Click here to switch to the map view.

The map label for this gene is yisU [H]

Identifier: 57650144

GI number: 57650144

Start: 892991

End: 893608

Strand: Reverse

Name: yisU [H]

Synonym: SACOL0870

Alternate gene names: 57650144

Gene position: 893608-892991 (Counterclockwise)

Preceding gene: 57650145

Following gene: 57650142

Centisome position: 31.81

GC content: 30.42

Gene sequence:

>618_bases
ATGGTAACCGCAATTATTCATGGATTTATCTTAGCGATTGGTCTAATTTTACCTTTAGGTGCACAAAATGTATTTATTTT
TAACCAAGGAGCTAATCAACCAAAATATAGATATGTATTGCCTGCAATAATTACAGCCGGGTTGTCAGACAGCTTACTTA
TTATTATTGCAGTGGTAGGAGTATCTATCATTATTATGTCTTTACCTGTACTTCAAGCAATTATTTATATAGTTGGTTTA
ATTTTCTTGATGTATATGGCTTGGACCATTTGGCATGATAAACCCTCAACAGATGGAGAAACTCAAATTATGTCTCCAAT
GAAACAAGTAAGTTTTGCTTTATCAGTTTCATTACTCAATCCACATGCTATTTTAGATACAATTGGAGTAATTGGTAGTA
GTGCTGCATTATATAGTGGCAGCAATAAAATTGCGTTTACAATCGCTTGTATTAGCGTTTCATGGTTATGGTTCTTTTTA
CTCGCAATTTTAGGAAAAATGGTTGGATCAATTGATAAAACCGGAAAATTATTAACAATAATCAATAAAATATCAAGCAT
AATAATTATTATTGTTGCTCTGATGATATTACAAAAACTTATTCAATTATTATTCTAA

Upstream 100 bases:

>100_bases
TTTCATACAACTACTCTACTATTGAGTAGTTGTTTTTTATTTGATATGATAACAATAAGTTTTTTCAGAATATTCTATGT
TTTAGGGGTGTCAAAACTTA

Downstream 100 bases:

>100_bases
AGCGTTATGTAGTTGTATTTTAAAAGCGTTATACAAAAGACATACTTGTGTCTATGTATAACGCTTTATTTATTATAAAT
TTGGATCAATTAACTCAACA

Product: LysE/YggA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MVTAIIHGFILAIGLILPLGAQNVFIFNQGANQPKYRYVLPAIITAGLSDSLLIIIAVVGVSIIIMSLPVLQAIIYIVGL
IFLMYMAWTIWHDKPSTDGETQIMSPMKQVSFALSVSLLNPHAILDTIGVIGSSAALYSGSNKIAFTIACISVSWLWFFL
LAILGKMVGSIDKTGKLLTIINKISSIIIIIVALMILQKLIQLLF

Sequences:

>Translated_205_residues
MVTAIIHGFILAIGLILPLGAQNVFIFNQGANQPKYRYVLPAIITAGLSDSLLIIIAVVGVSIIIMSLPVLQAIIYIVGL
IFLMYMAWTIWHDKPSTDGETQIMSPMKQVSFALSVSLLNPHAILDTIGVIGSSAALYSGSNKIAFTIACISVSWLWFFL
LAILGKMVGSIDKTGKLLTIINKISSIIIIIVALMILQKLIQLLF
>Mature_205_residues
MVTAIIHGFILAIGLILPLGAQNVFIFNQGANQPKYRYVLPAIITAGLSDSLLIIIAVVGVSIIIMSLPVLQAIIYIVGL
IFLMYMAWTIWHDKPSTDGETQIMSPMKQVSFALSVSLLNPHAILDTIGVIGSSAALYSGSNKIAFTIACISVSWLWFFL
LAILGKMVGSIDKTGKLLTIINKISSIIIIIVALMILQKLIQLLF

Specific function: Unknown

COG id: COG1279

COG function: function code R; Lysine efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LysE/ArgO transporter (TC 2.A.75) family [H]

Homologues:

Organism=Escherichia coli, GI1789290, Length=204, Percent_Identity=31.8627450980392, Blast_Score=84, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004777
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 22212; Mature: 22212

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTAIIHGFILAIGLILPLGAQNVFIFNQGANQPKYRYVLPAIITAGLSDSLLIIIAVVG
CHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHH
VSIIIMSLPVLQAIIYIVGLIFLMYMAWTIWHDKPSTDGETQIMSPMKQVSFALSVSLLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PHAILDTIGVIGSSAALYSGSNKIAFTIACISVSWLWFFLLAILGKMVGSIDKTGKLLTI
HHHHHHHHHHHCCCHHEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
INKISSIIIIIVALMILQKLIQLLF
HHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MVTAIIHGFILAIGLILPLGAQNVFIFNQGANQPKYRYVLPAIITAGLSDSLLIIIAVVG
CHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHH
VSIIIMSLPVLQAIIYIVGLIFLMYMAWTIWHDKPSTDGETQIMSPMKQVSFALSVSLLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PHAILDTIGVIGSSAALYSGSNKIAFTIACISVSWLWFFLLAILGKMVGSIDKTGKLLTI
HHHHHHHHHHHCCCHHEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
INKISSIIIIIVALMILQKLIQLLF
HHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377 [H]