| Definition | Staphylococcus aureus subsp. aureus COL chromosome, complete genome. |
|---|---|
| Accession | NC_002951 |
| Length | 2,809,422 |
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The map label for this gene is 57651295
Identifier: 57651295
GI number: 57651295
Start: 375923
End: 377161
Strand: Direct
Name: 57651295
Synonym: SACOL0368
Alternate gene names: NA
Gene position: 375923-377161 (Clockwise)
Preceding gene: 57651294
Following gene: 57651296
Centisome position: 13.38
GC content: 32.69
Gene sequence:
>1239_bases GTGAATGTTATCGCAAAAGAGAATATTGTCACACGCATAAAGAAAAAATTGATAGACAATTGGATTGATCAGTCAACTTC TAAGCTTTATGACTTTAGCCCATGGAAAAATAGATCTTTTTGGGGTGTAATTAATAATACGCTTGAAACTAATGAAACGA TATTTTCAGCTATTACAAAGTTATCTAATTCGATGGCTAGTTTGCCCTTGAAAATGTATGAAGATTATAAAGTAGTTAAT ACAGAAGTATCTGATTTACTTACAGTGTCACCGAATAATTCTCTGAGCAGTTTTGATTTTATTAATCAAATTGAAACAAT CAGAAATGAAAAAGGTAATGCATATGTGCTAATTGAACGAGACATCTATCATCAACCATCAAAGCTTTTCTTATTAAATC CAGATGTTGTTGAAATGTTAATTGAAAACCAATCACGTGAACTTTATTATTCCATTCATGCTGCAACTGGAAATAAATTG ATTGTTCATAATATGGACATGTTGCATTTTAAACACATCGTGGCATCTAATATGGTGCAAGGCATTAGTCCGATTGATGT GTTGAAGAATACAACTGATTTTGATAATGCAGTAAGAACCTTTAATCTTACAGAAATGCAAAAACCTGATTCTTTCATGC TTAAATATGGTTCCAATGTAGGTAAAGAAAAAAGGCAGCAAGTGTTAGAAGATTTCAAACAGTACTATGAAGAAAACGGT GGAATATTATTCCAAGAGCCTGGTGTTGAAATCGAACCGTTACCTAAAAAATATGTCTCTGAAGATATAGTGGCAAGCGA GAATTTAACAAGAGAAAGAGTAGCTAACGTTTTTCAATTGCCCTCAGTATTCTTAAATGCAAGATCAAATACAAATTTCG CGAAAAATGAAGAGTTAAACAGATTTTACTTGCAGCATACCTTATTGCCAATCGTCAAACAGTATGAAGAAGAATTTAAT CGGAAACTACTTACTAAAACAGACAGAGAAAAAAATAGGTATTTTAAATTTAACGTTAAATCTTATTTAAGGGCTGATAG TGCAACACAAGCAGAAGTGTACTTTAAAGCAGTTCGTAGTGGTTACTACACTATAAATGACATTAGAGAGTGGGAGGATT TACCACCAGTTGAAGGTGGAGATAAGCCGCTAATAAGCGGTGATTTATACCCAATTGACACGCCACTTGAATTAAGAAAA TCTTTGAAAGGTGGTGATAAAAATGTCAATGAAAGCTAA
Upstream 100 bases:
>100_bases TTTTTAAACACATATACAGATATTATGAATAAAGTTGTTTCTGATAGTGGTGAAGGAAACATAGAGTTTATTAGTATTAA AGACATAATGCGTTAAGGAG
Downstream 100 bases:
>100_bases GTATTTTCAAATGAAAAGAAAATCAAAAAGTAAAGGTGAAATATTTATTTATGGTGATATTGTAAGTGATAAATGGTTTG AAAGTGATGTAACTGCTACA
Product: prophage L54a, HK97 family portal protein
Products: NA
Alternate protein names: HK97 Family Phage Portal Protein; Portal Protein; HK97 Family Portal Protein; Phage Portal Protein HK; Phage-Related Head Portal Protein; Head Portal Protein; Phage Capsid Protein HK; Phage Related Head Portal Protein; Phage Portal; Prophage; Phage-Like Protein; Bacteriophage Portal Protein; HK97 Family Portal Protein
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues MNVIAKENIVTRIKKKLIDNWIDQSTSKLYDFSPWKNRSFWGVINNTLETNETIFSAITKLSNSMASLPLKMYEDYKVVN TEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERDIYHQPSKLFLLNPDVVEMLIENQSRELYYSIHAATGNKL IVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFNLTEMQKPDSFMLKYGSNVGKEKRQQVLEDFKQYYEENG GILFQEPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSVFLNARSNTNFAKNEELNRFYLQHTLLPIVKQYEEEFN RKLLTKTDREKNRYFKFNVKSYLRADSATQAEVYFKAVRSGYYTINDIREWEDLPPVEGGDKPLISGDLYPIDTPLELRK SLKGGDKNVNES
Sequences:
>Translated_412_residues MNVIAKENIVTRIKKKLIDNWIDQSTSKLYDFSPWKNRSFWGVINNTLETNETIFSAITKLSNSMASLPLKMYEDYKVVN TEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERDIYHQPSKLFLLNPDVVEMLIENQSRELYYSIHAATGNKL IVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFNLTEMQKPDSFMLKYGSNVGKEKRQQVLEDFKQYYEENG GILFQEPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSVFLNARSNTNFAKNEELNRFYLQHTLLPIVKQYEEEFN RKLLTKTDREKNRYFKFNVKSYLRADSATQAEVYFKAVRSGYYTINDIREWEDLPPVEGGDKPLISGDLYPIDTPLELRK SLKGGDKNVNES >Mature_412_residues MNVIAKENIVTRIKKKLIDNWIDQSTSKLYDFSPWKNRSFWGVINNTLETNETIFSAITKLSNSMASLPLKMYEDYKVVN TEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERDIYHQPSKLFLLNPDVVEMLIENQSRELYYSIHAATGNKL IVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFNLTEMQKPDSFMLKYGSNVGKEKRQQVLEDFKQYYEENG GILFQEPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSVFLNARSNTNFAKNEELNRFYLQHTLLPIVKQYEEEFN RKLLTKTDREKNRYFKFNVKSYLRADSATQAEVYFKAVRSGYYTINDIREWEDLPPVEGGDKPLISGDLYPIDTPLELRK SLKGGDKNVNES
Specific function: Unknown
COG id: COG4695
COG function: function code S; Phage-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47729; Mature: 47729
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVIAKENIVTRIKKKLIDNWIDQSTSKLYDFSPWKNRSFWGVINNTLETNETIFSAITK CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHH LSNSMASLPLKMYEDYKVVNTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIER HHHHHHHCCHHHHCCCEEECCCHHHEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEEH DIYHQPSKLFLLNPDVVEMLIENQSRELYYSIHAATGNKLIVHNMDMLHFKHIVASNMVQ HCCCCCCEEEEECHHHHHHHHHCCCCEEEEEEEECCCCEEEEECCHHHHHHHHHHHHHHH GISPIDVLKNTTDFDNAVRTFNLTEMQKPDSFMLKYGSNVGKEKRQQVLEDFKQYYEENG CCCHHHHHCCCCCHHHHHHEECCHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC GILFQEPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSVFLNARSNTNFAKNEELN CEEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH RFYLQHTLLPIVKQYEEEFNRKLLTKTDREKNRYFKFNVKSYLRADSATQAEVYFKAVRS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHCCCCHHHHHHHHHHHC GYYTINDIREWEDLPPVEGGDKPLISGDLYPIDTPLELRKSLKGGDKNVNES CCEEEHHHHHHHCCCCCCCCCCCEECCCCCCCCCCHHHHHHHCCCCCCCCCC >Mature Secondary Structure MNVIAKENIVTRIKKKLIDNWIDQSTSKLYDFSPWKNRSFWGVINNTLETNETIFSAITK CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHH LSNSMASLPLKMYEDYKVVNTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIER HHHHHHHCCHHHHCCCEEECCCHHHEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEEH DIYHQPSKLFLLNPDVVEMLIENQSRELYYSIHAATGNKLIVHNMDMLHFKHIVASNMVQ HCCCCCCEEEEECHHHHHHHHHCCCCEEEEEEEECCCCEEEEECCHHHHHHHHHHHHHHH GISPIDVLKNTTDFDNAVRTFNLTEMQKPDSFMLKYGSNVGKEKRQQVLEDFKQYYEENG CCCHHHHHCCCCCHHHHHHEECCHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC GILFQEPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSVFLNARSNTNFAKNEELN CEEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH RFYLQHTLLPIVKQYEEEFNRKLLTKTDREKNRYFKFNVKSYLRADSATQAEVYFKAVRS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHCCCCHHHHHHHHHHHC GYYTINDIREWEDLPPVEGGDKPLISGDLYPIDTPLELRKSLKGGDKNVNES CCEEEHHHHHHHCCCCCCCCCCCEECCCCCCCCCCHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA