDHLSDMSDNNHFDKYDLKEMDTQIAKDTDRNVDKDADNSVGMSSNVDTDKDS CHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC NKNKDKVIQLNHIADKNNHTGKAAKLDVVKQNYNNTDKVTDKKTTEHLPSDIHKTVDKTV CCCCCCEEEEEECCCCCCCCCCCEEEEHHHCCCCCCCCCCCCHHHHHCHHHHHHHHHHHH KTKEKAGTPSKENKLSQSKMLPKTGETTSSQSWWGLYALLGMLALFIPKFRKESK HHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNKHHPKLRSFYSIRKSTLGVASVIVSTLFLITSQHQAQAAENTNTSDKISENQNNNATT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHCCCCCCCCC TQPPKDTNQTQPATQPANTAKNYPAADESLKDAIKDPALENKEHDIGPREQVNFQLLDKN CCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCC NETQYYHFFSIKDPADVYYTKKKAEVELDINTASTWKKFEVYENNQKLPVRLVSYSPVPE CCCEEEEEEEECCCCHHEEECCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEECCCCCC DHAYIRFPVSDGTQELKIVSSTQIDDGEETNYDYTKLVFAKPIYNDPSLVKSDTNDAVVT CCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCEECCCCCEEEE NDQSSSVASNQTNTNTSNQNTSTINNANNQPQATTNMSQPAQPKSSTNADQASSQPAHET CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC NSNGNTNDKTNESSNQSDVNQQYPPADESLQDAIKNPAIIDKEHTADNWRPIDFQMKNDK CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEECCCCCCCCCEEEEEEECCCC GERQFYHYASTVEPATVIFTKTGPIIELGLKTASTWKKFEVYEGDKKLPVELVSYDSDKD CCHHHHHHHCCCCCEEEEEECCCCEEEECCCCCCCCCEEEEECCCCCCCEEEEEECCCCC YAYIRFPVSNGTREVKIVSSIEYGENIHEDYDYTLMVFAQPITNNPDDYVDEETYNLQKL EEEEEEECCCCCEEEEEEEECHHCCCCCCCCCEEEEEEEECCCCCCHHHCCCHHHHHHHH LAPYHKAKTLERQVYELEKLQEKLPEKYKAEYKKKLDQTRVELADQVKSAVTEFENVTPT HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC NDQLTDLQEAHFVVFESEENSESVMDGFVEHPFYTATLNGQKYVVMKTKDDSYWKDLIVE CHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCEEEEEECCCEEEEEECCCCHHHHHHHHC GKRVTTVSKDPKNNSRTLIFPYIPDKAVYNAIVKVVVANIGYEGQYHVRIINQDINTKDD CCEEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCC DTSQNNTSEPLNVQTGQEGKVADTDVAENSSTATNPKDASDKADVIEPESDVVKDADNNI CCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCC DKDVQHDVDHLSDMSDNNHFDKYDLKEMDTQIAKDTDRNVDKDADNSVGMSSNVDTDKDS CHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC NKNKDKVIQLNHIADKNNHTGKAAKLDVVKQNYNNTDKVTDKKTTEHLPSDIHKTVDKTV CCCCCCEEEEEECCCCCCCCCCCEEEEHHHCCCCCCCCCCCCHHHHHCHHHHHHHHHHHH KTKEKAGTPSKENKLSQSKMLPKTGETTSSQSWWGLYALLGMLALFIPKFRKESK HHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA