| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57238147
Identifier: 57238147
GI number: 57238147
Start: 1328365
End: 1329558
Strand: Reverse
Name: 57238147
Synonym: CJE1411
Alternate gene names: NA
Gene position: 1329558-1328365 (Counterclockwise)
Preceding gene: 57238148
Following gene: 57238146
Centisome position: 74.79
GC content: 27.72
Gene sequence:
>1194_bases ATGAGAAAAAATATTCTTATCTTTTTTTGTTTTTTTTTGTTTGTTGATATAAGTTTAGCAAACGCTATAAATGAAAAAAC AAAAAGTTTAGAAGAAAATAAACGCATACAAGAACAGTTAAATAAAAAACTTGAAGATTTGGCTAGCGATATTTTAAATG GTGAAAAAAGTTTGAAAGATCTAAGTTTGCAAATTGAAAGCTTAAATTCACAAACTTCTAAGCTTGAAGCAAGTGCTAAG GCTCAAAATCAAGAGTTAAACACCCTTACAAGCCAAAATGAAGATTTGCTTAAAAGTAAATCAAATATGGAAGGTAAGCT TATATCTTTAATGGCTAAAGATTTTGCTTATGATTTACCTATCCCTCAAGGCTATATTGAAAGTGAAGAAAGTTTTATGG CTTTTGAAATTTTAGGAAGTTTAAACAAAGTTTTAAATGAAGAAATTTTTAAAATTTCTAAAGATTATGAGGGAGTAAGC AGGCTTATTGATGATAAACAAGCTCAGATTAAGAAAATCAATGAAAGTCTTAAGGATTACAACGCTCAATTAGCCAAGCT TCAAAGTTTAAAACAAAAACAAATTAGCGAAATTAATAAACAAAAAACAGATCGAACCATATATGCAAAAAAACTCGATG ACTTACAAGCTCAGCAAGAAGAGCTTAGAAAAACATTAAATCAATTAAAAATTATTAATAATAAAGAAGGTGCAAATTTA AACAAAAATGATACTAAAATAGTAAAAAATAATCAACAAATAAGGCAATTAGGTTCAAGCTATCAAGGAAGTTCAGTCAA GCGTTACACAGGAAAAAAAACCATAGCTCCATTGGATTCTTTTACTGTGAAGCAAAAATTTGGAAATTATGTTGATCCTG TTTACAATCTTAAAATTTTTAACGAGAATGTAGTTTTAAGAAGTAATAAAAGCGATGCAGTTGTTAAAAATGTGCTAGAT GGAAAAATAGTTTTTGCTAAAGATACTAGTATGTTAGCTCGAGTTGTTATTGTTGAACATGATAATGGCATACATACAAT ATACGCACATTTAGATAAGATTGCTCCTAATATTAAAGTTGGTAAGAATATTAAAAAAGGTGCCGTAGTGGGTAGAATAA AAAATGATCTTACTTTTGAAGTAACTCAAAAAAATTTTCATATCAATCCTTTGGAACTCATTAGCTTAAATTAG
Upstream 100 bases:
>100_bases TTCCACCTATTAATTTTATTTTACATTTGACTTTAATTTTTTTAGCTACTTTGTTTATTTGCTTGTTGTGTGTAAATACG GTTATGTTTAAGGTTAAAAG
Downstream 100 bases:
>100_bases CTAAATTTAATGGAATTTAAAATATAATTTCAAGTTAAATAAGGAGAAATAATGCAAGAGAGAAAAAGAGTTTTAGTAAA ATTTTCAGGAGAGGCTTTAG
Product: M24/M37 family peptidase
Products: NA
Alternate protein names: Peptidase M; Peptidase; Metallopeptidase; M23 Peptidase Domain Protein; Transaldolase
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MRKNILIFFCFFLFVDISLANAINEKTKSLEENKRIQEQLNKKLEDLASDILNGEKSLKDLSLQIESLNSQTSKLEASAK AQNQELNTLTSQNEDLLKSKSNMEGKLISLMAKDFAYDLPIPQGYIESEESFMAFEILGSLNKVLNEEIFKISKDYEGVS RLIDDKQAQIKKINESLKDYNAQLAKLQSLKQKQISEINKQKTDRTIYAKKLDDLQAQQEELRKTLNQLKIINNKEGANL NKNDTKIVKNNQQIRQLGSSYQGSSVKRYTGKKTIAPLDSFTVKQKFGNYVDPVYNLKIFNENVVLRSNKSDAVVKNVLD GKIVFAKDTSMLARVVIVEHDNGIHTIYAHLDKIAPNIKVGKNIKKGAVVGRIKNDLTFEVTQKNFHINPLELISLN
Sequences:
