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The map label for this gene is ydiC [H]

Identifier: 57650723

GI number: 57650723

Start: 2099454

End: 2100116

Strand: Reverse

Name: ydiC [H]

Synonym: SACOL2040

Alternate gene names: 57650723

Gene position: 2100116-2099454 (Counterclockwise)

Preceding gene: 57650724

Following gene: 57650722

Centisome position: 74.75

GC content: 35.29

Gene sequence:

>663_bases
ATGAATTCGCTGCTCATTGATACATCGAATCAACCATTATCAGTAGCATTGATGCAAAACGATGAAGTTTTAGCTGAAAT
AACTACGGATTCTAAACAAAATCATTCAGTGCAATTAATGCCTGCGATTAGTCAGCTATTTGAGCAGAGCAAAATAGCTA
AACAGCAATTAGATGCGATTATTGTTGCTGAAGGTCCTGGTTCATATACTGGCTTACGTATCGGTGTTACTGTTGCTAAA
ACATTAGCGTATGCGTTAGATGTTAAATTATATGGTGTTTCATCATTAAAGGCATTGGCAGCAACAATCGATCATACTGA
TAAATTATTGGTTCCTGTGTTTGATGCAAGACGACAAGCAGTTTATACAGGCATATTCCAGTGGCAAAATGGTCAATTAG
TGACTATTTTAGAAGATCAATATATGTCGATAGAGGCATTGCGAGCTTTTTTAGAAGATTTAAACCAACCATTTATTTAT
ATTGGGAAAGATACTGTAAAATTACAAGATGAATTACAAGGTGAAGTGATTGCGCAGCTACCAAATGCATCAGTCATGTA
TCAATTGCTAGATAAACCTTCAGACGTACATACATTTACTCCTAAATACCATAAATTAGCTGAGGCGGAACGAAATTGGA
TCAACAGTCAAAAGAACAATTAA

Upstream 100 bases:

>100_bases
CATTTATCTATTAACATTTCAACAATATCTGAAAATACAAGACAAATTGAGTTGTTCGCGCAAGGAGAACATTATGAACA
AATTAAGGAGGCAATTATCC

Downstream 100 bases:

>100_bases
ACATTAGAGAGATGACTAAAGAAGATGTGCCACAAGTCTTTGATCTTGAGCGTCGGAGTTTCAATGACAGTTCTTGGACA
ATTGACGCATTTTATCATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MNSLLIDTSNQPLSVALMQNDEVLAEITTDSKQNHSVQLMPAISQLFEQSKIAKQQLDAIIVAEGPGSYTGLRIGVTVAK
TLAYALDVKLYGVSSLKALAATIDHTDKLLVPVFDARRQAVYTGIFQWQNGQLVTILEDQYMSIEALRAFLEDLNQPFIY
IGKDTVKLQDELQGEVIAQLPNASVMYQLLDKPSDVHTFTPKYHKLAEAERNWINSQKNN

Sequences:

>Translated_220_residues
MNSLLIDTSNQPLSVALMQNDEVLAEITTDSKQNHSVQLMPAISQLFEQSKIAKQQLDAIIVAEGPGSYTGLRIGVTVAK
TLAYALDVKLYGVSSLKALAATIDHTDKLLVPVFDARRQAVYTGIFQWQNGQLVTILEDQYMSIEALRAFLEDLNQPFIY
IGKDTVKLQDELQGEVIAQLPNASVMYQLLDKPSDVHTFTPKYHKLAEAERNWINSQKNN
>Mature_220_residues
MNSLLIDTSNQPLSVALMQNDEVLAEITTDSKQNHSVQLMPAISQLFEQSKIAKQQLDAIIVAEGPGSYTGLRIGVTVAK
TLAYALDVKLYGVSSLKALAATIDHTDKLLVPVFDARRQAVYTGIFQWQNGQLVTILEDQYMSIEALRAFLEDLNQPFIY
IGKDTVKLQDELQGEVIAQLPNASVMYQLLDKPSDVHTFTPKYHKLAEAERNWINSQKNN

Specific function: Unknown

COG id: COG1214

COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M22 family [H]

Homologues:

Organism=Escherichia coli, GI1788109, Length=129, Percent_Identity=30.2325581395349, Blast_Score=67, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022496
- InterPro:   IPR000905 [H]

Pfam domain/function: PF00814 Peptidase_M22 [H]

EC number: NA

Molecular weight: Translated: 24536; Mature: 24536

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSLLIDTSNQPLSVALMQNDEVLAEITTDSKQNHSVQLMPAISQLFEQSKIAKQQLDAI
CCCEEEECCCCCEEEEEEECCCEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHCCEE
IVAEGPGSYTGLRIGVTVAKTLAYALDVKLYGVSSLKALAATIDHTDKLLVPVFDARRQA
EEECCCCCCCEEEEHHHHHHHHHHHHEEEEECHHHHHHHHHHHCCCCCEEEEEHHHHHHH
VYTGIFQWQNGQLVTILEDQYMSIEALRAFLEDLNQPFIYIGKDTVKLQDELQGEVIAQL
HEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCEEEEHHHHCCHHHHHC
PNASVMYQLLDKPSDVHTFTPKYHKLAEAERNWINSQKNN
CCHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNSLLIDTSNQPLSVALMQNDEVLAEITTDSKQNHSVQLMPAISQLFEQSKIAKQQLDAI
CCCEEEECCCCCEEEEEEECCCEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHCCEE
IVAEGPGSYTGLRIGVTVAKTLAYALDVKLYGVSSLKALAATIDHTDKLLVPVFDARRQA
EEECCCCCCCEEEEHHHHHHHHHHHHEEEEECHHHHHHHHHHHCCCCCEEEEEHHHHHHH
VYTGIFQWQNGQLVTILEDQYMSIEALRAFLEDLNQPFIYIGKDTVKLQDELQGEVIAQL
HEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCEEEEHHHHCCHHHHHC
PNASVMYQLLDKPSDVHTFTPKYHKLAEAERNWINSQKNN
CCHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]