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The map label for this gene is graR [H]

Identifier: 57651500

GI number: 57651500

Start: 740479

End: 741162

Strand: Direct

Name: graR [H]

Synonym: SACOL0716

Alternate gene names: 57651500

Gene position: 740479-741162 (Clockwise)

Preceding gene: 57651499

Following gene: 57651501

Centisome position: 26.36

GC content: 31.29

Gene sequence:

>684_bases
GTGATATGGATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGA
TTTTAATGTTGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGG
ATGTTCAATTACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTA
TCATCTCGTGATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAACCGTTCTATAC
CAATGTATTAATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTT
GGCAAGATGCTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGATCAGACGATTTTCCTGTCCAAAACAGAAATG
ATTATATTAGAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGA
AGCATTTGTTAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATTAGTATGGATAGTG
CAATCGAAACAAAAGTAGGAAAAGGATATATGGCTCATGAATAA

Upstream 100 bases:

>100_bases
AAAAATGATGATTCATGGCTTTGAAGTTGACTGCCGGATTAAAGATTTTCAAAGTCGATTAAAATCAGGAGAAAATATGA
AATATACTAAATGATATTGG

Downstream 100 bases:

>100_bases
TTTGAAATGGGTAGCTTATTTTTTGAAATCTCGCATGAACTGGATATTTTGGATATTGTTTTTAAACTTCCTTATGTTAG
GCATTAGTCTAATCGATTAT

Product: DNA-binding response regulator

Products: NA

Alternate protein names: Glycopeptide resistance-associated protein R [H]

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MIWMQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFL
SSRDNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDQTIFLSKTEM
IILEILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Sequences:

>Translated_227_residues
MIWMQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFL
SSRDNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDQTIFLSKTEM
IILEILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE
>Mature_227_residues
MIWMQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFL
SSRDNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDQTIFLSKTEM
IILEILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Specific function: Member of the two-component regulatory system graR/graS involved in resistance against cationic antimicrobial peptides (CAMPs) [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786599, Length=222, Percent_Identity=28.3783783783784, Blast_Score=120, Evalue=6e-29,
Organism=Escherichia coli, GI1787375, Length=222, Percent_Identity=31.981981981982, Blast_Score=114, Evalue=5e-27,
Organism=Escherichia coli, GI1790860, Length=220, Percent_Identity=30.9090909090909, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1786911, Length=219, Percent_Identity=28.310502283105, Blast_Score=111, Evalue=4e-26,
Organism=Escherichia coli, GI1788394, Length=224, Percent_Identity=28.5714285714286, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1789809, Length=229, Percent_Identity=28.3842794759825, Blast_Score=104, Evalue=5e-24,
Organism=Escherichia coli, GI1790552, Length=224, Percent_Identity=28.5714285714286, Blast_Score=100, Evalue=7e-23,
Organism=Escherichia coli, GI1789402, Length=227, Percent_Identity=32.15859030837, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI2367329, Length=226, Percent_Identity=29.646017699115, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1786784, Length=226, Percent_Identity=29.2035398230088, Blast_Score=94, Evalue=8e-21,
Organism=Escherichia coli, GI1790863, Length=230, Percent_Identity=27.8260869565217, Blast_Score=94, Evalue=9e-21,
Organism=Escherichia coli, GI87082012, Length=220, Percent_Identity=26.3636363636364, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1787229, Length=224, Percent_Identity=24.1071428571429, Blast_Score=84, Evalue=6e-18,
Organism=Escherichia coli, GI145693140, Length=230, Percent_Identity=28.695652173913, Blast_Score=78, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26510; Mature: 26510

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIWMQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKY
CEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCC
DGFYWCRKMREVSNVPILFLSSRDNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRR
CCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHH
VYEFTAEEKRTLTWQDAVVDLSKDSIQKGDQTIFLSKTEMIILEILITKKNQIVSRDTII
HHHHHHHHCCEEEHHHHHEECCHHHHCCCCCEEEEECHHEEEEEEEHHCCCCEEECCEEE
TALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE
EEEECCCEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MIWMQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKY
CEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCC
DGFYWCRKMREVSNVPILFLSSRDNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRR
CCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHH
VYEFTAEEKRTLTWQDAVVDLSKDSIQKGDQTIFLSKTEMIILEILITKKNQIVSRDTII
HHHHHHHHCCEEEHHHHHEECCHHHHCCCCCEEEEECHHEEEEEEEHHCCCCEEECCEEE
TALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE
EEEECCCEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA