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The map label for this gene is qoxB

Identifier: 57650254

GI number: 57650254

Start: 1079066

End: 1080166

Strand: Reverse

Name: qoxB

Synonym: SACOL1070

Alternate gene names: 57650254

Gene position: 1080166-1079066 (Counterclockwise)

Preceding gene: 57651671

Following gene: 57650253

Centisome position: 38.45

GC content: 34.33

Gene sequence:

>1101_bases
GTGTCAAAATTTAAGTCTTTGCTTCTATTATTTGGCACACTAATTTTACTTAGTGGTTGTTCAAATATAGAAATTTTCAA
CGCAAAAGGGCCAGTAGCAAGTAGTCAGAAGTTCTTGATTCTTTATTCAATCGTCTTCATGCTTGTTATTTGTTTCGTTG
TACTTGGCATGTTCGCCATTTTTATTTACAAGTATAGTTATAATAAGAATGCCGAATCTGGTAAGATGCACCATAATGCC
ATCATTGAAACAATATGGTTTGTAATACCTATCATAATCGTTGCTGCTTTAGCTATTCCTACAGTTAAAACTTTATACGA
TTACGAAAAACCACCGAAGAGTGAGAAAGATCCAATGGTTGTATATGCAGTAAGTGCAGGATACAAATGGTTCTTTGCTT
ATCCAGATGAACATATAGAGACTGTTAATACATTAACAATCCCTAAAGATCGTCCTGTTGTATTTAAGCTTCAAGCTATG
GATACAATGACAAGTTTCTGGATTCCACAATTAGGTGGTCAAAAATATGCCATGACTGGCATGACAATGAATTGGACGTT
AGAAGCATCTCAAACTGGTACGTTCAGAGGTCGTAACTCTAACTTCAATGGTGAAGGATTCTCACGTCAAACATTTAAAG
TAAATGCCGTTAGTCAAAAAGACTACGACAAATGGGTGAAAGAAGTTAAAGGTAAGAAAACGTTAGATCAAGATACATTT
GATAAACAATTATTACCAAGCACACCTAATAAAGCTTTAGAATTTAATGGTACACATATGGCGTTTGTTGATCCAGCAGC
CGATCCAGAATACATCTTCTATGCATATAAACGTTTCAATTTCGAATTGAAAGATCCAAACTTCACTAGTGAAGAAAATA
TGTTTAAAGATGTATCAGACAAACCATTAATACCTGCTCGTAAAGCTCAAATTACAAATGCGAACTATAAACGACATGGT
ATGAAGTTGATGATTCTTGGAAATGACGAACCATATAACAATGAGTTCAAGAAAGATGAATCGAAAAATGCGAAAGAAAT
GAAGAAAATTTCAAAAGATGCGCAAGATCAAGACAATGATGATCATGGAGGTGGACATTAA

Upstream 100 bases:

>100_bases
CAATTTTATTAATTTTTTTCCCATAAGCCCTTGTAAATATTGTGTAATAACTTAAAATTAATGTTAAGCCCTACATTTGT
AGTATTAGGAGGTCAAAAAA

Downstream 100 bases:

>100_bases
TGAATTTTCCATGGGATCAATTACTAGTTAAAGGTAACTGGATGATTACAATGGCACAAATTGGTGCCCCATTCTTAGTT
ATTGGTTTAATCGCAGTAAT

Product: quinol oxidase subunit II

Products: NA

Alternate protein names: Quinol oxidase polypeptide II

Number of amino acids: Translated: 366; Mature: 365

Protein sequence:

>366_residues
MSKFKSLLLLFGTLILLSGCSNIEIFNAKGPVASSQKFLILYSIVFMLVICFVVLGMFAIFIYKYSYNKNAESGKMHHNA
IIETIWFVIPIIIVAALAIPTVKTLYDYEKPPKSEKDPMVVYAVSAGYKWFFAYPDEHIETVNTLTIPKDRPVVFKLQAM
DTMTSFWIPQLGGQKYAMTGMTMNWTLEASQTGTFRGRNSNFNGEGFSRQTFKVNAVSQKDYDKWVKEVKGKKTLDQDTF
DKQLLPSTPNKALEFNGTHMAFVDPAADPEYIFYAYKRFNFELKDPNFTSEENMFKDVSDKPLIPARKAQITNANYKRHG
MKLMILGNDEPYNNEFKKDESKNAKEMKKISKDAQDQDNDDHGGGH

Sequences:

>Translated_366_residues
MSKFKSLLLLFGTLILLSGCSNIEIFNAKGPVASSQKFLILYSIVFMLVICFVVLGMFAIFIYKYSYNKNAESGKMHHNA
IIETIWFVIPIIIVAALAIPTVKTLYDYEKPPKSEKDPMVVYAVSAGYKWFFAYPDEHIETVNTLTIPKDRPVVFKLQAM
DTMTSFWIPQLGGQKYAMTGMTMNWTLEASQTGTFRGRNSNFNGEGFSRQTFKVNAVSQKDYDKWVKEVKGKKTLDQDTF
DKQLLPSTPNKALEFNGTHMAFVDPAADPEYIFYAYKRFNFELKDPNFTSEENMFKDVSDKPLIPARKAQITNANYKRHG
MKLMILGNDEPYNNEFKKDESKNAKEMKKISKDAQDQDNDDHGGGH
>Mature_365_residues
SKFKSLLLLFGTLILLSGCSNIEIFNAKGPVASSQKFLILYSIVFMLVICFVVLGMFAIFIYKYSYNKNAESGKMHHNAI
IETIWFVIPIIIVAALAIPTVKTLYDYEKPPKSEKDPMVVYAVSAGYKWFFAYPDEHIETVNTLTIPKDRPVVFKLQAMD
TMTSFWIPQLGGQKYAMTGMTMNWTLEASQTGTFRGRNSNFNGEGFSRQTFKVNAVSQKDYDKWVKEVKGKKTLDQDTFD
KQLLPSTPNKALEFNGTHMAFVDPAADPEYIFYAYKRFNFELKDPNFTSEENMFKDVSDKPLIPARKAQITNANYKRHGM
KLMILGNDEPYNNEFKKDESKNAKEMKKISKDAQDQDNDDHGGGH

Specific function: Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Subunit II transfers the electrons from a quinol to the binuclear center of the catalytic subunit I

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family

Homologues:

Organism=Escherichia coli, GI1786635, Length=256, Percent_Identity=35.9375, Blast_Score=152, Evalue=3e-38,
Organism=Saccharomyces cerevisiae, GI6226540, Length=208, Percent_Identity=25.9615384615385, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): QOX2_STAA3 (Q2FI17)

Other databases:

- EMBL:   CP000255
- RefSeq:   YP_493661.1
- ProteinModelPortal:   Q2FI17
- STRING:   Q2FI17
- EnsemblBacteria:   EBSTAT00000036783
- GeneID:   3914886
- GenomeReviews:   CP000255_GR
- KEGG:   saa:SAUSA300_0963
- eggNOG:   COG1622
- GeneTree:   EBGT00050000023818
- HOGENOM:   HBG313936
- OMA:   STKIEIA
- ProtClustDB:   CLSK885109
- InterPro:   IPR012141
- InterPro:   IPR010514
- InterPro:   IPR008972
- InterPro:   IPR006332
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759
- Gene3D:   G3DSA:1.10.287.90
- Gene3D:   G3DSA:2.60.40.420
- PANTHER:   PTHR22888
- PIRSF:   PIRSF000292
- TIGRFAMs:   TIGR01432

Pfam domain/function: PF00116 COX2; PF02790 COX2_TM; PF06481 COX_ARM; SSF49503 Cupredoxin; SSF81464 Cyt_c_oxidase_II-like_TM

EC number: 1.9.3.-

Molecular weight: Translated: 41777; Mature: 41646

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: PS50857 COX2_CUA; PS50999 COX2_TM; PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xcc73cb0)-; HASH(0xd5ad050)-;

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKFKSLLLLFGTLILLSGCSNIEIFNAKGPVASSQKFLILYSIVFMLVICFVVLGMFAI
CCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FIYKYSYNKNAESGKMHHNAIIETIWFVIPIIIVAALAIPTVKTLYDYEKPPKSEKDPMV
HHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE
VYAVSAGYKWFFAYPDEHIETVNTLTIPKDRPVVFKLQAMDTMTSFWIPQLGGQKYAMTG
EEEEECCCEEEEECCHHHHHHHHEEECCCCCCEEEEEHHHHHHHHHHCCCCCCCEEEEEC
MTMNWTLEASQTGTFRGRNSNFNGEGFSRQTFKVNAVSQKDYDKWVKEVKGKKTLDQDTF
EEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCHHH
DKQLLPSTPNKALEFNGTHMAFVDPAADPEYIFYAYKRFNFELKDPNFTSEENMFKDVSD
HHCCCCCCCCCCEEECCCEEEEECCCCCCCEEEEEEEEEEEEECCCCCCCHHHHHHCCCC
KPLIPARKAQITNANYKRHGMKLMILGNDEPYNNEFKKDESKNAKEMKKISKDAQDQDND
CCCCCCHHHEECCCCHHHCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
DHGGGH
CCCCCH
>Mature Secondary Structure 
SKFKSLLLLFGTLILLSGCSNIEIFNAKGPVASSQKFLILYSIVFMLVICFVVLGMFAI
CHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FIYKYSYNKNAESGKMHHNAIIETIWFVIPIIIVAALAIPTVKTLYDYEKPPKSEKDPMV
HHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE
VYAVSAGYKWFFAYPDEHIETVNTLTIPKDRPVVFKLQAMDTMTSFWIPQLGGQKYAMTG
EEEEECCCEEEEECCHHHHHHHHEEECCCCCCEEEEEHHHHHHHHHHCCCCCCCEEEEEC
MTMNWTLEASQTGTFRGRNSNFNGEGFSRQTFKVNAVSQKDYDKWVKEVKGKKTLDQDTF
EEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCHHH
DKQLLPSTPNKALEFNGTHMAFVDPAADPEYIFYAYKRFNFELKDPNFTSEENMFKDVSD
HHCCCCCCCCCCEEECCCEEEEECCCCCCCEEEEEEEEEEEEECCCCCCCHHHHHHCCCC
KPLIPARKAQITNANYKRHGMKLMILGNDEPYNNEFKKDESKNAKEMKKISKDAQDQDND
CCCCCCHHHEECCCCHHHCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
DHGGGH
CCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA