Click here to switch to the map view.

The map label for this gene is yabB [H]

Identifier: 57651368

GI number: 57651368

Start: 539952

End: 540677

Strand: Direct

Name: yabB [H]

Synonym: SACOL0529

Alternate gene names: 57651368

Gene position: 539952-540677 (Clockwise)

Preceding gene: 57651367

Following gene: 57651369

Centisome position: 19.22

GC content: 33.61

Gene sequence:

>726_bases
ATGTTAAAAGAGAATGAACGATTTGATCAACTAATCAAAGAAGATTTTAGTATTATTCAAAATGATGATGTTTTTTCATT
TTCAACGGATGCTTTGTTGTTAGGGCATTTTACAAAACCTAGAACAAAAGATATTGTGTTGGACTTATGTTCAGGCAATG
GGGTGATACCCTTGTTATTGTTTGCGAAACATCCACGACATATAGAAGGTGTTGAGATTCAAAAAACACTTGTCGATATG
GCGCGACGCACATTTCAATTCAATGATGTTGATGAATATTTAACAATGCATCACATGGATTTGAAAAACGTTACTAAAGT
ATTTAAACCTTCACAATATACTTTAGTAACGTGTAATCCGCCTTATTTTAAAGAGAATCAGCAACACCAACATCAAAAAG
AAGCACATAAGATAGCGAGACATGAGATTATGTGTACACTTGAAGATTGCATGATTGCAGCCCGTCATTTATTAAAAGAA
GGTGGCAGGCTAAACATGGTACATCGTGCAGAGAGACTAATGGATGTCTTGTTTGAAATGAGAAAAGTGAATATTGAACC
TAAGAAAGTCGTTTTTATATATAGTAAAGTAGGGAAATCAGCACAAACGATAGTAGTAGAAGGTCGAAAAGGTGGAAATC
AAGGTTTAGAAATCATGCCCCCATTTTATATTTATAATGAAGATGGTAATTATAGCGAAGAAATGAAGGAAGTATATTAT
GGATAG

Upstream 100 bases:

>100_bases
CTGTTAAAAGTCAAAAATACATCGAATGTAGTTAGGCATATAATATAAAAAGAGTTTTCAATTACTCAATAGAAAAAGGT
TGTCTTCATAGGAGTTAAAA

Downstream 100 bases:

>100_bases
TCATTTTGTATATATTGTAAAATGTAGTGATGGAAGTTTATATACAGGATACGCTAAAGACGTTAATGCACGTGTTGAAA
AACATAACCGAGGTCAAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MLKENERFDQLIKEDFSIIQNDDVFSFSTDALLLGHFTKPRTKDIVLDLCSGNGVIPLLLFAKHPRHIEGVEIQKTLVDM
ARRTFQFNDVDEYLTMHHMDLKNVTKVFKPSQYTLVTCNPPYFKENQQHQHQKEAHKIARHEIMCTLEDCMIAARHLLKE
GGRLNMVHRAERLMDVLFEMRKVNIEPKKVVFIYSKVGKSAQTIVVEGRKGGNQGLEIMPPFYIYNEDGNYSEEMKEVYY
G

Sequences:

>Translated_241_residues
MLKENERFDQLIKEDFSIIQNDDVFSFSTDALLLGHFTKPRTKDIVLDLCSGNGVIPLLLFAKHPRHIEGVEIQKTLVDM
ARRTFQFNDVDEYLTMHHMDLKNVTKVFKPSQYTLVTCNPPYFKENQQHQHQKEAHKIARHEIMCTLEDCMIAARHLLKE
GGRLNMVHRAERLMDVLFEMRKVNIEPKKVVFIYSKVGKSAQTIVVEGRKGGNQGLEIMPPFYIYNEDGNYSEEMKEVYY
G
>Mature_241_residues
MLKENERFDQLIKEDFSIIQNDDVFSFSTDALLLGHFTKPRTKDIVLDLCSGNGVIPLLLFAKHPRHIEGVEIQKTLVDM
ARRTFQFNDVDEYLTMHHMDLKNVTKVFKPSQYTLVTCNPPYFKENQQHQHQKEAHKIARHEIMCTLEDCMIAARHLLKE
GGRLNMVHRAERLMDVLFEMRKVNIEPKKVVFIYSKVGKSAQTIVVEGRKGGNQGLEIMPPFYIYNEDGNYSEEMKEVYY
G

Specific function: Unknown

COG id: COG4123

COG function: function code R; Predicted O-methyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS [H]

EC number: NA

Molecular weight: Translated: 28097; Mature: 28097

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKENERFDQLIKEDFSIIQNDDVFSFSTDALLLGHFTKPRTKDIVLDLCSGNGVIPLLL
CCCCCHHHHHHHHHHHHHHCCCCCEEECCCEEEEECCCCCCCCEEEEEECCCCCEEEEEE
FAKHPRHIEGVEIQKTLVDMARRTFQFNDVDEYLTMHHMDLKNVTKVFKPSQYTLVTCNP
EECCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHCCCCEEEEEECC
PYFKENQQHQHQKEAHKIARHEIMCTLEDCMIAARHLLKEGGRLNMVHRAERLMDVLFEM
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
RKVNIEPKKVVFIYSKVGKSAQTIVVEGRKGGNQGLEIMPPFYIYNEDGNYSEEMKEVYY
HHCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCEECCCEEEECCCCCHHHHHHHHHC
G
C
>Mature Secondary Structure
MLKENERFDQLIKEDFSIIQNDDVFSFSTDALLLGHFTKPRTKDIVLDLCSGNGVIPLLL
CCCCCHHHHHHHHHHHHHHCCCCCEEECCCEEEEECCCCCCCCEEEEEECCCCCEEEEEE
FAKHPRHIEGVEIQKTLVDMARRTFQFNDVDEYLTMHHMDLKNVTKVFKPSQYTLVTCNP
EECCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHCCCCEEEEEECC
PYFKENQQHQHQKEAHKIARHEIMCTLEDCMIAARHLLKEGGRLNMVHRAERLMDVLFEM
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
RKVNIEPKKVVFIYSKVGKSAQTIVVEGRKGGNQGLEIMPPFYIYNEDGNYSEEMKEVYY
HHCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCEECCCEEEECCCCCHHHHHHHHHC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]