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The map label for this gene is agrA

Identifier: 57650711

GI number: 57650711

Start: 2085180

End: 2085896

Strand: Direct

Name: agrA

Synonym: SACOL2026

Alternate gene names: 57650711

Gene position: 2085180-2085896 (Clockwise)

Preceding gene: 57650710

Following gene: 57650719

Centisome position: 74.22

GC content: 31.24

Gene sequence:

>717_bases
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACCTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCTGAATTAAGAACTCGAATTATAGACTGTTTAGAAACTGCACATACACGCTTACAATTGT
TGTCTAAAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATAG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Upstream 100 bases:

>100_bases
TGATAATGCAGACAATGTCTTATTAGATACAATTATCGAAAATGGTTTCTTTATTCAAAAAGTTGAAATTATTAACAACT
AGCCATAAGGATGTGAATGT

Downstream 100 bases:

>100_bases
TAAGATAATAAAGTCAGTTAACGGCGTATTCAATTGTAAATCTTGTTGGATTTTAACAAGATAACTAGCAAATGCACTGT
ATAGCTGGCTTTTTAATTTT

Product: accessory gene regulator protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Sequences:

>Translated_238_residues
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI
>Mature_238_residues
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Specific function: Required for high-level post-exponential phase expression of a series of secreted proteins

COG id: COG3279

COG function: function code KT; Response regulator of the LytR/AlgR family

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): AGRA_STAAC (Q5HEG2)

Other databases:

- EMBL:   CP000046
- RefSeq:   YP_186845.1
- ProteinModelPortal:   Q5HEG2
- STRING:   Q5HEG2
- EnsemblBacteria:   EBSTAT00000010583
- GeneID:   3236412
- GenomeReviews:   CP000046_GR
- KEGG:   sac:SACOL2026
- TIGR:   SACOL2026
- eggNOG:   COG3279
- GeneTree:   EBGT00050000024062
- HOGENOM:   HBG694621
- OMA:   ASEIRKH
- ProtClustDB:   CLSK885733
- BioCyc:   SAUR93062:SACOL2026-MONOMER
- GO:   GO:0005737
- GO:   GO:0006350
- InterPro:   IPR011006
- InterPro:   IPR007492
- InterPro:   IPR001789
- SMART:   SM00850
- SMART:   SM00448

Pfam domain/function: PF04397 LytTR; PF00072 Response_reg; SSF52172 CheY_like

EC number: NA

Molecular weight: Translated: 27906; Mature: 27906

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: PS50930 HTH_LYTTR; PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDI
CEEEEECCCCHHHHHHHHHHHHEEEEECCCCEEEEECCCHHHHHHHHCCCCCCEEEEEEE
QLSTDINGIKLGSEIRKHDPVGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRI
EEECCCCCEEECCHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHEECCCHHHHHHHH
IDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIMFFESSTKSHRLIAHLDNRQI
HHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCEEEEECCCCCCEEEEEECCCEE
EFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI
EEEECHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHCCC
>Mature Secondary Structure
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDI
CEEEEECCCCHHHHHHHHHHHHEEEEECCCCEEEEECCCHHHHHHHHCCCCCCEEEEEEE
QLSTDINGIKLGSEIRKHDPVGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRI
EEECCCCCEEECCHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHEECCCHHHHHHHH
IDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIMFFESSTKSHRLIAHLDNRQI
HHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCEEEEECCCCCCEEEEEECCCEE
EFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI
EEEECHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA