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The map label for this gene is xtmA [H]

Identifier: 57650700

GI number: 57650700

Start: 2074523

End: 2075113

Strand: Reverse

Name: xtmA [H]

Synonym: SACOL2014

Alternate gene names: 57650700

Gene position: 2075113-2074523 (Counterclockwise)

Preceding gene: 57650701

Following gene: 57650699

Centisome position: 73.86

GC content: 34.69

Gene sequence:

>591_bases
ATGAGTGAGTTAACTGCAAAGCAAGCACGTTTTGTGAATGAGTATATTAGAACACTGAATGTAACACAAAGTGCCATAAA
AGCAGGATATAACGCAAATAGCGCACATGTGACAGCGTGTAGGTTATTGAAAAAGCCGCACATCAAGCAATATATACAAG
AACAAAAAGATAAGATTATAGATGAGAATGTATTAACCGCAAAAGAGTTATTACATGTGCTAACGAATGCGGCAGTCGGT
GATGAAACAGAAACGAAAGAAGTTGTAGTCAAGCGTGGAGAATATAAAGAAAATCCACAAAGTGGCAAAGTACAATTAGT
CTATAATGAACATGTTGAACTGATAGAGGTACCAATAAAACCTAGTGATCGTTTAAAAGCTCGTGATATGTTGGGTAAAT
ATCATAAATTATTTACAGATAAGCATGATATAAACGGTAATGTACCTATATTCATTAATATTGGTGAATGGGACGGAGGT
GATGAGGGGTTAGATAAGGCAGTGAAAGATGTATCTAACGATAATCCTAATCATACTGTGATTGTGGATGATATACCGTT
AGAAGATTATGAGTCAATTAGGTTTTTATAA

Upstream 100 bases:

>100_bases
GACTTAGTTATCAAGATATTAGTAGTGCCTTAGATTGTTCAGAACAATCTGTAATATTATGGTATGAAACCATATTAGAT
AAAATTGTGGGGGTGATAAA

Downstream 100 bases:

>100_bases
ATTGGGTATATATTTTATGGTGTTGCCAGTATTTATTGATAGTATCGGTTAAGACGATGAGAAGAATGAGTGAGATTTAA
AAGAGTTGTAAACGCAATAT

Product: phage terminase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MSELTAKQARFVNEYIRTLNVTQSAIKAGYNANSAHVTACRLLKKPHIKQYIQEQKDKIIDENVLTAKELLHVLTNAAVG
DETETKEVVVKRGEYKENPQSGKVQLVYNEHVELIEVPIKPSDRLKARDMLGKYHKLFTDKHDINGNVPIFINIGEWDGG
DEGLDKAVKDVSNDNPNHTVIVDDIPLEDYESIRFL

Sequences:

>Translated_196_residues
MSELTAKQARFVNEYIRTLNVTQSAIKAGYNANSAHVTACRLLKKPHIKQYIQEQKDKIIDENVLTAKELLHVLTNAAVG
DETETKEVVVKRGEYKENPQSGKVQLVYNEHVELIEVPIKPSDRLKARDMLGKYHKLFTDKHDINGNVPIFINIGEWDGG
DEGLDKAVKDVSNDNPNHTVIVDDIPLEDYESIRFL
>Mature_195_residues
SELTAKQARFVNEYIRTLNVTQSAIKAGYNANSAHVTACRLLKKPHIKQYIQEQKDKIIDENVLTAKELLHVLTNAAVGD
ETETKEVVVKRGEYKENPQSGKVQLVYNEHVELIEVPIKPSDRLKARDMLGKYHKLFTDKHDINGNVPIFINIGEWDGGD
EGLDKAVKDVSNDNPNHTVIVDDIPLEDYESIRFL

Specific function: Functions as a terminase [H]

COG id: COG3728

COG function: function code L; Phage terminase, small subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yqaS and B.subtilis phage SPP1 terminase small subunit [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018925
- InterPro:   IPR005335 [H]

Pfam domain/function: PF10668 Phage_terminase; PF03592 Terminase_2 [H]

EC number: NA

Molecular weight: Translated: 22221; Mature: 22090

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELTAKQARFVNEYIRTLNVTQSAIKAGYNANSAHVTACRLLKKPHIKQYIQEQKDKII
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHH
DENVLTAKELLHVLTNAAVGDETETKEVVVKRGEYKENPQSGKVQLVYNEHVELIEVPIK
CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCEEEEEECCC
PSDRLKARDMLGKYHKLFTDKHDINGNVPIFINIGEWDGGDEGLDKAVKDVSNDNPNHTV
CCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEE
IVDDIPLEDYESIRFL
EEECCCCCCHHHHCCC
>Mature Secondary Structure 
SELTAKQARFVNEYIRTLNVTQSAIKAGYNANSAHVTACRLLKKPHIKQYIQEQKDKII
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHH
DENVLTAKELLHVLTNAAVGDETETKEVVVKRGEYKENPQSGKVQLVYNEHVELIEVPIK
CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCEEEEEECCC
PSDRLKARDMLGKYHKLFTDKHDINGNVPIFINIGEWDGGDEGLDKAVKDVSNDNPNHTV
CCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEE
IVDDIPLEDYESIRFL
EEECCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8083174; 9384377 [H]