Definition | Staphylococcus aureus subsp. aureus COL chromosome, complete genome. |
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Accession | NC_002951 |
Length | 2,809,422 |
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The map label for this gene is lysP [H]
Identifier: 57650553
GI number: 57650553
Start: 1757797
End: 1759290
Strand: Reverse
Name: lysP [H]
Synonym: SACOL1728
Alternate gene names: 57650553
Gene position: 1759290-1757797 (Counterclockwise)
Preceding gene: 57650554
Following gene: 57650552
Centisome position: 62.62
GC content: 34.81
Gene sequence:
>1494_bases ATGTCAAAAGTTCAAAATGAAAGTAACAATGTTGTCAAAAGGGGACTTAAAGATCGTCATATTTCTATGATTGCGATTGG GGGTTGTATTGGTACAGGTTTATTTGTAACTTCTGGTGGAGCAATTCATGATGCAGGTGCTTTGGGTGCATTAATAGGAT ACGCAATTATCGGAATAATGGTATTTTTCTTAATGACGTCACTTGGCGAAATGGCTACGTATTTGCCAGTATCAGGTTCA TTTAGTACATATGCTACAAGATTTGTTGATCCATCTTTAGGGTTTGCGCTTGGTTGGAACTATTGGTTTAACTGGGTAGT GACTGTAGCAGCAGATATTACGATTGCAGCACAAGTCATTCAATATTGGACACCATTGCAAGGCATACCCGCTTGGGCAT GGAGTGCGTTGTTCTTAGTTATAATTTTTAGTCTGAATTCGTTATCAGTTCGCGTCTATGGTGAAAGTGAATACTGGTTG GCATTGATAAAAGTGGTTACAGTTATTGTTTTCATTGCAATTGGTTTATTAACGATTGTCGGAATCATGGGTGGTCATGT TGTAGGATTCGAAATATTTAATAAAGGTGAAGGTCCAATTCTTGGTGGCAACTTAGGAGGAAGTTTGTTATCAATTCTAG GTGTATTCTTAATCGCTGGTTTCTCATTCCAAGGTACTGAGTTAATTGGTATTACGGCTGGTGAATCAGAAAATCCTGAA CGTGCTGTGCCGAAAGCAATTAAACAAGTATTCTGGAGAATTTTATTATTTTACATTTTAGCCATTTTTGTTATCGGTAT GTTAATTCCTTATGATAGTAGTGCATTAATGGGGGGTAGTGATAATGTAGCAACGTCTCCATTCACATTAGTGTTTAAAA ATGCTGGATTTGCGTTTGCAGCATCATTTATGAATGCAGTCATTTTAACGTCTGTGTTATCAGCAGGTAACTCAGGTATG TATGCTTCAACTCGAATGCTATATTCAATGAGTAAAGATAAATTAGCGTTTGAAGCATTTGGTAAAACAAATAAAAACGG TGTGCCATATATGTCGTTACTCGTTACAGCAATCATTGTAGTGATAATTTTCGTATTACAAAGCCTTACAAAAGGTGCAT ACGAATATATCGTTGCAGCAAGTGGTTTAACTGGTTTTATTGCTTGGGTAGGTATAGCAGTAAGTCATTATCGATTTAGA AGAGCATTTGATAAACAAAATTATGACAAATCTAAATTAAAATATACTGCTAAATTATTCCCATTCGGACCATTATTTGC TGGCTTTTTATGTATTGTAGTAATTATTGGTCAAGATGTTGACTTTATTAAAACAGGAGATTTTAATTTTAGTCGCTTCT TAATTACGTATATGGGAATTCCAGTATTTTTAGCATTCTTTATTTATCATAAGCTTCGATATAAAACGAAAAAAATTCCA TTAGAACAAGTAGATTTACGTCAAGACGTGTCAATGGATGAAATAAAAGGTTAA
Upstream 100 bases:
>100_bases CTTTTTTACTTTTAATATCACTATGTTCTGTAAAAAAGGGTATGAAAGTGAATAAAGGTTATTTATTTCTTGGCCTCTAA AACATGGAAAGGGAGCTTAT
Downstream 100 bases:
>100_bases AATAAAAATAATTACAGTTATAGTGTTGACTTAAATGTGAATTGTTGATATGATTAATAACGTTGAATACGAAACGAACC AAGTAGAAGCACCCGCTTCT
Product: amino acid permease
Products: Proton [Cytoplasm]; L-lysine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 497; Mature: 496
Protein sequence:
>497_residues MSKVQNESNNVVKRGLKDRHISMIAIGGCIGTGLFVTSGGAIHDAGALGALIGYAIIGIMVFFLMTSLGEMATYLPVSGS FSTYATRFVDPSLGFALGWNYWFNWVVTVAADITIAAQVIQYWTPLQGIPAWAWSALFLVIIFSLNSLSVRVYGESEYWL ALIKVVTVIVFIAIGLLTIVGIMGGHVVGFEIFNKGEGPILGGNLGGSLLSILGVFLIAGFSFQGTELIGITAGESENPE RAVPKAIKQVFWRILLFYILAIFVIGMLIPYDSSALMGGSDNVATSPFTLVFKNAGFAFAASFMNAVILTSVLSAGNSGM YASTRMLYSMSKDKLAFEAFGKTNKNGVPYMSLLVTAIIVVIIFVLQSLTKGAYEYIVAASGLTGFIAWVGIAVSHYRFR RAFDKQNYDKSKLKYTAKLFPFGPLFAGFLCIVVIIGQDVDFIKTGDFNFSRFLITYMGIPVFLAFFIYHKLRYKTKKIP LEQVDLRQDVSMDEIKG
Sequences:
>Translated_497_residues MSKVQNESNNVVKRGLKDRHISMIAIGGCIGTGLFVTSGGAIHDAGALGALIGYAIIGIMVFFLMTSLGEMATYLPVSGS FSTYATRFVDPSLGFALGWNYWFNWVVTVAADITIAAQVIQYWTPLQGIPAWAWSALFLVIIFSLNSLSVRVYGESEYWL ALIKVVTVIVFIAIGLLTIVGIMGGHVVGFEIFNKGEGPILGGNLGGSLLSILGVFLIAGFSFQGTELIGITAGESENPE RAVPKAIKQVFWRILLFYILAIFVIGMLIPYDSSALMGGSDNVATSPFTLVFKNAGFAFAASFMNAVILTSVLSAGNSGM YASTRMLYSMSKDKLAFEAFGKTNKNGVPYMSLLVTAIIVVIIFVLQSLTKGAYEYIVAASGLTGFIAWVGIAVSHYRFR RAFDKQNYDKSKLKYTAKLFPFGPLFAGFLCIVVIIGQDVDFIKTGDFNFSRFLITYMGIPVFLAFFIYHKLRYKTKKIP LEQVDLRQDVSMDEIKG >Mature_496_residues SKVQNESNNVVKRGLKDRHISMIAIGGCIGTGLFVTSGGAIHDAGALGALIGYAIIGIMVFFLMTSLGEMATYLPVSGSF STYATRFVDPSLGFALGWNYWFNWVVTVAADITIAAQVIQYWTPLQGIPAWAWSALFLVIIFSLNSLSVRVYGESEYWLA LIKVVTVIVFIAIGLLTIVGIMGGHVVGFEIFNKGEGPILGGNLGGSLLSILGVFLIAGFSFQGTELIGITAGESENPER AVPKAIKQVFWRILLFYILAIFVIGMLIPYDSSALMGGSDNVATSPFTLVFKNAGFAFAASFMNAVILTSVLSAGNSGMY ASTRMLYSMSKDKLAFEAFGKTNKNGVPYMSLLVTAIIVVIIFVLQSLTKGAYEYIVAASGLTGFIAWVGIAVSHYRFRR AFDKQNYDKSKLKYTAKLFPFGPLFAGFLCIVVIIGQDVDFIKTGDFNFSRFLITYMGIPVFLAFFIYHKLRYKTKKIPL EQVDLRQDVSMDEIKG
Specific function: Permease that is involved in the transport across the cytoplasmic membrane of lysine [H]
COG id: COG0833
COG function: function code E; Amino acid transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Amino acid transporter (AAT) (TC 2.A.3.1) family [H]
Homologues:
Organism=Escherichia coli, GI1788480, Length=490, Percent_Identity=50.2040816326531, Blast_Score=475, Evalue=1e-135, Organism=Escherichia coli, GI87081708, Length=446, Percent_Identity=38.1165919282511, Blast_Score=298, Evalue=4e-82, Organism=Escherichia coli, GI1786789, Length=472, Percent_Identity=36.6525423728814, Blast_Score=272, Evalue=3e-74, Organism=Escherichia coli, GI1786302, Length=483, Percent_Identity=35.6107660455487, Blast_Score=272, Evalue=4e-74, Organism=Escherichia coli, GI48994972, Length=442, Percent_Identity=37.3303167420815, Blast_Score=253, Evalue=2e-68, Organism=Escherichia coli, GI1789017, Length=450, Percent_Identity=33.7777777777778, Blast_Score=234, Evalue=7e-63, Organism=Escherichia coli, GI1790653, Length=451, Percent_Identity=34.1463414634146, Blast_Score=228, Evalue=1e-60, Organism=Escherichia coli, GI87081915, Length=403, Percent_Identity=34.4913151364764, Blast_Score=226, Evalue=2e-60, Organism=Escherichia coli, GI1786602, Length=409, Percent_Identity=34.9633251833741, Blast_Score=217, Evalue=1e-57, Organism=Escherichia coli, GI87081869, Length=406, Percent_Identity=23.6453201970443, Blast_Score=69, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17532491, Length=446, Percent_Identity=23.542600896861, Blast_Score=69, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6324061, Length=484, Percent_Identity=38.8429752066116, Blast_Score=344, Evalue=2e-95, Organism=Saccharomyces cerevisiae, GI6320772, Length=495, Percent_Identity=39.1919191919192, Blast_Score=335, Evalue=9e-93, Organism=Saccharomyces cerevisiae, GI6324990, Length=492, Percent_Identity=36.1788617886179, Blast_Score=313, Evalue=4e-86, Organism=Saccharomyces cerevisiae, GI6324059, Length=496, Percent_Identity=37.7016129032258, Blast_Score=310, Evalue=4e-85, Organism=Saccharomyces cerevisiae, GI6322892, Length=496, Percent_Identity=36.2903225806452, Blast_Score=295, Evalue=1e-80, Organism=Saccharomyces cerevisiae, GI6324553, Length=501, Percent_Identity=34.3313373253493, Blast_Score=270, Evalue=5e-73, Organism=Saccharomyces cerevisiae, GI6324924, Length=500, Percent_Identity=32.6, Blast_Score=268, Evalue=1e-72, Organism=Saccharomyces cerevisiae, GI6321629, Length=500, Percent_Identity=30.6, Blast_Score=248, Evalue=1e-66, Organism=Saccharomyces cerevisiae, GI6320717, Length=493, Percent_Identity=29.2089249492901, Blast_Score=244, Evalue=3e-65, Organism=Saccharomyces cerevisiae, GI6319824, Length=502, Percent_Identity=30.0796812749004, Blast_Score=243, Evalue=4e-65, Organism=Saccharomyces cerevisiae, GI6319543, Length=496, Percent_Identity=30.4435483870968, Blast_Score=232, Evalue=1e-61, Organism=Saccharomyces cerevisiae, GI6321053, Length=490, Percent_Identity=31.8367346938775, Blast_Score=227, Evalue=4e-60, Organism=Saccharomyces cerevisiae, GI6322967, Length=507, Percent_Identity=29.7830374753452, Blast_Score=223, Evalue=7e-59, Organism=Saccharomyces cerevisiae, GI6319542, Length=488, Percent_Identity=28.8934426229508, Blast_Score=218, Evalue=1e-57, Organism=Saccharomyces cerevisiae, GI6320251, Length=491, Percent_Identity=28.3095723014257, Blast_Score=207, Evalue=2e-54, Organism=Saccharomyces cerevisiae, GI6324981, Length=494, Percent_Identity=30.3643724696356, Blast_Score=200, Evalue=4e-52, Organism=Saccharomyces cerevisiae, GI6319608, Length=504, Percent_Identity=28.3730158730159, Blast_Score=197, Evalue=4e-51, Organism=Saccharomyces cerevisiae, GI6320364, Length=550, Percent_Identity=27.2727272727273, Blast_Score=185, Evalue=1e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004841 - InterPro: IPR002293 - InterPro: IPR004840 [H]
Pfam domain/function: PF00324 AA_permease [H]
EC number: NA
Molecular weight: Translated: 54220; Mature: 54088
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: PS00218 AMINO_ACID_PERMEASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKVQNESNNVVKRGLKDRHISMIAIGGCIGTGLFVTSGGAIHDAGALGALIGYAIIGIM CCCCCCCCHHHHHCCCCCCCEEEEEECCHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHH VFFLMTSLGEMATYLPVSGSFSTYATRFVDPSLGFALGWNYWFNWVVTVAADITIAAQVI HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QYWTPLQGIPAWAWSALFLVIIFSLNSLSVRVYGESEYWLALIKVVTVIVFIAIGLLTIV HHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH GIMGGHVVGFEIFNKGEGPILGGNLGGSLLSILGVFLIAGFSFQGTELIGITAGESENPE HHHCCCEEEEEEEECCCCCEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCH RAVPKAIKQVFWRILLFYILAIFVIGMLIPYDSSALMGGSDNVATSPFTLVFKNAGFAFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHH ASFMNAVILTSVLSAGNSGMYASTRMLYSMSKDKLAFEAFGKTNKNGVPYMSLLVTAIIV HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHH VIIFVLQSLTKGAYEYIVAASGLTGFIAWVGIAVSHYRFRRAFDKQNYDKSKLKYTAKLF HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC PFGPLFAGFLCIVVIIGQDVDFIKTGDFNFSRFLITYMGIPVFLAFFIYHKLRYKTKKIP CCHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LEQVDLRQDVSMDEIKG HHHHHHHHCCCHHHCCC >Mature Secondary Structure SKVQNESNNVVKRGLKDRHISMIAIGGCIGTGLFVTSGGAIHDAGALGALIGYAIIGIM CCCCCCCHHHHHCCCCCCCEEEEEECCHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHH VFFLMTSLGEMATYLPVSGSFSTYATRFVDPSLGFALGWNYWFNWVVTVAADITIAAQVI HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QYWTPLQGIPAWAWSALFLVIIFSLNSLSVRVYGESEYWLALIKVVTVIVFIAIGLLTIV HHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH GIMGGHVVGFEIFNKGEGPILGGNLGGSLLSILGVFLIAGFSFQGTELIGITAGESENPE HHHCCCEEEEEEEECCCCCEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCH RAVPKAIKQVFWRILLFYILAIFVIGMLIPYDSSALMGGSDNVATSPFTLVFKNAGFAFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHH ASFMNAVILTSVLSAGNSGMYASTRMLYSMSKDKLAFEAFGKTNKNGVPYMSLLVTAIIV HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHH VIIFVLQSLTKGAYEYIVAASGLTGFIAWVGIAVSHYRFRRAFDKQNYDKSKLKYTAKLF HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC PFGPLFAGFLCIVVIIGQDVDFIKTGDFNFSRFLITYMGIPVFLAFFIYHKLRYKTKKIP CCHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LEQVDLRQDVSMDEIKG HHHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; L-lysine [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-lysine [Periplasm] = Proton [Cytoplasm] + L-lysine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1315732; 9278503; 7551055 [H]