>Translated_397_residues MRKNILIFFCFFLFVDISLANAINEKTKSLEENKRIQEQLNKKLEDLASDILNGEKSLKDLSLQIESLNSQTSKLEASAK AQNQELNTLTSQNEDLLKSKSNMEGKLISLMAKDFAYDLPIPQGYIESEESFMAFEILGSLNKVLNEEIFKISKDYEGVS RLIDDKQAQIKKINESLKDYNAQLAKLQSLKQKQISEINKQKTDRTIYAKKLDDLQAQQEELRKTLNQLKIINNKEGANL NKNDTKIVKNNQQIRQLGSSYQGSSVKRYTGKKTIAPLDSFTVKQKFGNYVDPVYNLKIFNENVVLRSNKSDAVVKNVLD GKIVFAKDTSMLARVVIVEHDNGIHTIYAHLDKIAPNIKVGKNIKKGAVVGRIKNDLTFEVTQKNFHINPLELISLN >Mature_397_residues MRKNILIFFCFFLFVDISLANAINEKTKSLEENKRIQEQLNKKLEDLASDILNGEKSLKDLSLQIESLNSQTSKLEASAK AQNQELNTLTSQNEDLLKSKSNMEGKLISLMAKDFAYDLPIPQGYIESEESFMAFEILGSLNKVLNEEIFKISKDYEGVS RLIDDKQAQIKKINESLKDYNAQLAKLQSLKQKQISEINKQKTDRTIYAKKLDDLQAQQEELRKTLNQLKIINNKEGANL NKNDTKIVKNNQQIRQLGSSYQGSSVKRYTGKKTIAPLDSFTVKQKFGNYVDPVYNLKIFNENVVLRSNKSDAVVKNVLD GKIVFAKDTSMLARVVIVEHDNGIHTIYAHLDKIAPNIKVGKNIKKGAVVGRIKNDLTFEVTQKNFHINPLELISLN
Specific function: Unknown
COG id: COG0739
COG function: function code M; Membrane proteins related to metalloendopeptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45088; Mature: 45088
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKNILIFFCFFLFVDISLANAINEKTKSLEENKRIQEQLNKKLEDLASDILNGEKSLKD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH LSLQIESLNSQTSKLEASAKAQNQELNTLTSQNEDLLKSKSNMEGKLISLMAKDFAYDLP HHHHHHHHCCHHHHHHHHHHHCCHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHCCCC IPQGYIESEESFMAFEILGSLNKVLNEEIFKISKDYEGVSRLIDDKQAQIKKINESLKDY CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH NAQLAKLQSLKQKQISEINKQKTDRTIYAKKLDDLQAQQEELRKTLNQLKIINNKEGANL HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCC NKNDTKIVKNNQQIRQLGSSYQGSSVKRYTGKKTIAPLDSFTVKQKFGNYVDPVYNLKIF CCCCCHHHCCCHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEE NENVVLRSNKSDAVVKNVLDGKIVFAKDTSMLARVVIVEHDNGIHTIYAHLDKIAPNIKV CCCEEEECCCCHHHHHHHCCCEEEEEECHHHEEEEEEEECCCCHHHHHHHHHHHCCCCCC GKNIKKGAVVGRIKNDLTFEVTQKNFHINPLELISLN CCCCCCCHHHEECCCCCEEEEECCCCCCCCEEEEECC >Mature Secondary Structure MRKNILIFFCFFLFVDISLANAINEKTKSLEENKRIQEQLNKKLEDLASDILNGEKSLKD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH LSLQIESLNSQTSKLEASAKAQNQELNTLTSQNEDLLKSKSNMEGKLISLMAKDFAYDLP HHHHHHHHCCHHHHHHHHHHHCCHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHCCCC IPQGYIESEESFMAFEILGSLNKVLNEEIFKISKDYEGVSRLIDDKQAQIKKINESLKDY CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH NAQLAKLQSLKQKQISEINKQKTDRTIYAKKLDDLQAQQEELRKTLNQLKIINNKEGANL HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCC NKNDTKIVKNNQQIRQLGSSYQGSSVKRYTGKKTIAPLDSFTVKQKFGNYVDPVYNLKIF CCCCCHHHCCCHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEE NENVVLRSNKSDAVVKNVLDGKIVFAKDTSMLARVVIVEHDNGIHTIYAHLDKIAPNIKV CCCEEEECCCCHHHHHHHCCCEEEEEECHHHEEEEEEEECCCCHHHHHHHHHHHCCCCCC GKNIKKGAVVGRIKNDLTFEVTQKNFHINPLELISLN CCCCCCCHHHEECCCCCEEEEECCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA