Click here to switch to the map view.

The map label for this gene is 57650249

Identifier: 57650249

GI number: 57650249

Start: 1072798

End: 1074015

Strand: Reverse

Name: 57650249

Synonym: SACOL1065

Alternate gene names: NA

Gene position: 1074015-1072798 (Counterclockwise)

Preceding gene: 57650251

Following gene: 57650248

Centisome position: 38.23

GC content: 32.51

Gene sequence:

>1218_bases
ATGAATAAATTTTTAAAATACTTTTTGATCCTTCTAGCATTGGTTCTCATTGTTGTTCCAATAGTCTTCGCTACGTTACT
TTTTAAAACGTCCCAAGATGCATTCGAATCTTCTCAAGACAGCAAAAATGCTAATCGTCAATCCAACTTAAGAGATAATA
AAGTCAATCCCGAAGAACAACCTATCTCTATTCTTTTCTTAGGTATCGATGATAACGATGGAAGAAGAAAAAAAGGACAG
GATGCTGAACACTCTAGATCAGACGCTATGATTTTAACTACTTTTAATCAATCAAAACATCAAATTAGAATGCTTAGTAT
TCCACGTGATACTATCAGCTACATTCCTAAAGTTGGCTATTACGATAAGATTACCCATGCACATGCATATGGTGGTCCAA
TTGCCGCAATGGATTCGGTAGAAGCTACCATGAATGTACCTGTTGATTATTATGTGAGAGTCAATATGAAAGCATTTGTC
GAGGCTGTAAATGAGCTTGGTGGCATATACTATGATGTGCCATACGACTTAAATGAACCTAACACAGATGATACTGGTAA
GATTAAAATTAAAAAAGGGTACCAAAAATTAAATGGTGATGAGGCTTTAGCAGTTGCTAGAACTAGACATCATGATTCAG
ACTTAAAACGTGGACAACGTCAAATGGAATTAATTAAGATTTTATTCCAAAAAGCACAGGAAGTTGATTCTATTGATAAA
CTTGATAACGTGATTCAAATTGTAGGTAAAAATGCAAAGCATAATTTAACTAACTCTGAAATTAAAGCTTTAGCAAAAAT
GTACTTAACAAATGATGTTGAAATTAAAACTGCGCAATTAAAAGGTAAAGATGATATGTTAAATGGTATTTACTATTATC
ATCCAAGTGTTGAAAGCATTCAAAAATATGCAAACTTACTTCGTAAAGACTTAGAATTATCACCTATTAATGATAAAAAT
GATTTCTTAGATCAACGTGTCATTAATCATTATGGTTCATTAATACCATTAACGCCTTTAGATAATAGTTTATTGAGAAA
AGAACAAAATGATACGACAGATAAAGATAAGACATCTAACGAGAACAGTGATTCAACTAATAACAGTGATTCCAGCAATC
AACAACAACCTGCTACAGATCAAAACTCAAATCAAAATCAAGGTGGCACACAACAAGCGCCACAAGCTTCAAATAACCAA
AATGGTGTTGTAAATTAA

Upstream 100 bases:

>100_bases
ATAATGTATTAGTAATGAAGTTGTATAAATATCGTTCAACTAATTATATTTTAAAATTATGATTATGATTTAACAAAAAT
TTAATATAGGAGCATCAATC

Downstream 100 bases:

>100_bases
TATTATATGACGATTAACATTTACTATTTATGAAAGGAGCATCATACATGAGTAGAAAAACATACGAAAAGATTGCAAAT
ATAAATGGCATGTTTAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: ORF1

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MNKFLKYFLILLALVLIVVPIVFATLLFKTSQDAFESSQDSKNANRQSNLRDNKVNPEEQPISILFLGIDDNDGRRKKGQ
DAEHSRSDAMILTTFNQSKHQIRMLSIPRDTISYIPKVGYYDKITHAHAYGGPIAAMDSVEATMNVPVDYYVRVNMKAFV
EAVNELGGIYYDVPYDLNEPNTDDTGKIKIKKGYQKLNGDEALAVARTRHHDSDLKRGQRQMELIKILFQKAQEVDSIDK
LDNVIQIVGKNAKHNLTNSEIKALAKMYLTNDVEIKTAQLKGKDDMLNGIYYYHPSVESIQKYANLLRKDLELSPINDKN
DFLDQRVINHYGSLIPLTPLDNSLLRKEQNDTTDKDKTSNENSDSTNNSDSSNQQQPATDQNSNQNQGGTQQAPQASNNQ
NGVVN

Sequences:

