Definition | Staphylococcus aureus subsp. aureus COL chromosome, complete genome. |
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Accession | NC_002951 |
Length | 2,809,422 |
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The map label for this gene is ruvA [H]
Identifier: 57650523
GI number: 57650523
Start: 1729800
End: 1730402
Strand: Reverse
Name: ruvA [H]
Synonym: SACOL1697
Alternate gene names: 57650523
Gene position: 1730402-1729800 (Counterclockwise)
Preceding gene: 57650524
Following gene: 57650522
Centisome position: 61.59
GC content: 33.17
Gene sequence:
>603_bases ATGTACGCGTATGTCAAAGGTAAGTTAACACATTTATATCCTACACACGTAGTTGTTGAAACTGCTGGTGTTGGTTATGA AATTCAAACACCAAATTCTTATCGTTTTCAAAAGCATCTAGATCATGAAGTTTTAATTCATACATCTTTAATTGTTCGTG AAGATGCACAATTATTGTATGGATTTAGTAGTGAAGAAGAGAAAGATATGTTCTTGAGTTTAATTAAAGTTACTGGTATT GGTCCGAAATCAGCTTTAGCTATTTTAGCGACAAGTACGCCTAATGAAGTAAAACGTGCCATTGAAAATGAAAATGATAC GTATTTAACTAAATTCCCAGGAATTGGTAAGAAAACGGCAAGACAGATTGTCTTAGATTTAAAAGGTAAAGTGAAAATTA CTGAAGAAGATAGCGATTCATTATTACAAGTAGACGCTACTTCGACGGTGCAAGATCAATTCGTGCAAGAAGCAATGTTA GCGTTAGAAGCATTAGGTTATTCTAAACGAGAGCTTGCAAAAGTTGAGAAAACGTTAAATAAAAATAAATATGACTCAGT TGATGAAGCTGTTAAGGCAGGTCTTCAATTAGTTGTATCTTAA
Upstream 100 bases:
>100_bases AAAGAAACTTCAGTAGAAGATGTTATTGGCGCTTTGAGAAATTTAGATTATGTATCAAAAGTAGAATTAATTAGTATGAG TATGTAAGGATGTGCCTATA
Downstream 100 bases:
>100_bases TTTTAAATAGATTAATAGGGGAAGTGTTGTCATGAATGAGCGTATGGTTGATCAATCAATGCATAGTGAAGAAACTGATT TCGAATTGTCGCTTAGACCT
Product: Holliday junction DNA helicase RuvA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MYAYVKGKLTHLYPTHVVVETAGVGYEIQTPNSYRFQKHLDHEVLIHTSLIVREDAQLLYGFSSEEEKDMFLSLIKVTGI GPKSALAILATSTPNEVKRAIENENDTYLTKFPGIGKKTARQIVLDLKGKVKITEEDSDSLLQVDATSTVQDQFVQEAML ALEALGYSKRELAKVEKTLNKNKYDSVDEAVKAGLQLVVS
Sequences:
>Translated_200_residues MYAYVKGKLTHLYPTHVVVETAGVGYEIQTPNSYRFQKHLDHEVLIHTSLIVREDAQLLYGFSSEEEKDMFLSLIKVTGI GPKSALAILATSTPNEVKRAIENENDTYLTKFPGIGKKTARQIVLDLKGKVKITEEDSDSLLQVDATSTVQDQFVQEAML ALEALGYSKRELAKVEKTLNKNKYDSVDEAVKAGLQLVVS >Mature_200_residues MYAYVKGKLTHLYPTHVVVETAGVGYEIQTPNSYRFQKHLDHEVLIHTSLIVREDAQLLYGFSSEEEKDMFLSLIKVTGI GPKSALAILATSTPNEVKRAIENENDTYLTKFPGIGKKTARQIVLDLKGKVKITEEDSDSLLQVDATSTVQDQFVQEAML ALEALGYSKRELAKVEKTLNKNKYDSVDEAVKAGLQLVVS
Specific function: The ruvA-ruvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is an helicase that mediates the Holliday
COG id: COG0632
COG function: function code L; Holliday junction resolvasome, DNA-binding subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ruvA family [H]
Homologues:
Organism=Escherichia coli, GI1788168, Length=203, Percent_Identity=35.4679802955665, Blast_Score=126, Evalue=8e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011114 - InterPro: IPR013849 - InterPro: IPR003583 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR000085 - InterPro: IPR010994 [H]
Pfam domain/function: PF07499 RuvA_C; PF01330 RuvA_N [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 22263; Mature: 22263
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYAYVKGKLTHLYPTHVVVETAGVGYEIQTPNSYRFQKHLDHEVLIHTSLIVREDAQLLY CEEEEECCEEEECCCEEEEEECCCCEEEECCCCCHHHHHCCCEEEEEHHHEEECCCCEEE GFSSEEEKDMFLSLIKVTGIGPKSALAILATSTPNEVKRAIENENDTYLTKFPGIGKKTA CCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHCCCCCEEEEECCCCCHHHH RQIVLDLKGKVKITEEDSDSLLQVDATSTVQDQFVQEAMLALEALGYSKRELAKVEKTLN HHHHEECCCCEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC KNKYDSVDEAVKAGLQLVVS CCCCCCHHHHHHHHHHEECC >Mature Secondary Structure MYAYVKGKLTHLYPTHVVVETAGVGYEIQTPNSYRFQKHLDHEVLIHTSLIVREDAQLLY CEEEEECCEEEECCCEEEEEECCCCEEEECCCCCHHHHHCCCEEEEEHHHEEECCCCEEE GFSSEEEKDMFLSLIKVTGIGPKSALAILATSTPNEVKRAIENENDTYLTKFPGIGKKTA CCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHCCCCCEEEEECCCCCHHHH RQIVLDLKGKVKITEEDSDSLLQVDATSTVQDQFVQEAMLALEALGYSKRELAKVEKTLN HHHHEECCCCEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC KNKYDSVDEAVKAGLQLVVS CCCCCCHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA