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The map label for this gene is yidD [C]

Identifier: 57650580

GI number: 57650580

Start: 1897009

End: 1897266

Strand: Direct

Name: yidD [C]

Synonym: SACOL1842

Alternate gene names: 57650580

Gene position: 1897009-1897266 (Clockwise)

Preceding gene: 57650576

Following gene: 57650584

Centisome position: 67.52

GC content: 37.98

Gene sequence:

>258_bases
ATGAAAAAGATATTCTTGGCGATGATTCATTTTTATCAACGTTTCATTTCGCCACTCACTCCACCAACTTGTCGTTTTTA
TCCAACATGTTCAGAGTACACTAGAGAAGCGATTCAATACCACGGTGCTTTCAAAGGCCTTTATTTAGGTATCCGTCGTA
TTTTAAAATGTCATCCGCTTCATAAAGGCGGCTTTGACCCTGTTCCGTTAAAAAAAGACAAGTCAGCAAGCAAGCATTCA
CATAAACATAACCATTAA

Upstream 100 bases:

>100_bases
TTAACTTGACGATTATCTTTATCCCTAAACTTCACGCGCATCACATCCCTACATTGTATGTTAATATAATAGTTAATTAC
TATCGTTGGAGGCATTAATT

Downstream 100 bases:

>100_bases
TATGGTTGTAATTGAGTTATATCCACTAAAGGGGGGCGAAATTCGAGTCGCCCCTCTTTTAATATGCCTGAATGCGCCAC
CACATCTTGTTCAAAATAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MKKIFLAMIHFYQRFISPLTPPTCRFYPTCSEYTREAIQYHGAFKGLYLGIRRILKCHPLHKGGFDPVPLKKDKSASKHS
HKHNH

Sequences:

>Translated_85_residues
MKKIFLAMIHFYQRFISPLTPPTCRFYPTCSEYTREAIQYHGAFKGLYLGIRRILKCHPLHKGGFDPVPLKKDKSASKHS
HKHNH
>Mature_85_residues
MKKIFLAMIHFYQRFISPLTPPTCRFYPTCSEYTREAIQYHGAFKGLYLGIRRILKCHPLHKGGFDPVPLKKDKSASKHS
HKHNH

Specific function: Unknown

COG id: COG0759

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0161 family

Homologues:

Organism=Escherichia coli, GI87082322, Length=68, Percent_Identity=55.8823529411765, Blast_Score=87, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1613_STAAN (P67305)

Other databases:

- EMBL:   BA000018
- PIR:   C89965
- RefSeq:   NP_374902.1
- STRING:   P67305
- EnsemblBacteria:   EBSTAT00000000035
- GeneID:   1124457
- GenomeReviews:   BA000018_GR
- KEGG:   sau:SA1613
- eggNOG:   COG0759
- GeneTree:   EBGT00050000025429
- HOGENOM:   HBG634291
- OMA:   FFSAFTP
- ProtClustDB:   CLSK2516835
- BioCyc:   SAUR158879:SA1613-MONOMER
- HAMAP:   MF_00386
- InterPro:   IPR002696
- ProDom:   PD004225
- TIGRFAMs:   TIGR00278

Pfam domain/function: PF01809 DUF37

EC number: NA

Molecular weight: Translated: 9967; Mature: 9967

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIFLAMIHFYQRFISPLTPPTCRFYPTCSEYTREAIQYHGAFKGLYLGIRRILKCHPL
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HKGGFDPVPLKKDKSASKHSHKHNH
CCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKIFLAMIHFYQRFISPLTPPTCRFYPTCSEYTREAIQYHGAFKGLYLGIRRILKCHPL
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HKGGFDPVPLKKDKSASKHSHKHNH
CCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11418146