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The map label for this gene is tpx

Identifier: 57652011

GI number: 57652011

Start: 1801857

End: 1802351

Strand: Reverse

Name: tpx

Synonym: SACOL1762

Alternate gene names: 57652011

Gene position: 1802351-1801857 (Counterclockwise)

Preceding gene: 57652012

Following gene: 57652010

Centisome position: 64.15

GC content: 35.15

Gene sequence:

>495_bases
ATGACTGAAATAACATTCAAAGGTGGACCAATCCACTTAAAAGGTCAACAAATTAATGAAGGTGATTTTGCACCTGATTT
TACAGTGTTAGATAATGACTTAAATCAAGTAACATTAGCAGATTATGCTGGTAAAAAGAAATTAATTAGTGTGGTACCAT
CAATTGATACAGGTGTTTGTGATCAGCAGACTCGCAAATTCAACTCTGATGCTTCTAAAGAAGAGGGGATTGTGCTTACA
ATTTCAGCAGACTTACCATTCGCACAAAAAAGATGGTGCGCTTCAGCAGGTTTAGACAATGTCATTACATTAAGTGACCA
CCGTGACTTATCATTTGGTGAAAACTATGGCGTTGTTATGGAAGAACTTCGCTTATTAGCTCGTGCAGTATTTGTATTAG
ATGCAGATAATAAAGTTGTTTATAAAGAAATCGTTAGTGAAGGTACTGATTTCCCAGATTTTGATGCTGCTTTAGCTGCA
TACAAAAATATTTAA

Upstream 100 bases:

>100_bases
TAAAATTAAATTTGCTTTTGATTAAAGCATGAAAATTGTAATCAAACCATAAATTGTCGTATGATGTAGTTAGAATTTTA
AAATGCAGGAGGTCAAGTAT

Downstream 100 bases:

>100_bases
TCATTAAAGAGATAAATCTTAAAATGTATACATCGTGTCCATCGTTGTCAACAGCATTAAAATAGAATTGTTTTCTATGA
TTGCTAAGACCTATGGGCAC

Product: thiol peroxidase

Products: oxidized thioredoxin; H2O [C]

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MTEITFKGGPIHLKGQQINEGDFAPDFTVLDNDLNQVTLADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASKEEGIVLT
ISADLPFAQKRWCASAGLDNVITLSDHRDLSFGENYGVVMEELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAA
YKNI

Sequences:

>Translated_164_residues
MTEITFKGGPIHLKGQQINEGDFAPDFTVLDNDLNQVTLADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASKEEGIVLT
ISADLPFAQKRWCASAGLDNVITLSDHRDLSFGENYGVVMEELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAA
YKNI
>Mature_163_residues
TEITFKGGPIHLKGQQINEGDFAPDFTVLDNDLNQVTLADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASKEEGIVLTI
SADLPFAQKRWCASAGLDNVITLSDHRDLSFGENYGVVMEELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAY
KNI

Specific function: Has antioxidant activity. Could remove peroxides or H(2)O(2)

COG id: COG2077

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain

Homologues:

Organism=Escherichia coli, GI1787584, Length=163, Percent_Identity=45.398773006135, Blast_Score=140, Evalue=4e-35,

Paralogues:

None

Copy number: 2480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): TPX_STAAC (Q5HF61)

Other databases:

- EMBL:   CP000046
- RefSeq:   YP_186596.1
- ProteinModelPortal:   Q5HF61
- SMR:   Q5HF61
- STRING:   Q5HF61
- PeroxiBase:   6010
- EnsemblBacteria:   EBSTAT00000010759
- GeneID:   3236757
- GenomeReviews:   CP000046_GR
- KEGG:   sac:SACOL1762
- TIGR:   SACOL1762
- eggNOG:   COG2077
- GeneTree:   EBGT00050000023840
- HOGENOM:   HBG493509
- OMA:   VRKFNAQ
- ProtClustDB:   PRK00522
- BioCyc:   SAUR93062:SACOL1762-MONOMER
- HAMAP:   MF_00269
- InterPro:   IPR018219
- InterPro:   IPR002065
- InterPro:   IPR013740
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335
- Gene3D:   G3DSA:3.40.30.10
- PANTHER:   PTHR10681:SF3

Pfam domain/function: PF08534 Redoxin; SSF52833 Thiordxn-like_fd

EC number: 1.11.1.- [C]

Molecular weight: Translated: 18005; Mature: 17874

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: PS51352 THIOREDOXIN_2; PS01265 TPX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEITFKGGPIHLKGQQINEGDFAPDFTVLDNDLNQVTLADYAGKKKLISVVPSIDTGVC
CCEEECCCCCEEEECCCCCCCCCCCCCEEECCCCCEEEEHHHCCCHHEEEECCCCCCCCC
DQQTRKFNSDASKEEGIVLTISADLPFAQKRWCASAGLDNVITLSDHRDLSFGENYGVVM
CHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHH
EELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYKNI
HHHHHHHHHHEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
TEITFKGGPIHLKGQQINEGDFAPDFTVLDNDLNQVTLADYAGKKKLISVVPSIDTGVC
CEEECCCCCEEEECCCCCCCCCCCCCEEECCCCCEEEEHHHCCCHHEEEECCCCCCCCC
DQQTRKFNSDASKEEGIVLTISADLPFAQKRWCASAGLDNVITLSDHRDLSFGENYGVVM
CHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHH
EELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYKNI
HHHHHHHHHHEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: reduced thioredoxin; H2O2 [C]

Specific reaction: reduced thioredoxin + H2O2 = oxidized thioredoxin + H2O [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA