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The map label for this gene is dnaB [H]

Identifier: 57651270

GI number: 57651270

Start: 365904

End: 367145

Strand: Direct

Name: dnaB [H]

Synonym: SACOL0343

Alternate gene names: 57651270

Gene position: 365904-367145 (Clockwise)

Preceding gene: 57651269

Following gene: 57651271

Centisome position: 13.02

GC content: 36.55

Gene sequence:

>1242_bases
ATGAATTATGGACAATTTGAAATTGAAAGCACAATAATCGCTACGCTGCTCAAACAACCGGACGTACTAGAAAAGATACG
AGTTAAAGATTATATGTTTACGAACGAAAAGTTTAAAACCTTTTTCAATTATGTAATGGACGTCGGAAAGATAGATCATC
AAGAAATTTATTTAAAAGCAACTAAAGATAAAGAATTTTTAGATGCAGATACTATAACTAAACTTTATAACTCCGATTTC
ATTGGATACGGTTTCTTTGAACGTTATCAACAAGAATTATTGGAAAGTTATCAACTCAACAAAGCTAACGAATTGGTAAC
TGAGTTCAAACAACAACCTACGAATCAAAACTTTAACAACTTGATTGATGAACTCAAGGATTTAAAAACGATTACTAACA
AAAAAGAAGATGGAACCAAGAAGTTTGTTGAGGAGTTTGTCGAAGAGTTATACAGCGATAGCCCTAAGAAGCAAATTAAG
ACGGGTTACAAGCTAATGGATTACAAAATAGGGGGATTAGAGCCATCACAATTAATCGTCATCGCAGCGCGTCCCTCAGT
GGGTAAGACAGGCTTTGCATTAAACATGATGCTGAACATAGCACAAAATGGATACAAAACATCTTTCTTTAGTCTCGAAA
CAACCGGCACATCGGTATTGAAACGTATGTTATCAACAATTACTGGTATTGAGTTAACAAAGATAAAAGAAATCAGGAAC
TTAACGCCGGATGACTTAACAAAGTTAACGAATGCGATGGATAAAATCATGAAATTAGGCATCGATATTTCTGATAAAAG
TAATATCACACCGCAAGATGTGCGAGCGCAAGCAATGAGGCATTCAGACGGGCAACAAGTTATTTTTATAGATTACCTTC
AACTGATGGATACTGATGCGAAAGTTGATAGACGTGTAGCAGTAGAAAAGATATCACGCGACTTAAAGATAATCGCTAAC
GAGACAGGCGCAATCATTGTACTACTTTCACAACTGAATCGTGGAGTCGAGTCTAGGCAGGATAAACGACCAATGCTATC
GGACATGAAAGAATCAGGCGGAATAGAGGCAGATGCGAGTTTAGCAATGCTACTTTACCGTGATGATTATTATAACCGTG
ACGAAGATGACAGTATCACAGGCAAATCTATTGTTGAATGTAACATAGCCAAAAACAAAGACGGCGAAACCGGAATAATT
GAATTCGAGTATTACAAGAAGACGCAGAGGTTTTTCACATGA

Upstream 100 bases:

>100_bases
ACCAATGGAAAATGCAGAATGACCCCGAATATGTCAAACAAAGAAAAATAGCGCTAGATAACTTCATGAATAAGTTGGCA
GAATTTGGGGGCGATAACGA

Downstream 100 bases:

>100_bases
ACACCATGCAATTCAAAAGCTTATTGAAATCGATGTATGAAGAGACAAAGCAAAACGACCCGATTGTAGCAAATGTCTAT
ATAGAAACTGGTTGGGCAGT

Product: prophage L54a, replicative DNA helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MNYGQFEIESTIIATLLKQPDVLEKIRVKDYMFTNEKFKTFFNYVMDVGKIDHQEIYLKATKDKEFLDADTITKLYNSDF
IGYGFFERYQQELLESYQLNKANELVTEFKQQPTNQNFNNLIDELKDLKTITNKKEDGTKKFVEEFVEELYSDSPKKQIK
TGYKLMDYKIGGLEPSQLIVIAARPSVGKTGFALNMMLNIAQNGYKTSFFSLETTGTSVLKRMLSTITGIELTKIKEIRN
LTPDDLTKLTNAMDKIMKLGIDISDKSNITPQDVRAQAMRHSDGQQVIFIDYLQLMDTDAKVDRRVAVEKISRDLKIIAN
ETGAIIVLLSQLNRGVESRQDKRPMLSDMKESGGIEADASLAMLLYRDDYYNRDEDDSITGKSIVECNIAKNKDGETGII
EFEYYKKTQRFFT

Sequences:

>Translated_413_residues
MNYGQFEIESTIIATLLKQPDVLEKIRVKDYMFTNEKFKTFFNYVMDVGKIDHQEIYLKATKDKEFLDADTITKLYNSDF
IGYGFFERYQQELLESYQLNKANELVTEFKQQPTNQNFNNLIDELKDLKTITNKKEDGTKKFVEEFVEELYSDSPKKQIK
TGYKLMDYKIGGLEPSQLIVIAARPSVGKTGFALNMMLNIAQNGYKTSFFSLETTGTSVLKRMLSTITGIELTKIKEIRN
LTPDDLTKLTNAMDKIMKLGIDISDKSNITPQDVRAQAMRHSDGQQVIFIDYLQLMDTDAKVDRRVAVEKISRDLKIIAN
ETGAIIVLLSQLNRGVESRQDKRPMLSDMKESGGIEADASLAMLLYRDDYYNRDEDDSITGKSIVECNIAKNKDGETGII
EFEYYKKTQRFFT
>Mature_413_residues
MNYGQFEIESTIIATLLKQPDVLEKIRVKDYMFTNEKFKTFFNYVMDVGKIDHQEIYLKATKDKEFLDADTITKLYNSDF
IGYGFFERYQQELLESYQLNKANELVTEFKQQPTNQNFNNLIDELKDLKTITNKKEDGTKKFVEEFVEELYSDSPKKQIK
TGYKLMDYKIGGLEPSQLIVIAARPSVGKTGFALNMMLNIAQNGYKTSFFSLETTGTSVLKRMLSTITGIELTKIKEIRN
LTPDDLTKLTNAMDKIMKLGIDISDKSNITPQDVRAQAMRHSDGQQVIFIDYLQLMDTDAKVDRRVAVEKISRDLKIIAN
ETGAIIVLLSQLNRGVESRQDKRPMLSDMKESGGIEADASLAMLLYRDDYYNRDEDDSITGKSIVECNIAKNKDGETGII
EFEYYKKTQRFFT

Specific function: Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with dnaC protein, primase, and other prepriming proteins [

COG id: COG0305

COG function: function code L; Replicative DNA helicase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SF4 helicase domain [H]

Homologues:

Organism=Escherichia coli, GI1790486, Length=259, Percent_Identity=40.1544401544402, Blast_Score=174, Evalue=1e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR007692
- InterPro:   IPR007694
- InterPro:   IPR007693
- InterPro:   IPR016136 [H]

Pfam domain/function: PF00772 DnaB; PF03796 DnaB_C [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 47462; Mature: 47462

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYGQFEIESTIIATLLKQPDVLEKIRVKDYMFTNEKFKTFFNYVMDVGKIDHQEIYLKA
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEE
TKDKEFLDADTITKLYNSDFIGYGFFERYQQELLESYQLNKANELVTEFKQQPTNQNFNN
CCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHH
LIDELKDLKTITNKKEDGTKKFVEEFVEELYSDSPKKQIKTGYKLMDYKIGGLEPSQLIV
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCEEEEEEECCCCCCCEEE
IAARPSVGKTGFALNMMLNIAQNGYKTSFFSLETTGTSVLKRMLSTITGIELTKIKEIRN
EEECCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHC
LTPDDLTKLTNAMDKIMKLGIDISDKSNITPQDVRAQAMRHSDGQQVIFIDYLQLMDTDA
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEHHHHHCCCH
KVDRRVAVEKISRDLKIIANETGAIIVLLSQLNRGVESRQDKRPMLSDMKESGGIEADAS
HHHHHHHHHHHHCCCEEEECCCCCEEEEHHHHHCCHHHHHCCCHHHHHHHHHCCCCCCCC
LAMLLYRDDYYNRDEDDSITGKSIVECNIAKNKDGETGIIEFEYYKKTQRFFT
EEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEHHHHHHHHCCC
>Mature Secondary Structure
MNYGQFEIESTIIATLLKQPDVLEKIRVKDYMFTNEKFKTFFNYVMDVGKIDHQEIYLKA
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEE
TKDKEFLDADTITKLYNSDFIGYGFFERYQQELLESYQLNKANELVTEFKQQPTNQNFNN
CCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHH
LIDELKDLKTITNKKEDGTKKFVEEFVEELYSDSPKKQIKTGYKLMDYKIGGLEPSQLIV
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCEEEEEEECCCCCCCEEE
IAARPSVGKTGFALNMMLNIAQNGYKTSFFSLETTGTSVLKRMLSTITGIELTKIKEIRN
EEECCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHC
LTPDDLTKLTNAMDKIMKLGIDISDKSNITPQDVRAQAMRHSDGQQVIFIDYLQLMDTDA
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEHHHHHCCCH
KVDRRVAVEKISRDLKIIANETGAIIVLLSQLNRGVESRQDKRPMLSDMKESGGIEADAS
HHHHHHHHHHHHCCCEEEECCCCCEEEEHHHHHCCHHHHHCCCHHHHHHHHHCCCCCCCC
LAMLLYRDDYYNRDEDDSITGKSIVECNIAKNKDGETGIIEFEYYKKTQRFFT
EEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]