Click here to switch to the map view.

The map label for this gene is 57650401

Identifier: 57650401

GI number: 57650401

Start: 1526148

End: 1526711

Strand: Reverse

Name: 57650401

Synonym: SACOL1485

Alternate gene names: NA

Gene position: 1526711-1526148 (Counterclockwise)

Preceding gene: 57650402

Following gene: 57650400

Centisome position: 54.34

GC content: 31.91

Gene sequence:

>564_bases
ATGGTTAAAACAGTTTATGTAACAGGTTACAAATCATTCGAATTAAACATTTTTAAAGATGACGCACCTGAAGTACATTA
TTTAAAACAATTTATAAAACATAAAATTGAACAACTGTTGGATGAAGGATTAGAATGGGTGTTAATACAAGGGCAAATGG
GTATAGAATTATGGACTGCAGAAGTTGTTATTGAATTACAACGAACATATGATTCGTTAAAGTTTGCTGTAATTACACCG
TTCCAAGGACATACAGAAAAGTGGAATGAACATAATCAAAGTAAGTATGCCAACATAATTAAGCATGCAGATTATGTTGA
TAGTATTTTTCATACGTCGTATCAAGGTCCTTTTCAATTTAAACAAGCAGATCAATTTATGCTTGAACATTCGGATCAAA
CATTGCTCATTTATGATGAGGAACAAGAGGCGAGTCCTAAGTTCTTCAAGCAGATGTTAGTTGATTTTATGGATAAAACA
AACTATACTTGTGATATTGTGACGTTCGATGAATTAACAGCATTCATCAATGACTTACAGTGGTCTGAAGATCAAAGTTT
CTAA

Upstream 100 bases:

>100_bases
CATTTTAAGCGAACAAGTCGAAAGTTATTTATAGAAAAGCTTAAAAGTGTTCAATATGATTTACAAAATATATTAGATGG
CGTAACAAAAGAGGGTACTG

Downstream 100 bases:

>100_bases
TGAGGTGGAAAAAATGTCAGATGTTTCATTGAAATTATCAGCAAAAGATATTTATGAAAAAGATTTTGAAAAAACGATGG
CTCGTGGCTATAGAAGAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MVKTVYVTGYKSFELNIFKDDAPEVHYLKQFIKHKIEQLLDEGLEWVLIQGQMGIELWTAEVVIELQRTYDSLKFAVITP
FQGHTEKWNEHNQSKYANIIKHADYVDSIFHTSYQGPFQFKQADQFMLEHSDQTLLIYDEEQEASPKFFKQMLVDFMDKT
NYTCDIVTFDELTAFINDLQWSEDQSF

Sequences:

>Translated_187_residues
MVKTVYVTGYKSFELNIFKDDAPEVHYLKQFIKHKIEQLLDEGLEWVLIQGQMGIELWTAEVVIELQRTYDSLKFAVITP
FQGHTEKWNEHNQSKYANIIKHADYVDSIFHTSYQGPFQFKQADQFMLEHSDQTLLIYDEEQEASPKFFKQMLVDFMDKT
NYTCDIVTFDELTAFINDLQWSEDQSF
>Mature_187_residues
MVKTVYVTGYKSFELNIFKDDAPEVHYLKQFIKHKIEQLLDEGLEWVLIQGQMGIELWTAEVVIELQRTYDSLKFAVITP
FQGHTEKWNEHNQSKYANIIKHADYVDSIFHTSYQGPFQFKQADQFMLEHSDQTLLIYDEEQEASPKFFKQMLVDFMDKT
NYTCDIVTFDELTAFINDLQWSEDQSF

Specific function: Unknown

COG id: COG4474

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0398 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1280_STAAN (Q7A5L0)

Other databases:

- EMBL:   BA000018
- PIR:   G89922
- RefSeq:   NP_374561.1
- ProteinModelPortal:   Q7A5L0
- SMR:   Q7A5L0
- STRING:   Q7A5L0
- EnsemblBacteria:   EBSTAT00000000401
- GeneID:   1124118
- GenomeReviews:   BA000018_GR
- KEGG:   sau:SA1280
- eggNOG:   COG4474
- GeneTree:   EBGT00050000024225
- HOGENOM:   HBG338123
- OMA:   LWVTGYR
- ProtClustDB:   PRK13660
- BioCyc:   SAUR158879:SA1280-MONOMER
- HAMAP:   MF_01575
- InterPro:   IPR010697
- PIRSF:   PIRSF021290

Pfam domain/function: PF06908 DUF1273

EC number: NA

Molecular weight: Translated: 22191; Mature: 22191

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKTVYVTGYKSFELNIFKDDAPEVHYLKQFIKHKIEQLLDEGLEWVLIQGQMGIELWTA
CCEEEEEECEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEHHH
EVVIELQRTYDSLKFAVITPFQGHTEKWNEHNQSKYANIIKHADYVDSIFHTSYQGPFQF
HHHHHHHHHHCCEEEEEECCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCH
KQADQFMLEHSDQTLLIYDEEQEASPKFFKQMLVDFMDKTNYTCDIVTFDELTAFINDLQ
HHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHC
WSEDQSF
CCCCCCC
>Mature Secondary Structure
MVKTVYVTGYKSFELNIFKDDAPEVHYLKQFIKHKIEQLLDEGLEWVLIQGQMGIELWTA
CCEEEEEECEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEHHH
EVVIELQRTYDSLKFAVITPFQGHTEKWNEHNQSKYANIIKHADYVDSIFHTSYQGPFQF
HHHHHHHHHHCCEEEEEECCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCH
KQADQFMLEHSDQTLLIYDEEQEASPKFFKQMLVDFMDKTNYTCDIVTFDELTAFINDLQ
HHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHC
WSEDQSF
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11418146