Definition | Staphylococcus aureus subsp. aureus COL chromosome, complete genome. |
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Accession | NC_002951 |
Length | 2,809,422 |
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The map label for this gene is iscS2 [H]
Identifier: 57652014
GI number: 57652014
Start: 1804486
End: 1805625
Strand: Reverse
Name: iscS2 [H]
Synonym: SACOL1765
Alternate gene names: 57652014
Gene position: 1805625-1804486 (Counterclockwise)
Preceding gene: 57652016
Following gene: 57652013
Centisome position: 64.27
GC content: 31.58
Gene sequence:
>1140_bases TTGATATATCTAGATAATGCGGCAACGACGAAAGCATTTGAAGAAGTGTTAGATACTTATTTAAAAGTAAATCAATCAAT GTATTATAATCCGAATAGTCCGCATAAAGCTGGTTTGCAGGCAAATCAATTACTACAACAAGCAAAAACCCAAATTAATG CAATGATTAATTCAAAAACAAATTATGATGTTGTATTCACTAGTGGTGCAACTGAATCCAATAATCTTGCTTTAAAAGGT ATTGCCTATCGTAAATTTGATACAGCGAAGGAAATAATTACATCCGTGTTAGAGCATCCGTCCGTATTAGAGGTTGTAAG ATATTTGGAAGCACACGAAGGATTTAAAGTTAAATATGTTGATGTAAAGAAAGATGGCAGTATTAACTTAGAACACTTCA AAGAATTAATGTCAGACAAAGTCGGTTTAGTAACATGTATGTATGTAAATAATGTAACTGGACAAATACAGCCTATTCCA CAAATGGCTAAAGTTATAAAAAATTATCCTAAGGCACATTTTCATGTAGATGCGGTTCAAGCATTCGGCAAAATTTCAAT GGATCTCAATAACATAGATAGTATTAGTTTAAGTGGACACAAGTTTAATGGTTTAAAAGGACAAGGCGTCTTACTTGTAA ATCACATTCAAAATGTTGAACCAACTGTCCATGGTGGTGGTCAAGAATATGGCGTTAGAAGTGGAACAGTTAATTTGCCA AATGATATTGCAATGGTTAAAGCGATGAAGATAGCTAATGAAAACTTTGAAGCATTGAATGCATTTGTTACTGAGTTAAA TAATGACGTCCGTCAATTTTTAAATAAATATCATGGAGTTTATATTAATTCTTCAACTTCAGGTTCACCATTCGTTTTAA ATATTAGTTTTCCTGGCGTAAAAGGTGAAGTATTAGTTAATGCTTTTTCAAAATATGACATTATGATATCTACGACAAGT GCTTGTTCATCTAAACGTAATAAATTAAATGAAGTATTGGCTGCAATGGGATTATCAGACAAATCTATTGAAGGTAGTAT AAGATTATCATTTGGGGCTACTACAACTAAAGAAGATATAGCGAGGTTTAAAGAAATATTTATCATCATTTATGAGGAAA TTAAGGAGTTGCTAAAATAA
Upstream 100 bases:
>100_bases TTATTTTGCGCTATAACCTTTATTTTTTGTCGGATAATAGTATAATGCTTGAGTAAAACAATTTTAACGATTGATGATTA ATGAAAGAGAAGTGTTTATT
Downstream 100 bases:
>100_bases TGAAGTATGATCACTTGCTTGTTAGATACGGGGAGTTAACATTAAAGGGTTCAAATAGAAAGAAATTTGTAAATCAATTA AGAAATAATGTAAATAAGTC
Product: aminotransferase, class V
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MIYLDNAATTKAFEEVLDTYLKVNQSMYYNPNSPHKAGLQANQLLQQAKTQINAMINSKTNYDVVFTSGATESNNLALKG IAYRKFDTAKEIITSVLEHPSVLEVVRYLEAHEGFKVKYVDVKKDGSINLEHFKELMSDKVGLVTCMYVNNVTGQIQPIP QMAKVIKNYPKAHFHVDAVQAFGKISMDLNNIDSISLSGHKFNGLKGQGVLLVNHIQNVEPTVHGGGQEYGVRSGTVNLP NDIAMVKAMKIANENFEALNAFVTELNNDVRQFLNKYHGVYINSSTSGSPFVLNISFPGVKGEVLVNAFSKYDIMISTTS ACSSKRNKLNEVLAAMGLSDKSIEGSIRLSFGATTTKEDIARFKEIFIIIYEEIKELLK
Sequences:
>Translated_379_residues MIYLDNAATTKAFEEVLDTYLKVNQSMYYNPNSPHKAGLQANQLLQQAKTQINAMINSKTNYDVVFTSGATESNNLALKG IAYRKFDTAKEIITSVLEHPSVLEVVRYLEAHEGFKVKYVDVKKDGSINLEHFKELMSDKVGLVTCMYVNNVTGQIQPIP QMAKVIKNYPKAHFHVDAVQAFGKISMDLNNIDSISLSGHKFNGLKGQGVLLVNHIQNVEPTVHGGGQEYGVRSGTVNLP NDIAMVKAMKIANENFEALNAFVTELNNDVRQFLNKYHGVYINSSTSGSPFVLNISFPGVKGEVLVNAFSKYDIMISTTS ACSSKRNKLNEVLAAMGLSDKSIEGSIRLSFGATTTKEDIARFKEIFIIIYEEIKELLK >Mature_379_residues MIYLDNAATTKAFEEVLDTYLKVNQSMYYNPNSPHKAGLQANQLLQQAKTQINAMINSKTNYDVVFTSGATESNNLALKG IAYRKFDTAKEIITSVLEHPSVLEVVRYLEAHEGFKVKYVDVKKDGSINLEHFKELMSDKVGLVTCMYVNNVTGQIQPIP QMAKVIKNYPKAHFHVDAVQAFGKISMDLNNIDSISLSGHKFNGLKGQGVLLVNHIQNVEPTVHGGGQEYGVRSGTVNLP NDIAMVKAMKIANENFEALNAFVTELNNDVRQFLNKYHGVYINSSTSGSPFVLNISFPGVKGEVLVNAFSKYDIMISTTS ACSSKRNKLNEVLAAMGLSDKSIEGSIRLSFGATTTKEDIARFKEIFIIIYEEIKELLK
Specific function: Catalyzes the removal of elemental sulfur from cysteine to produce alanine [H]
COG id: COG1104
COG function: function code E; Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily [H]
Homologues:
Organism=Homo sapiens, GI32307132, Length=383, Percent_Identity=35.509138381201, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI156713448, Length=400, Percent_Identity=28.75, Blast_Score=145, Evalue=4e-35, Organism=Escherichia coli, GI48994898, Length=367, Percent_Identity=37.874659400545, Blast_Score=212, Evalue=4e-56, Organism=Escherichia coli, GI1787970, Length=231, Percent_Identity=26.4069264069264, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI1789175, Length=385, Percent_Identity=23.6363636363636, Blast_Score=81, Evalue=9e-17, Organism=Caenorhabditis elegans, GI25143064, Length=386, Percent_Identity=37.0466321243523, Blast_Score=211, Evalue=4e-55, Organism=Caenorhabditis elegans, GI17533177, Length=315, Percent_Identity=29.8412698412698, Blast_Score=124, Evalue=8e-29, Organism=Saccharomyces cerevisiae, GI6319831, Length=365, Percent_Identity=38.3561643835616, Blast_Score=221, Evalue=1e-58, Organism=Drosophila melanogaster, GI20129463, Length=384, Percent_Identity=36.1979166666667, Blast_Score=211, Evalue=8e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000192 - InterPro: IPR016454 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00266 Aminotran_5 [H]
EC number: =2.8.1.7 [H]
Molecular weight: Translated: 41993; Mature: 41993
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYLDNAATTKAFEEVLDTYLKVNQSMYYNPNSPHKAGLQANQLLQQAKTQINAMINSKT CEEECCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC NYDVVFTSGATESNNLALKGIAYRKFDTAKEIITSVLEHPSVLEVVRYLEAHEGFKVKYV CEEEEEECCCCCCCCEEEEEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEE DVKKDGSINLEHFKELMSDKVGLVTCMYVNNVTGQIQPIPQMAKVIKNYPKAHFHVDAVQ EECCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCEECCHHHHHHHHHCCCCEEEHHHHH AFGKISMDLNNIDSISLSGHKFNGLKGQGVLLVNHIQNVEPTVHGGGQEYGVRSGTVNLP HHHHHEECCCCCCEEEECCCEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC NDIAMVKAMKIANENFEALNAFVTELNNDVRQFLNKYHGVYINSSTSGSPFVLNISFPGV CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCEEEEEECCCC KGEVLVNAFSKYDIMISTTSACSSKRNKLNEVLAAMGLSDKSIEGSIRLSFGATTTKEDI CCHHHEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHH ARFKEIFIIIYEEIKELLK HHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MIYLDNAATTKAFEEVLDTYLKVNQSMYYNPNSPHKAGLQANQLLQQAKTQINAMINSKT CEEECCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC NYDVVFTSGATESNNLALKGIAYRKFDTAKEIITSVLEHPSVLEVVRYLEAHEGFKVKYV CEEEEEECCCCCCCCEEEEEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEE DVKKDGSINLEHFKELMSDKVGLVTCMYVNNVTGQIQPIPQMAKVIKNYPKAHFHVDAVQ EECCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCEECCHHHHHHHHHCCCCEEEHHHHH AFGKISMDLNNIDSISLSGHKFNGLKGQGVLLVNHIQNVEPTVHGGGQEYGVRSGTVNLP HHHHHEECCCCCCEEEECCCEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC NDIAMVKAMKIANENFEALNAFVTELNNDVRQFLNKYHGVYINSSTSGSPFVLNISFPGV CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCEEEEEECCCC KGEVLVNAFSKYDIMISTTSACSSKRNKLNEVLAAMGLSDKSIEGSIRLSFGATTTKEDI CCHHHEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHH ARFKEIFIIIYEEIKELLK HHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]