>Translated_405_residues
MNKFLKYFLILLALVLIVVPIVFATLLFKTSQDAFESSQDSKNANRQSNLRDNKVNPEEQPISILFLGIDDNDGRRKKGQ
DAEHSRSDAMILTTFNQSKHQIRMLSIPRDTISYIPKVGYYDKITHAHAYGGPIAAMDSVEATMNVPVDYYVRVNMKAFV
EAVNELGGIYYDVPYDLNEPNTDDTGKIKIKKGYQKLNGDEALAVARTRHHDSDLKRGQRQMELIKILFQKAQEVDSIDK
LDNVIQIVGKNAKHNLTNSEIKALAKMYLTNDVEIKTAQLKGKDDMLNGIYYYHPSVESIQKYANLLRKDLELSPINDKN
DFLDQRVINHYGSLIPLTPLDNSLLRKEQNDTTDKDKTSNENSDSTNNSDSSNQQQPATDQNSNQNQGGTQQAPQASNNQ
NGVVN
>Mature_405_residues
MNKFLKYFLILLALVLIVVPIVFATLLFKTSQDAFESSQDSKNANRQSNLRDNKVNPEEQPISILFLGIDDNDGRRKKGQ
DAEHSRSDAMILTTFNQSKHQIRMLSIPRDTISYIPKVGYYDKITHAHAYGGPIAAMDSVEATMNVPVDYYVRVNMKAFV
EAVNELGGIYYDVPYDLNEPNTDDTGKIKIKKGYQKLNGDEALAVARTRHHDSDLKRGQRQMELIKILFQKAQEVDSIDK
LDNVIQIVGKNAKHNLTNSEIKALAKMYLTNDVEIKTAQLKGKDDMLNGIYYYHPSVESIQKYANLLRKDLELSPINDKN
DFLDQRVINHYGSLIPLTPLDNSLLRKEQNDTTDKDKTSNENSDSTNNSDSSNQQQPATDQNSNQNQGGTQQAPQASNNQ
NGVVN

Specific function: Unknown

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y997_STAA8 (P52078)

Other databases:

- EMBL:   CP000253
- EMBL:   D17366
- EMBL:   L41499
- PIR:   A55598
- RefSeq:   YP_499549.1
- STRING:   P52078
- EnsemblBacteria:   EBSTAT00000028262
- GeneID:   3920397
- GenomeReviews:   CP000253_GR
- KEGG:   sao:SAOUHSC_00997
- eggNOG:   COG1316
- GeneTree:   EBGT00050000023898
- HOGENOM:   HBG304505
- OMA:   TEVKESE
- ProtClustDB:   CLSK885105
- BioCyc:   SAUR93061:SAOUHSC_00997-MONOMER
- InterPro:   IPR004474
- TIGRFAMs:   TIGR00350

Pfam domain/function: PF03816 LytR_cpsA_psr

EC number: NA

Molecular weight: Translated: 45686; Mature: 45686

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKFLKYFLILLALVLIVVPIVFATLLFKTSQDAFESSQDSKNANRQSNLRDNKVNPEEQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHCCCCCCCCCCCCC
PISILFLGIDDNDGRRKKGQDAEHSRSDAMILTTFNQSKHQIRMLSIPRDTISYIPKVGY
CEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCHHHHHHCCCCCC
YDKITHAHAYGGPIAAMDSVEATMNVPVDYYVRVNMKAFVEAVNELGGIYYDVPYDLNEP
HHHHHHHHCCCCCCHHHHCCHHHCCCCEEEEEEECHHHHHHHHHHHCCEEEECCCCCCCC
NTDDTGKIKIKKGYQKLNGDEALAVARTRHHDSDLKRGQRQMELIKILFQKAQEVDSIDK
CCCCCCEEEEECCHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDNVIQIVGKNAKHNLTNSEIKALAKMYLTNDVEIKTAQLKGKDDMLNGIYYYHPSVESI
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHCCEEEECCCHHHH
QKYANLLRKDLELSPINDKNDFLDQRVINHYGSLIPLTPLDNSLLRKEQNDTTDKDKTSN
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCHHHHHCCCCCCCCCCCCCC
ENSDSTNNSDSSNQQQPATDQNSNQNQGGTQQAPQASNNQNGVVN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNKFLKYFLILLALVLIVVPIVFATLLFKTSQDAFESSQDSKNANRQSNLRDNKVNPEEQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHCCCCCCCCCCCCC
PISILFLGIDDNDGRRKKGQDAEHSRSDAMILTTFNQSKHQIRMLSIPRDTISYIPKVGY
CEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCHHHHHHCCCCCC
YDKITHAHAYGGPIAAMDSVEATMNVPVDYYVRVNMKAFVEAVNELGGIYYDVPYDLNEP
HHHHHHHHCCCCCCHHHHCCHHHCCCCEEEEEEECHHHHHHHHHHHCCEEEECCCCCCCC
NTDDTGKIKIKKGYQKLNGDEALAVARTRHHDSDLKRGQRQMELIKILFQKAQEVDSIDK
CCCCCCEEEEECCHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDNVIQIVGKNAKHNLTNSEIKALAKMYLTNDVEIKTAQLKGKDDMLNGIYYYHPSVESI
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHCCEEEECCCHHHH
QKYANLLRKDLELSPINDKNDFLDQRVINHYGSLIPLTPLDNSLLRKEQNDTTDKDKTSN
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCHHHHHCCCCCCCCCCCCCC
ENSDSTNNSDSSNQQQPATDQNSNQNQGGTQQAPQASNNQNGVVN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7816834