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The map label for this gene is 57650848

Identifier: 57650848

GI number: 57650848

Start: 2322604

End: 2323044

Strand: Direct

Name: 57650848

Synonym: SACOL2256

Alternate gene names: NA

Gene position: 2322604-2323044 (Clockwise)

Preceding gene: 57650844

Following gene: 57650849

Centisome position: 82.67

GC content: 31.97

Gene sequence:

>441_bases
ATGCTATCACAAGAATTTTTCAATAGTTTTATAACAATATATCGCCCCTATTTAAAATTAGCCGAGCCGATTTTAGAAAA
ACACAATATATATTATGGCCAATGGTTAATCTTACGCGATATCGCTAAACATCAGCCCACTACTCTCATTGAAATTTCAC
ATAGACGTGCAATTGAAAAGCCTACTGCAAGAAAAACTTTAAAAGCTCTAATAGAAAATGACCTTATAACAGTAGAAAAC
AGTTTAGAGGATAAACGACAAAAGTTTTTAACTTTAACACCTAAAGGGCATGAATTATATGAGATTGTTTGTCTTGATGT
ACAAAAGCTCCAACAAGCAGTAGTTGCCAAAACAAACATTTCGCAAGATCAAATGCAAGAAACCATAAATGTGATGAATC
AAATTCATGAAATATTATTAAAGGAGGCACACAATGACTAA

Upstream 100 bases:

>100_bases
TTAATAATTATATATTGATTTCTAATTGCTCCCGTTTTATAATTACTATTGTTGTAAAAAAGTTAGCTAAGCTAACTATT
TTGTCTTAGGAGATGTCACT

Downstream 100 bases:

>100_bases
TCAAGGCTCATTAAATAAATCACCTATTTTCACCAAAAGTTTTACAATTAACTTTTTAGTCAACTTTATCGTATACCTAT
GCATGTATTTGTTACTTGTA

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MLSQEFFNSFITIYRPYLKLAEPILEKHNIYYGQWLILRDIAKHQPTTLIEISHRRAIEKPTARKTLKALIENDLITVEN
SLEDKRQKFLTLTPKGHELYEIVCLDVQKLQQAVVAKTNISQDQMQETINVMNQIHEILLKEAHND

Sequences:

>Translated_146_residues
MLSQEFFNSFITIYRPYLKLAEPILEKHNIYYGQWLILRDIAKHQPTTLIEISHRRAIEKPTARKTLKALIENDLITVEN
SLEDKRQKFLTLTPKGHELYEIVCLDVQKLQQAVVAKTNISQDQMQETINVMNQIHEILLKEAHND
>Mature_146_residues
MLSQEFFNSFITIYRPYLKLAEPILEKHNIYYGQWLILRDIAKHQPTTLIEISHRRAIEKPTARKTLKALIENDLITVEN
SLEDKRQKFLTLTPKGHELYEIVCLDVQKLQQAVVAKTNISQDQMQETINVMNQIHEILLKEAHND

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2060_STAAN (P62087)

Other databases:

- EMBL:   BA000018
- PIR:   D90024
- RefSeq:   NP_375378.1
- ProteinModelPortal:   P62087
- STRING:   P62087
- EnsemblBacteria:   EBSTAT00000000864
- GeneID:   1124983
- GenomeReviews:   BA000018_GR
- KEGG:   sau:SA2060
- eggNOG:   COG1846
- GeneTree:   EBGT00050000024739
- HOGENOM:   HBG693935
- OMA:   NITNEKE
- ProtClustDB:   CLSK885850
- BioCyc:   SAUR158879:SA2060-MONOMER
- GO:   GO:0005622
- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10
- SMART:   SM00347

Pfam domain/function: PF01047 MarR

EC number: NA

Molecular weight: Translated: 17152; Mature: 17152

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: PS01117 HTH_MARR_1; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSQEFFNSFITIYRPYLKLAEPILEKHNIYYGQWLILRDIAKHQPTTLIEISHRRAIEK
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHCC
PTARKTLKALIENDLITVENSLEDKRQKFLTLTPKGHELYEIVCLDVQKLQQAVVAKTNI
CHHHHHHHHHHHCCCEEHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCC
SQDQMQETINVMNQIHEILLKEAHND
CHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLSQEFFNSFITIYRPYLKLAEPILEKHNIYYGQWLILRDIAKHQPTTLIEISHRRAIEK
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHCC
PTARKTLKALIENDLITVENSLEDKRQKFLTLTPKGHELYEIVCLDVQKLQQAVVAKTNI
CHHHHHHHHHHHCCCEEHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCC
SQDQMQETINVMNQIHEILLKEAHND
CHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11418146