Click here to switch to the map view.

The map label for this gene is 57238317

Identifier: 57238317

GI number: 57238317

Start: 1355059

End: 1356225

Strand: Reverse

Name: 57238317

Synonym: CJE1458

Alternate gene names: NA

Gene position: 1356225-1355059 (Counterclockwise)

Preceding gene: 57238318

Following gene: 57238316

Centisome position: 76.29

GC content: 32.48

Gene sequence:

>1167_bases
ATGCAAAAATTAAGACAAGAAATAGGAAATTTACACGAACAAATGGTGGCTTTATCAAATAAGGCTAAAAACGAGCAAAG
AAGCTTTAGTGCTGAAGAAAACACAAAATACGAAGCTTTAATGCAAGATTTTGAAAGTAAAAGAAAAGAACTCTCAAGAG
CTGAAGCAGAGCTAGAAAGAGAAAAATATTTAAATGAGGTTGTAAGCCCTGTTTTAGGACAAAATCCTAAAGGAGAGGAT
GAAGATTTAAATGAAGAAAATCATATGCGTTCTTTTGTGAATTATTTAAGAAATGGAAGTATTGACAATATTTTAAAAAG
AAATGTTTTAAATGAAAGCACAGCAGAGCAAGGTGGGATTTTAGTCCCTACAACTTTGCAAAGTAAAATAAGAGAAAAAT
TAAATGATCTTAGTGTTATTAGAAAGATTGCTACAGTGCAAAAAAGCTCTAGCAATCAAATTATACCTGTTTTTGATGAG
ATGGGGGAATTTTCTTGGCTTGGCGAACAGGAAAGCTTTACTGAAGTTAGTGCTAAATTTAGTTCTTTAAGTATAGGCGC
ACATAAGCTTGGCGGTATTATTAAAATCAGCGAAGAACTCTTGAGTGACAACATTGCAAATCTTGAAAGTTTTATAGTGC
GAAAAGCCGCTGAAAAGATTTCAAAAACAGAAGAATTAAGTTTTATTAATGGAGATGGAAATAAAAAACCAACAGGACTT
AAAAATGCTAAAAAAGCGTTTACACTTGCTTCAAATCAAGGTATTACAAGCAATGATATCATAGATGCTTTTTTCAGTTT
AGACAGTGCTTATCGTAAAAATGCCACTTGGCTTGTAGGAGATGAGTTTATGAAAGCTATTTATAAACTTACAGATAATG
ATAATCGCCCATTGTGGCTACCTGCTTTAAGTGCTAATGGCTATGACACAATTTTAGGTAAAAAGGTAGTTTATTGTTCT
GGTGTTGATGGTTTTGGTGCAAGCAAAGTCCCTGCATTTTTTGGAGATTTTAGTTTTTATGAAATTTGGGATAGATCAAG
TATGAGTTTTACAAGACTTAATGAGCTTTACTCTCAAAATGATTTAATAGGTATTAAAGTGCGTTTAAGACTTGATGCAA
AGCTTATGGATAATTCGGCAGTTTGTAAAATTGTATGCCCTGCTTAA

Upstream 100 bases:

>100_bases
GAAGAAGATGAAGAAAAAAAGAAAATCAAAGCCTTAAGTGAAGCTAGAGAGCGAGAACTTAAACTTTTAGAAATATCAAT
TTAAACAAGGAGAAAAAACA

Downstream 100 bases:

>100_bases
AGGATGGAAGATGAAAAAAGTAGTTTTCAAGTGTTGTTTAAGCGGTAATATTTTTTATAAAAAAGGTGATGAGGTTTTAC
TTGAAGATAGTGAAGCCTTA

Product: HK97 family major capsid protein

Products: NA

Alternate protein names: HK97 Family Phage Capsid Protein; Phage Capsid Protein HK; HK97 Family Capsid Protein; Capsid Protein; Phage Capsid Protein; Capsid Protein Of Prophage; Prophage; Phage Capsid Family; Phage Prohead Protease; Phage Capsid Protein Gp; Capsid; Phage Capsid Protein-Like Protein; Phage Prohead Protease And Phage Capsid Protein; Phage Phi-C31 Capsid; Capsid Protein HK; Capsid-Like Protein; HK97 Family Phage Prohead Protease/Phage Capsid Protein; Phage Capsid Family Protein

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MQKLRQEIGNLHEQMVALSNKAKNEQRSFSAEENTKYEALMQDFESKRKELSRAEAELEREKYLNEVVSPVLGQNPKGED
EDLNEENHMRSFVNYLRNGSIDNILKRNVLNESTAEQGGILVPTTLQSKIREKLNDLSVIRKIATVQKSSSNQIIPVFDE
MGEFSWLGEQESFTEVSAKFSSLSIGAHKLGGIIKISEELLSDNIANLESFIVRKAAEKISKTEELSFINGDGNKKPTGL
KNAKKAFTLASNQGITSNDIIDAFFSLDSAYRKNATWLVGDEFMKAIYKLTDNDNRPLWLPALSANGYDTILGKKVVYCS
GVDGFGASKVPAFFGDFSFYEIWDRSSMSFTRLNELYSQNDLIGIKVRLRLDAKLMDNSAVCKIVCPA

