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The map label for this gene is ydeD [H]

Identifier: 57651044

GI number: 57651044

Start: 2605650

End: 2606612

Strand: Direct

Name: ydeD [H]

Synonym: SACOL2548

Alternate gene names: 57651044

Gene position: 2605650-2606612 (Clockwise)

Preceding gene: 57651043

Following gene: 57651053

Centisome position: 92.75

GC content: 34.68

Gene sequence:

>963_bases
ATGTTGTTGGTGTTAAGTTTTAAAGGGGTGAGATACTTGGCGAATAATCATTCAGCTTTGCGTTTAAAAGGAATTATACT
TGCCATTGTCGGTGCTTGTTTATGGGGATTAGGTGGTACTGTTTCTGATTTCTTGTTCAAATATAAGAATATTAATGTCG
ATTGGTACGTCACTGCTCGACTTGTAGTCAGTGGTGTTTTCTTACTTATTATGTACAAAATGATGCAACCCAAACGTTCA
ATATTTAGCGTATTCCAAGATCGACGTATGTTAGGCAAATTACTTATCTTCAGTATACTGGGCATGTTAGTAGTACAATA
TGCTTATATGGCATCTATTAATACAGGTAATGCTGCGATTGCAACATTACTACAATACATTGCGCCAGTTTATATTATTA
TTTGGTTTGTCATAAGAGGCGTTGCAAAACTAACATTATTTGATGTGCTTGCTATTATCATGACACTATTAGGAACATTT
TTATTATTAACAAATGGTTCATTTTCTAATTTAGTCGTCAATCCTGCAAGTTTATTCTGGGGTATTTTAGCTGGTGTAGC
ACTCGCTTTTTACACAATTTATCCTTCAGACCTACTTAACCGCTTCGGTTCGATTCTAATTGTCGGGTGGGCAATGCTTA
TTTCTGGTGTTGCGATGAATTTACGCCATCCAATTTGGCACATTGATATCACTAAATGGGACATATCAATTATATTATTT
TTAATCTTTGGTATTATCGGTGGTACCGCACTCGCATTTTATTTCTTTATCGACAGTTTACAATACATATCAGCGAAAGA
AACAACATTATTCGGAACTGTTGAACCTGTCGTAGCCGTTATCGCAAGCAGTCTATGGTTACATGTGGCATTCAAACCAT
TTCAAATCGTAGGCATCATTCTTATTATGATTTTAATTTTATTACTATCACTTAAAAGACAACCTGAAACATTAGATGAA
TAA

Upstream 100 bases:

>100_bases
TAGACCACTACATCTTAGATGATTTTTTTATTTTCTCATTTCACTCTTTCTTAAAAGTCGATATAATGAATTAAATCATT
ATCATACACCGACATATTTT

Downstream 100 bases:

>100_bases
GAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTAT
TTTAGTTAATAATATTTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MLLVLSFKGVRYLANNHSALRLKGIILAIVGACLWGLGGTVSDFLFKYKNINVDWYVTARLVVSGVFLLIMYKMMQPKRS
IFSVFQDRRMLGKLLIFSILGMLVVQYAYMASINTGNAAIATLLQYIAPVYIIIWFVIRGVAKLTLFDVLAIIMTLLGTF
LLLTNGSFSNLVVNPASLFWGILAGVALAFYTIYPSDLLNRFGSILIVGWAMLISGVAMNLRHPIWHIDITKWDISIILF
LIFGIIGGTALAFYFFIDSLQYISAKETTLFGTVEPVVAVIASSLWLHVAFKPFQIVGIILIMILILLLSLKRQPETLDE

Sequences:

>Translated_320_residues
MLLVLSFKGVRYLANNHSALRLKGIILAIVGACLWGLGGTVSDFLFKYKNINVDWYVTARLVVSGVFLLIMYKMMQPKRS
IFSVFQDRRMLGKLLIFSILGMLVVQYAYMASINTGNAAIATLLQYIAPVYIIIWFVIRGVAKLTLFDVLAIIMTLLGTF
LLLTNGSFSNLVVNPASLFWGILAGVALAFYTIYPSDLLNRFGSILIVGWAMLISGVAMNLRHPIWHIDITKWDISIILF
LIFGIIGGTALAFYFFIDSLQYISAKETTLFGTVEPVVAVIASSLWLHVAFKPFQIVGIILIMILILLLSLKRQPETLDE
>Mature_320_residues
MLLVLSFKGVRYLANNHSALRLKGIILAIVGACLWGLGGTVSDFLFKYKNINVDWYVTARLVVSGVFLLIMYKMMQPKRS
IFSVFQDRRMLGKLLIFSILGMLVVQYAYMASINTGNAAIATLLQYIAPVYIIIWFVIRGVAKLTLFDVLAIIMTLLGTF
LLLTNGSFSNLVVNPASLFWGILAGVALAFYTIYPSDLLNRFGSILIVGWAMLISGVAMNLRHPIWHIDITKWDISIILF
LIFGIIGGTALAFYFFIDSLQYISAKETTLFGTVEPVVAVIASSLWLHVAFKPFQIVGIILIMILILLLSLKRQPETLDE

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1790092, Length=302, Percent_Identity=31.7880794701987, Blast_Score=159, Evalue=2e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 35702; Mature: 35702

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLVLSFKGVRYLANNHSALRLKGIILAIVGACLWGLGGTVSDFLFKYKNINVDWYVTAR
CEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEHHHHHH
LVVSGVFLLIMYKMMQPKRSIFSVFQDRRMLGKLLIFSILGMLVVQYAYMASINTGNAAI
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
ATLLQYIAPVYIIIWFVIRGVAKLTLFDVLAIIMTLLGTFLLLTNGSFSNLVVNPASLFW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECHHHHHH
GILAGVALAFYTIYPSDLLNRFGSILIVGWAMLISGVAMNLRHPIWHIDITKWDISIILF
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHH
LIFGIIGGTALAFYFFIDSLQYISAKETTLFGTVEPVVAVIASSLWLHVAFKPFQIVGII
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LIMILILLLSLKRQPETLDE
HHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MLLVLSFKGVRYLANNHSALRLKGIILAIVGACLWGLGGTVSDFLFKYKNINVDWYVTAR
CEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEHHHHHH
LVVSGVFLLIMYKMMQPKRSIFSVFQDRRMLGKLLIFSILGMLVVQYAYMASINTGNAAI
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
ATLLQYIAPVYIIIWFVIRGVAKLTLFDVLAIIMTLLGTFLLLTNGSFSNLVVNPASLFW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECHHHHHH
GILAGVALAFYTIYPSDLLNRFGSILIVGWAMLISGVAMNLRHPIWHIDITKWDISIILF
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHH
LIFGIIGGTALAFYFFIDSLQYISAKETTLFGTVEPVVAVIASSLWLHVAFKPFQIVGII
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LIMILILLLSLKRQPETLDE
HHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]