Definition Campylobacter jejuni RM1221, complete genome.
Accession NC_003912
Length 1,777,831

Click here to switch to the map view.

The map label for this gene is 57238313

Identifier: 57238313

GI number: 57238313

Start: 1354033

End: 1354350

Strand: Reverse

Name: 57238313

Synonym: CJE1454

Alternate gene names: NA

Gene position: 1354350-1354033 (Counterclockwise)

Preceding gene: 57238314

Following gene: 57238312

Centisome position: 76.18

GC content: 27.36

Gene sequence:

>318_bases
ATGAAAGCAAATGGATTTAAGCATAGAGTTAAAATTTACAAAAAAGAACAAAGCAAAAATGAGTTTTTAGAAAGCGATTT
TACGCAAGATTTACTTTTTAAAGAAGTTTATGCAAGTTGTAAAAATCTAAGTGCGGATGTTAAAGAGTTAAATAGTGGCT
TATCTTTAGTCGCTACGCATGAATTTGAGCTTAGATTTTTAGAGCTTGATTTTTCTTATTTTCTAGTTTTTAGAGATGAA
AAATATGAGATTGTAAGCTTGGAAGATGAAAGCCAAAACAAGAAATTTTTAAAAATAAAAGCAAGGAAATTTCAATGA

Upstream 100 bases:

>100_bases
AAATTATGTTTTAATGGCTTTTGATGGTGTGAGTATGCCTAAAATTTCAAGTGCTTTAATCACTCGCTACAAAATAGCTT
ATTTTTAAAAGGCAATGGCA

Downstream 100 bases:

>100_bases
ATAAAATATCTTTCATTAATACTTTACCTAAAGCACCTGATATGGCTAATCCTGTTGATTTTGACAAGGATGCTAATAAC
TTTGTTAATGCGCTTGTTCC

Product: phage head-tail adaptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MKANGFKHRVKIYKKEQSKNEFLESDFTQDLLFKEVYASCKNLSADVKELNSGLSLVATHEFELRFLELDFSYFLVFRDE
KYEIVSLEDESQNKKFLKIKARKFQ

Sequences:

>Translated_105_residues
MKANGFKHRVKIYKKEQSKNEFLESDFTQDLLFKEVYASCKNLSADVKELNSGLSLVATHEFELRFLELDFSYFLVFRDE
KYEIVSLEDESQNKKFLKIKARKFQ
>Mature_105_residues
MKANGFKHRVKIYKKEQSKNEFLESDFTQDLLFKEVYASCKNLSADVKELNSGLSLVATHEFELRFLELDFSYFLVFRDE
KYEIVSLEDESQNKKFLKIKARKFQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12529; Mature: 12529

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKANGFKHRVKIYKKEQSKNEFLESDFTQDLLFKEVYASCKNLSADVKELNSGLSLVATH
CCCCCCHHHEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEEEE
EFELRFLELDFSYFLVFRDEKYEIVSLEDESQNKKFLKIKARKFQ
CEEEEEEEECEEEEEEEECCCEEEEEECCCCCCCEEEEEEEECCC
>Mature Secondary Structure
MKANGFKHRVKIYKKEQSKNEFLESDFTQDLLFKEVYASCKNLSADVKELNSGLSLVATH
CCCCCCHHHEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEEEE
EFELRFLELDFSYFLVFRDEKYEIVSLEDESQNKKFLKIKARKFQ
CEEEEEEEECEEEEEEEECCCEEEEEECCCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA