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The map label for this gene is ypbB [H]

Identifier: 57650438

GI number: 57650438

Start: 1563335

End: 1564288

Strand: Reverse

Name: ypbB [H]

Synonym: SACOL1524

Alternate gene names: 57650438

Gene position: 1564288-1563335 (Counterclockwise)

Preceding gene: 57650440

Following gene: 57650437

Centisome position: 55.68

GC content: 28.2

Gene sequence:

>954_bases
TTGCAACACATTATAAAAACAGCATTACAACAAACATTTAACTATAAAACAAATAAAAGTATTTACAATATCTTAGTTGG
TAAGAAATCTCACCAAACCTTTTTTGACGCTTGTAGTCAACAACAGTTGTCATTATATCACAGTTTACCACTATTAAAAT
ATCCGTCTTTTGAGCTATTTTTAGAAAAAATCAATGAATTTAATGCTGAAATGGAAATCATGTTGCATCCTAGATATACA
TTTGAAAGCATGGGGCAAACATTTCAAGCAATTCAACTATTAGTGCAAACCATGTCTAATACCAAACAACATGTTTTTCA
TTTTGTACCAATCTCTCAAAATAATAAGATACAAGAAACTGTAAAGATTGTCTATAACTACATTAAAGAAAACCAATTAC
AAATTGATTTTGAAAATGAACTACATAACTTGTTTAAAGCAATAACTTTAAAAGGGCCATGTTACTTACATTATTATTTG
CAAGGCTATGATGAACCAATGTATACGAGACAGCAAGTTAGTTTAATAGAAAAGCTATCTCAACAGCAATTGTTTGAATA
CGAAATGAATAATTTAGTGACAATGATGTTTGAATTAGAAAGTGGAGAATATACTATTTTATCAAAAATAATAATGAAAC
CTACATTATTAAATCAAACTTATATTACTTATACAAAATTGCTTGAACAATTCACGATGGAAGATATAGCGGCTCAACAA
CAAGTTAAAATCAATACTATCGAAGATCATGTACTTGAAATCTTAATCAAAGGTTACATGTCTAATTACGATGATTATGT
TGAACTAGAAGATCAACTCCAGTTTTTGAATTTTTATCAACAGCATCGTGGCGAACGATTAAAATTTTACAAAGAACAAT
TTGACACGTTATCATATTTTCAATTAAAAGTATTAATCGTTGGATTTGAAAGAGGTGATCTGAATGTTGCATGA

Upstream 100 bases:

>100_bases
GCCTCCTTTGATAAAAATGCTAAAATAGTAATGTGACTAAAATTTTAGACAGCATCATTTTTATTTTCAAATTATCCGTT
TTACAGAGTGAGGGTTAAAT

Downstream 100 bases:

>100_bases
TATTTTACGAAACAAATTTGGATTCGAGAGTTTTAAACCGGGACAACAGGAAATTATAGAAAGTATAATGTCTCAACAAC
ACACTCTAGGTATACTTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MQHIIKTALQQTFNYKTNKSIYNILVGKKSHQTFFDACSQQQLSLYHSLPLLKYPSFELFLEKINEFNAEMEIMLHPRYT
FESMGQTFQAIQLLVQTMSNTKQHVFHFVPISQNNKIQETVKIVYNYIKENQLQIDFENELHNLFKAITLKGPCYLHYYL
QGYDEPMYTRQQVSLIEKLSQQQLFEYEMNNLVTMMFELESGEYTILSKIIMKPTLLNQTYITYTKLLEQFTMEDIAAQQ
QVKINTIEDHVLEILIKGYMSNYDDYVELEDQLQFLNFYQQHRGERLKFYKEQFDTLSYFQLKVLIVGFERGDLNVA

Sequences:

>Translated_317_residues
MQHIIKTALQQTFNYKTNKSIYNILVGKKSHQTFFDACSQQQLSLYHSLPLLKYPSFELFLEKINEFNAEMEIMLHPRYT
FESMGQTFQAIQLLVQTMSNTKQHVFHFVPISQNNKIQETVKIVYNYIKENQLQIDFENELHNLFKAITLKGPCYLHYYL
QGYDEPMYTRQQVSLIEKLSQQQLFEYEMNNLVTMMFELESGEYTILSKIIMKPTLLNQTYITYTKLLEQFTMEDIAAQQ
QVKINTIEDHVLEILIKGYMSNYDDYVELEDQLQFLNFYQQHRGERLKFYKEQFDTLSYFQLKVLIVGFERGDLNVA
>Mature_317_residues
MQHIIKTALQQTFNYKTNKSIYNILVGKKSHQTFFDACSQQQLSLYHSLPLLKYPSFELFLEKINEFNAEMEIMLHPRYT
FESMGQTFQAIQLLVQTMSNTKQHVFHFVPISQNNKIQETVKIVYNYIKENQLQIDFENELHNLFKAITLKGPCYLHYYL
QGYDEPMYTRQQVSLIEKLSQQQLFEYEMNNLVTMMFELESGEYTILSKIIMKPTLLNQTYITYTKLLEQFTMEDIAAQQ
QVKINTIEDHVLEILIKGYMSNYDDYVELEDQLQFLNFYQQHRGERLKFYKEQFDTLSYFQLKVLIVGFERGDLNVA

Specific function: Unknown

COG id: COG4955

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008308 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37850; Mature: 37850

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHIIKTALQQTFNYKTNKSIYNILVGKKSHQTFFDACSQQQLSLYHSLPLLKYPSFELF
CHHHHHHHHHHHHCCCCCCHHHHHEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
LEKINEFNAEMEIMLHPRYTFESMGQTFQAIQLLVQTMSNTKQHVFHFVPISQNNKIQET
HHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCHHHHH
VKIVYNYIKENQLQIDFENELHNLFKAITLKGPCYLHYYLQGYDEPMYTRQQVSLIEKLS
HHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHH
QQQLFEYEMNNLVTMMFELESGEYTILSKIIMKPTLLNQTYITYTKLLEQFTMEDIAAQQ
HHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHH
QVKINTIEDHVLEILIKGYMSNYDDYVELEDQLQFLNFYQQHRGERLKFYKEQFDTLSYF
HEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
QLKVLIVGFERGDLNVA
EEEEEEEEEECCCCCCC
>Mature Secondary Structure
MQHIIKTALQQTFNYKTNKSIYNILVGKKSHQTFFDACSQQQLSLYHSLPLLKYPSFELF
CHHHHHHHHHHHHCCCCCCHHHHHEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
LEKINEFNAEMEIMLHPRYTFESMGQTFQAIQLLVQTMSNTKQHVFHFVPISQNNKIQET
HHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCHHHHH
VKIVYNYIKENQLQIDFENELHNLFKAITLKGPCYLHYYLQGYDEPMYTRQQVSLIEKLS
HHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHH
QQQLFEYEMNNLVTMMFELESGEYTILSKIIMKPTLLNQTYITYTKLLEQFTMEDIAAQQ
HHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHH
QVKINTIEDHVLEILIKGYMSNYDDYVELEDQLQFLNFYQQHRGERLKFYKEQFDTLSYF
HEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
QLKVLIVGFERGDLNVA
EEEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]