Definition | Staphylococcus aureus subsp. aureus COL chromosome, complete genome. |
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Accession | NC_002951 |
Length | 2,809,422 |
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The map label for this gene is iscS1 [H]
Identifier: 57650504
GI number: 57650504
Start: 1706920
End: 1708062
Strand: Reverse
Name: iscS1 [H]
Synonym: SACOL1677
Alternate gene names: 57650504
Gene position: 1708062-1706920 (Counterclockwise)
Preceding gene: 57650506
Following gene: 57650503
Centisome position: 60.8
GC content: 34.73
Gene sequence:
>1143_bases ATGGAAATTTATGCAGATTATGCTGCGACCACACCAGTAAAACCTGAAGTAGTAGATGCGATGATGACGATTTACAATTC GCATTATGGTAATCCATCATCAATACATGCTAAGGGAAGAGATGCGCGTAAATATTTAGATGAGTCAAGACGTCAAATTG CACAATTACTTGGTGCAGATACACATGAAATTATATTTACGAGTGGCGCAACAGAATCGAATAATACGGCAATTAAAGGC ATAGTAAAAGCAAATGAACAATTGGGTAATCACATTATCACATCGAAGATTGAACATCATTCTGTGTTACATGTTTTTGA ACAATTAGAGCGAGAAGGTTTTGATGTAACATATCTAGATGTTGATGATACAGGTGCTATTGATTTAGATCAACTTGAAG AAACAATTACAGATAAGACGATTTTAGTATCTATTATGTTTGTAAATAATGAAGTTGGCACAGTGCAACAAATTTATGAT ATTCAAGATATTATTGCTGAGACAAATGCATATTTCCATGTTGATGCGGTTCAAGCAATTGGACATCTTGATGTTAAGTT TGACGAATTTGAGATCGACGCAATGAGTATTACTGCTCATAAGTTTGGCGGACCAAAAGGTGTCGGTGCATTACTAGTTA AAGACCATGTTACACTAGATTATCCTCAACTTGGCGGTGAACAAGAATTGAAACGCCGTGCAGGCACTGAAAATCTTGCG CAAATTGTTGGGATGGCTAAAGCATTACAATTAGCAGAAAAGAATCGAGACGATAACAATATTCATTTAATGAATTTAAA AGAACAATTTTTAGTTAAATTACAAGAAAGAGCGATTCCATTTGAATTAAATGGTTCAATGACGGATGCTACAGGCCATA TTGTAAATCTATATTTTCCGTTTGTTGAAGTTGAAACGATGTTAACATTGTTGGATATGGCACAAATCTATGTGTCGTCT GGATCTGCATGTACAGCAGGCTCTACACAACCGTCGCATGTTTTAGATGCAATGTTCGAAGATGAGGAGCGATCAAATCA TTCGATTCGATTTAGTTTTAACGAATTGACTACTGAAAATGAAATTAATGCAATTGTAGCTGAAATTCATAAAATATATT TTAAATTTAAGGAGGAGTCATAA
Upstream 100 bases:
>100_bases AATTAAAAACATTATAAATAAAGTTAAACAGAAAAGTAGAAAAATAGTATGTAAGGTGCTATTATTGGAACATTGATAAA ATTGTGAGGAGTGTCCAAAC
Downstream 100 bases:
>100_bases TTGTCAAATAAAGATATACGTGTTGTCGTTGGTATGTCAGGCGGTGTAGATAGTTCTGTAACAGCCCACGTCTTAAAAGA ACAAGGTTATGATGTCATTG
Product: aminotransferase, class V
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MEIYADYAATTPVKPEVVDAMMTIYNSHYGNPSSIHAKGRDARKYLDESRRQIAQLLGADTHEIIFTSGATESNNTAIKG IVKANEQLGNHIITSKIEHHSVLHVFEQLEREGFDVTYLDVDDTGAIDLDQLEETITDKTILVSIMFVNNEVGTVQQIYD IQDIIAETNAYFHVDAVQAIGHLDVKFDEFEIDAMSITAHKFGGPKGVGALLVKDHVTLDYPQLGGEQELKRRAGTENLA QIVGMAKALQLAEKNRDDNNIHLMNLKEQFLVKLQERAIPFELNGSMTDATGHIVNLYFPFVEVETMLTLLDMAQIYVSS GSACTAGSTQPSHVLDAMFEDEERSNHSIRFSFNELTTENEINAIVAEIHKIYFKFKEES
Sequences:
>Translated_380_residues MEIYADYAATTPVKPEVVDAMMTIYNSHYGNPSSIHAKGRDARKYLDESRRQIAQLLGADTHEIIFTSGATESNNTAIKG IVKANEQLGNHIITSKIEHHSVLHVFEQLEREGFDVTYLDVDDTGAIDLDQLEETITDKTILVSIMFVNNEVGTVQQIYD IQDIIAETNAYFHVDAVQAIGHLDVKFDEFEIDAMSITAHKFGGPKGVGALLVKDHVTLDYPQLGGEQELKRRAGTENLA QIVGMAKALQLAEKNRDDNNIHLMNLKEQFLVKLQERAIPFELNGSMTDATGHIVNLYFPFVEVETMLTLLDMAQIYVSS GSACTAGSTQPSHVLDAMFEDEERSNHSIRFSFNELTTENEINAIVAEIHKIYFKFKEES >Mature_380_residues MEIYADYAATTPVKPEVVDAMMTIYNSHYGNPSSIHAKGRDARKYLDESRRQIAQLLGADTHEIIFTSGATESNNTAIKG IVKANEQLGNHIITSKIEHHSVLHVFEQLEREGFDVTYLDVDDTGAIDLDQLEETITDKTILVSIMFVNNEVGTVQQIYD IQDIIAETNAYFHVDAVQAIGHLDVKFDEFEIDAMSITAHKFGGPKGVGALLVKDHVTLDYPQLGGEQELKRRAGTENLA QIVGMAKALQLAEKNRDDNNIHLMNLKEQFLVKLQERAIPFELNGSMTDATGHIVNLYFPFVEVETMLTLLDMAQIYVSS GSACTAGSTQPSHVLDAMFEDEERSNHSIRFSFNELTTENEINAIVAEIHKIYFKFKEES
Specific function: Catalyzes the removal of elemental sulfur from cysteine to produce alanine [H]
COG id: COG1104
COG function: function code E; Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily [H]
Homologues:
Organism=Homo sapiens, GI32307132, Length=381, Percent_Identity=40.1574803149606, Blast_Score=286, Evalue=3e-77, Organism=Homo sapiens, GI156713448, Length=416, Percent_Identity=30.0480769230769, Blast_Score=178, Evalue=6e-45, Organism=Escherichia coli, GI48994898, Length=386, Percent_Identity=42.7461139896373, Blast_Score=285, Evalue=3e-78, Organism=Escherichia coli, GI1789175, Length=392, Percent_Identity=26.2755102040816, Blast_Score=99, Evalue=5e-22, Organism=Escherichia coli, GI1787970, Length=267, Percent_Identity=25.8426966292135, Blast_Score=94, Evalue=1e-20, Organism=Caenorhabditis elegans, GI25143064, Length=365, Percent_Identity=42.7397260273973, Blast_Score=285, Evalue=2e-77, Organism=Caenorhabditis elegans, GI17533177, Length=335, Percent_Identity=30.7462686567164, Blast_Score=133, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6319831, Length=370, Percent_Identity=41.0810810810811, Blast_Score=278, Evalue=1e-75, Organism=Drosophila melanogaster, GI20129463, Length=382, Percent_Identity=41.6230366492147, Blast_Score=276, Evalue=2e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000192 - InterPro: IPR020578 - InterPro: IPR016454 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00266 Aminotran_5 [H]
EC number: =2.8.1.7 [H]
Molecular weight: Translated: 42485; Mature: 42485
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: PS00595 AA_TRANSFER_CLASS_5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIYADYAATTPVKPEVVDAMMTIYNSHYGNPSSIHAKGRDARKYLDESRRQIAQLLGAD CEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCC THEIIFTSGATESNNTAIKGIVKANEQLGNHIITSKIEHHSVLHVFEQLEREGFDVTYLD CCEEEEECCCCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE VDDTGAIDLDQLEETITDKTILVSIMFVNNEVGTVQQIYDIQDIIAETNAYFHVDAVQAI CCCCCCCCHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHH GHLDVKFDEFEIDAMSITAHKFGGPKGVGALLVKDHVTLDYPQLGGEQELKRRAGTENLA CCCCEEECCEEEEEEEEEEECCCCCCCCCEEEEECCEEECCCCCCCHHHHHHHCCHHHHH QIVGMAKALQLAEKNRDDNNIHLMNLKEQFLVKLQERAIPFELNGSMTDATGHIVNLYFP HHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEEH FVEVETMLTLLDMAQIYVSSGSACTAGSTQPSHVLDAMFEDEERSNHSIRFSFNELTTEN HHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHCCCCCCCCEEEEEEHHHCCCH EINAIVAEIHKIYFKFKEES HHHHHHHHHHHHHHEEECCC >Mature Secondary Structure MEIYADYAATTPVKPEVVDAMMTIYNSHYGNPSSIHAKGRDARKYLDESRRQIAQLLGAD CEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCC THEIIFTSGATESNNTAIKGIVKANEQLGNHIITSKIEHHSVLHVFEQLEREGFDVTYLD CCEEEEECCCCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE VDDTGAIDLDQLEETITDKTILVSIMFVNNEVGTVQQIYDIQDIIAETNAYFHVDAVQAI CCCCCCCCHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHH GHLDVKFDEFEIDAMSITAHKFGGPKGVGALLVKDHVTLDYPQLGGEQELKRRAGTENLA CCCCEEECCEEEEEEEEEEECCCCCCCCCEEEEECCEEECCCCCCCHHHHHHHCCHHHHH QIVGMAKALQLAEKNRDDNNIHLMNLKEQFLVKLQERAIPFELNGSMTDATGHIVNLYFP HHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEEH FVEVETMLTLLDMAQIYVSSGSACTAGSTQPSHVLDAMFEDEERSNHSIRFSFNELTTEN HHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHCCCCCCCCEEEEEEHHHCCCH EINAIVAEIHKIYFKFKEES HHHHHHHHHHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]