Click here to switch to the map view.

The map label for this gene is 57650381

Identifier: 57650381

GI number: 57650381

Start: 1472932

End: 1473771

Strand: Reverse

Name: 57650381

Synonym: SACOL1460

Alternate gene names: NA

Gene position: 1473771-1472932 (Counterclockwise)

Preceding gene: 57650382

Following gene: 57650380

Centisome position: 52.46

GC content: 31.55

Gene sequence:

>840_bases
ATGACAAAACAGATTATAGTAACAGACTCAACATCCGATTTATCTAAAGAATACTTAGAAGCAAACAACATTCATGTAAT
TCCTTTAAGTTTAACTATTGAAGGAGCTTCATACGTTGACCAAGTAGATATTACATCAGAAGAATTTATTAATCATATTG
AAAATGATGAAGATGTAAAGACAAGTCAGCCAGCCATAGGTGAATTTATATCTGCTTATGAAGAACTAGGAAAAGATGGC
TCTGAAATCATAAGTATTCATCTTTCTTCAGGATTAAGTGGTACATATAACACTGCTTACCAAGCAAGTCAAATGGTAGA
TGCTAATGTAACTGTTATTGATTCAAAATCTATTTCTTTTGGTTTAGGGTATCAAATACAACACCTAGTAGAGCTTGTAA
AAGAAGGTGTCTCAACTTCTGAAATAGTTAAAAAGTTAAATCATTTAAGAGAAAACATTAAATTATTTGTAGTTATAGGG
CAATTGAATCAATTAATTAAAGGTGGCAGAATTAGTAAAACAAAAGGTTTGATTGGTAATCTTATGAAAATTAAACCAAT
TGGTACACTAGATGATGGTCGCTTAGAGCTTGTGCACAATGCGAGAACTCAAAATTCTAGTATCCAATACTTGAAAAAGG
AAATTGCTGAATTTATAGGAGATCATGAAATCAAATCCATTGGTGTCGCACATGCTAACGTCATTGAATATGTTGATAAA
TTGAAGAAAGTTTTTAATGAAGCTTTTCATGTGAATAATTACGATATAAATGTAACTACACCAGTTATTTCTGCACATAC
TGGTCAAGGTGCGATTGGCCTCGTAGTCCTTAAGAAGTAA

Upstream 100 bases:

>100_bases
GGGAAGTTGCCTCTTCAGTTGAAGGTAAACTAGATGAGAAAAATACAATTCCACATACCTTTCTACATTTAATTCGTAAA
AAATAAGGGGGAAAACGACC

Downstream 100 bases:

>100_bases
ATTTAATCTTTTCAGTGTTAATTACTTCCATTTCAATCCTTTATAGACTAAATTTATAATTAGATAGATAGAGGAGGTAA
TTCATATGACAAAAGAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MTKQIIVTDSTSDLSKEYLEANNIHVIPLSLTIEGASYVDQVDITSEEFINHIENDEDVKTSQPAIGEFISAYEELGKDG
SEIISIHLSSGLSGTYNTAYQASQMVDANVTVIDSKSISFGLGYQIQHLVELVKEGVSTSEIVKKLNHLRENIKLFVVIG
QLNQLIKGGRISKTKGLIGNLMKIKPIGTLDDGRLELVHNARTQNSSIQYLKKEIAEFIGDHEIKSIGVAHANVIEYVDK
LKKVFNEAFHVNNYDINVTTPVISAHTGQGAIGLVVLKK

Sequences:

>Translated_279_residues
MTKQIIVTDSTSDLSKEYLEANNIHVIPLSLTIEGASYVDQVDITSEEFINHIENDEDVKTSQPAIGEFISAYEELGKDG
SEIISIHLSSGLSGTYNTAYQASQMVDANVTVIDSKSISFGLGYQIQHLVELVKEGVSTSEIVKKLNHLRENIKLFVVIG
QLNQLIKGGRISKTKGLIGNLMKIKPIGTLDDGRLELVHNARTQNSSIQYLKKEIAEFIGDHEIKSIGVAHANVIEYVDK
LKKVFNEAFHVNNYDINVTTPVISAHTGQGAIGLVVLKK
>Mature_278_residues
TKQIIVTDSTSDLSKEYLEANNIHVIPLSLTIEGASYVDQVDITSEEFINHIENDEDVKTSQPAIGEFISAYEELGKDGS
EIISIHLSSGLSGTYNTAYQASQMVDANVTVIDSKSISFGLGYQIQHLVELVKEGVSTSEIVKKLNHLRENIKLFVVIGQ
LNQLIKGGRISKTKGLIGNLMKIKPIGTLDDGRLELVHNARTQNSSIQYLKKEIAEFIGDHEIKSIGVAHANVIEYVDKL
KKVFNEAFHVNNYDINVTTPVISAHTGQGAIGLVVLKK

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 30645; Mature: 30514

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKQIIVTDSTSDLSKEYLEANNIHVIPLSLTIEGASYVDQVDITSEEFINHIENDEDVK
CCCEEEEECCCHHHHHHHHCCCCEEEEEEEEEECCCCHHHHCCCCHHHHHHHCCCCCCCC
TSQPAIGEFISAYEELGKDGSEIISIHLSSGLSGTYNTAYQASQMVDANVTVIDSKSISF
CCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCEEEEECCCCEE
GLGYQIQHLVELVKEGVSTSEIVKKLNHLRENIKLFVVIGQLNQLIKGGRISKTKGLIGN
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCEEEEEEEHHHHHHHCCCCCCHHHHHHCC
LMKIKPIGTLDDGRLELVHNARTQNSSIQYLKKEIAEFIGDHEIKSIGVAHANVIEYVDK
CEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LKKVFNEAFHVNNYDINVTTPVISAHTGQGAIGLVVLKK
HHHHHHHHHCCCCCEEEEECCEEEECCCCCEEEEEEEEC
>Mature Secondary Structure 
TKQIIVTDSTSDLSKEYLEANNIHVIPLSLTIEGASYVDQVDITSEEFINHIENDEDVK
CCEEEEECCCHHHHHHHHCCCCEEEEEEEEEECCCCHHHHCCCCHHHHHHHCCCCCCCC
TSQPAIGEFISAYEELGKDGSEIISIHLSSGLSGTYNTAYQASQMVDANVTVIDSKSISF
CCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCEEEEECCCCEE
GLGYQIQHLVELVKEGVSTSEIVKKLNHLRENIKLFVVIGQLNQLIKGGRISKTKGLIGN
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCEEEEEEEHHHHHHHCCCCCCHHHHHHCC
LMKIKPIGTLDDGRLELVHNARTQNSSIQYLKKEIAEFIGDHEIKSIGVAHANVIEYVDK
CEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LKKVFNEAFHVNNYDINVTTPVISAHTGQGAIGLVVLKK
HHHHHHHHHCCCCCEEEEECCEEEECCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11418146 [H]