Definition | Staphylococcus aureus subsp. aureus COL chromosome, complete genome. |
---|---|
Accession | NC_002951 |
Length | 2,809,422 |
Click here to switch to the map view.
The map label for this gene is cymR [H]
Identifier: 57650508
GI number: 57650508
Start: 1710092
End: 1710514
Strand: Reverse
Name: cymR [H]
Synonym: SACOL1681
Alternate gene names: 57650508
Gene position: 1710514-1710092 (Counterclockwise)
Preceding gene: 57650510
Following gene: 57650507
Centisome position: 60.88
GC content: 34.75
Gene sequence:
>423_bases ATGAAAATTTCTACTAAAGGGAGATATGGACTTACATTGATGATTTCTCTTGCTAAAAAAGAGGGGCAAGGATGTATATC ATTAAAGTCAATTGCTGAAGAAAATAATTTGAGTGATTTATATTTAGAACAGCTTGTAGGTCCTTTAAGAAATGCGGGGT TAATTCGAAGTGTACGCGGTGCTAAAGGTGGATACCAATTAAGAGTGCCAGCGGAAGAAATCTCAGCAGGGGATATTATA AGACTGTTAGAAGGTCCAATTACATTTGTTGAAAGTATTGAATCAGAACCACCTGCGCAAAAACAACTATGGATTCGCAT GAGAGATGCAGTGAGAGATGTTTTAGATAATACAACATTGAAATATTTAGCGGAATATGTAGATACAAGTGAAGATTTAG ACGGATACATGTTTTATATTTAA
Upstream 100 bases:
>100_bases ATGGTTCTGTACTCACATTTGTCACACCTTTCTTATACTATCTTAACTCAAAAAATGCTAAAATGGGAATATCAATATTC GAATTAAGTGAGGTTATACA
Downstream 100 bases:
>100_bases TCGTATAAATACTATACTATAACATAAAAACTTCATATTATAATGTTTAGCGAACCTCCTTAGTGGTATATAAATATATA CATCCAAGGAGGTTTCACTA
Product: Rrf2 family protein
Products: NA
Alternate protein names: Cysteine metabolism repressor [H]
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MKISTKGRYGLTLMISLAKKEGQGCISLKSIAEENNLSDLYLEQLVGPLRNAGLIRSVRGAKGGYQLRVPAEEISAGDII RLLEGPITFVESIESEPPAQKQLWIRMRDAVRDVLDNTTLKYLAEYVDTSEDLDGYMFYI
Sequences:
>Translated_140_residues MKISTKGRYGLTLMISLAKKEGQGCISLKSIAEENNLSDLYLEQLVGPLRNAGLIRSVRGAKGGYQLRVPAEEISAGDII RLLEGPITFVESIESEPPAQKQLWIRMRDAVRDVLDNTTLKYLAEYVDTSEDLDGYMFYI >Mature_140_residues MKISTKGRYGLTLMISLAKKEGQGCISLKSIAEENNLSDLYLEQLVGPLRNAGLIRSVRGAKGGYQLRVPAEEISAGDII RLLEGPITFVESIESEPPAQKQLWIRMRDAVRDVLDNTTLKYLAEYVDTSEDLDGYMFYI
Specific function: Master repressor of cysteine metabolism in B.subtilis. Controls the expression of genes involved either in cysteine synthesis from sulfide (cysK), sulfonates (ssu), or methionine (mccAB) or in cystine uptake (tcyP). Activity of CymR is positively regulate
COG id: COG1959
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1788880, Length=140, Percent_Identity=32.8571428571429, Blast_Score=69, Evalue=1e-13,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000944 [H]
Pfam domain/function: PF02082 Rrf2 [H]
EC number: NA
Molecular weight: Translated: 15643; Mature: 15643
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS01332 UPF0074
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKISTKGRYGLTLMISLAKKEGQGCISLKSIAEENNLSDLYLEQLVGPLRNAGLIRSVRG CCCCCCCCCCEEEEEEEHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHCC AKGGYQLRVPAEEISAGDIIRLLEGPITFVESIESEPPAQKQLWIRMRDAVRDVLDNTTL CCCCEEEECCHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHH KYLAEYVDTSEDLDGYMFYI HHHHHHHCCCCCCCCEEEEC >Mature Secondary Structure MKISTKGRYGLTLMISLAKKEGQGCISLKSIAEENNLSDLYLEQLVGPLRNAGLIRSVRG CCCCCCCCCCEEEEEEEHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHCC AKGGYQLRVPAEEISAGDIIRLLEGPITFVESIESEPPAQKQLWIRMRDAVRDVLDNTTL CCCCEEEECCHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHH KYLAEYVDTSEDLDGYMFYI HHHHHHHCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]