Sequences:

>Translated_388_residues
MQKLRQEIGNLHEQMVALSNKAKNEQRSFSAEENTKYEALMQDFESKRKELSRAEAELEREKYLNEVVSPVLGQNPKGED
EDLNEENHMRSFVNYLRNGSIDNILKRNVLNESTAEQGGILVPTTLQSKIREKLNDLSVIRKIATVQKSSSNQIIPVFDE
MGEFSWLGEQESFTEVSAKFSSLSIGAHKLGGIIKISEELLSDNIANLESFIVRKAAEKISKTEELSFINGDGNKKPTGL
KNAKKAFTLASNQGITSNDIIDAFFSLDSAYRKNATWLVGDEFMKAIYKLTDNDNRPLWLPALSANGYDTILGKKVVYCS
GVDGFGASKVPAFFGDFSFYEIWDRSSMSFTRLNELYSQNDLIGIKVRLRLDAKLMDNSAVCKIVCPA
>Mature_388_residues
MQKLRQEIGNLHEQMVALSNKAKNEQRSFSAEENTKYEALMQDFESKRKELSRAEAELEREKYLNEVVSPVLGQNPKGED
EDLNEENHMRSFVNYLRNGSIDNILKRNVLNESTAEQGGILVPTTLQSKIREKLNDLSVIRKIATVQKSSSNQIIPVFDE
MGEFSWLGEQESFTEVSAKFSSLSIGAHKLGGIIKISEELLSDNIANLESFIVRKAAEKISKTEELSFINGDGNKKPTGL
KNAKKAFTLASNQGITSNDIIDAFFSLDSAYRKNATWLVGDEFMKAIYKLTDNDNRPLWLPALSANGYDTILGKKVVYCS
GVDGFGASKVPAFFGDFSFYEIWDRSSMSFTRLNELYSQNDLIGIKVRLRLDAKLMDNSAVCKIVCPA

Specific function: Unknown

COG id: COG4653

COG function: function code R; Predicted phage phi-C31 gp36 major capsid-like protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43520; Mature: 43520

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKLRQEIGNLHEQMVALSNKAKNEQRSFSAEENTKYEALMQDFESKRKELSRAEAELER
CHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EKYLNEVVSPVLGQNPKGEDEDLNEENHMRSFVNYLRNGSIDNILKRNVLNESTAEQGGI
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHCCCE
LVPTTLQSKIREKLNDLSVIRKIATVQKSSSNQIIPVFDEMGEFSWLGEQESFTEVSAKF
EECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHCCCCEECCCCHHHHHHHHHH
SSLSIGAHKLGGIIKISEELLSDNIANLESFIVRKAAEKISKTEELSFINGDGNKKPTGL
HHHCCCHHHHCCHHEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCC
KNAKKAFTLASNQGITSNDIIDAFFSLDSAYRKNATWLVGDEFMKAIYKLTDNDNRPLWL
CHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHCCCCCCEEEE
PALSANGYDTILGKKVVYCSGVDGFGASKVPAFFGDFSFYEIWDRSSMSFTRLNELYSQN
EECCCCCCHHHHCCEEEEEECCCCCCCCCCCHHHCCCHHHHHHCCCCCHHHHHHHHHCCC
DLIGIKVRLRLDAKLMDNSAVCKIVCPA
CEEEEEEEEEECCEECCCCCEEEEECCC
>Mature Secondary Structure
MQKLRQEIGNLHEQMVALSNKAKNEQRSFSAEENTKYEALMQDFESKRKELSRAEAELER
CHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EKYLNEVVSPVLGQNPKGEDEDLNEENHMRSFVNYLRNGSIDNILKRNVLNESTAEQGGI
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHCCCE
LVPTTLQSKIREKLNDLSVIRKIATVQKSSSNQIIPVFDEMGEFSWLGEQESFTEVSAKF
EECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHCCCCEECCCCHHHHHHHHHH
SSLSIGAHKLGGIIKISEELLSDNIANLESFIVRKAAEKISKTEELSFINGDGNKKPTGL
HHHCCCHHHHCCHHEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCC
KNAKKAFTLASNQGITSNDIIDAFFSLDSAYRKNATWLVGDEFMKAIYKLTDNDNRPLWL
CHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHCCCCCCEEEE
PALSANGYDTILGKKVVYCSGVDGFGASKVPAFFGDFSFYEIWDRSSMSFTRLNELYSQN
EECCCCCCHHHHCCEEEEEECCCCCCCCCCCHHHCCCHHHHHHCCCCCHHHHHHHHHCCC
DLIGIKVRLRLDAKLMDNSAVCKIVCPA
CEEEEEEEEEECCEECCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA