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The map label for this gene is aer [H]

Identifier: 57238063

GI number: 57238063

Start: 1239984

End: 1240478

Strand: Reverse

Name: aer [H]

Synonym: CJE1325

Alternate gene names: 57238063

Gene position: 1240478-1239984 (Counterclockwise)

Preceding gene: 57238065

Following gene: 57238062

Centisome position: 69.77

GC content: 27.27

Gene sequence:

>495_bases
ATGGAAGAAATAGTTTTGTCTGAAAATGCTTTAATTACTTCTAAAACAGATCTTAAGGGGAATATCATTTATGCCAATAA
TGACTTTTTAAAATACGCAGGTTATAAAGTCGATGAGCTTTTATATAAATCTCATAATATAGTAAGACATGAAGATATGC
CACGCACTGTATTTAAATGTCTTTGGGATTATATTCAAAAAGGAGATGAAATTTTTGCATTTGTGAAAAATAAATCCAAA
GATGGTAATTTTTACTGGGTTTTTGCAAATGTAAGTGCTTCATTTGATGCTAATGGAGATATCATCAATTATTATTCTGT
TCGTCGTGCACCCAATAGAAAATCTCTTTCTATAATTGAAGAAGTTTATAAAATTTTACTTGAAAAAGAGCAAAAATCAG
GCATTAATGCTGGAGTTTCAGCTTTAATGGATATTGTAAATTCTTATAAAATGACTTATAATGAACTTATTTTTAACTTA
CAAGAAAATAACTAA

Upstream 100 bases:

>100_bases
TGAAAATTTTATAATTTTGTAATTCAGTTTGCTTTTTGTTATTTATTATTGGTAATAATTCTATTTTTGATTTATTTGTT
TTATTGGGATGTTTTAAATT

Downstream 100 bases:

>100_bases
ATAAGATATATTTAATCTTTTTTATTGTATAATTTTCGCCTAAAAATTAAAGTAATATATTATTAAAGTATTGCTTTAAT
TTATGACTTCAAAAATTTTT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MEEIVLSENALITSKTDLKGNIIYANNDFLKYAGYKVDELLYKSHNIVRHEDMPRTVFKCLWDYIQKGDEIFAFVKNKSK
DGNFYWVFANVSASFDANGDIINYYSVRRAPNRKSLSIIEEVYKILLEKEQKSGINAGVSALMDIVNSYKMTYNELIFNL
QENN

Sequences:

>Translated_164_residues
MEEIVLSENALITSKTDLKGNIIYANNDFLKYAGYKVDELLYKSHNIVRHEDMPRTVFKCLWDYIQKGDEIFAFVKNKSK
DGNFYWVFANVSASFDANGDIINYYSVRRAPNRKSLSIIEEVYKILLEKEQKSGINAGVSALMDIVNSYKMTYNELIFNL
QENN
>Mature_164_residues
MEEIVLSENALITSKTDLKGNIIYANNDFLKYAGYKVDELLYKSHNIVRHEDMPRTVFKCLWDYIQKGDEIFAFVKNKSK
DGNFYWVFANVSASFDANGDIINYYSVRRAPNRKSLSIIEEVYKILLEKEQKSGINAGVSALMDIVNSYKMTYNELIFNL
QENN

Specific function: Signal transducer for aerotaxis. The aerotactic response is the accumulation of cells around air bubbles. The nature of the sensory stimulus detected by this protein is the proton motive force or cellular redox state. It uses a FAD prosthetic group as a r

COG id: COG2202

COG function: function code T; FOG: PAS/PAC domain

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1789453, Length=134, Percent_Identity=34.3283582089552, Blast_Score=93, Evalue=7e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR013655 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF08447 PAS_3 [H]

EC number: NA

Molecular weight: Translated: 19006; Mature: 19006

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: PS50112 PAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEIVLSENALITSKTDLKGNIIYANNDFLKYAGYKVDELLYKSHNIVRHEDMPRTVFKC
CCCEEECCCEEEEECCCCCCCEEEECCCEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHH
LWDYIQKGDEIFAFVKNKSKDGNFYWVFANVSASFDANGDIINYYSVRRAPNRKSLSIIE
HHHHHHCCCEEEEEEECCCCCCCEEEEEEECEECCCCCCCEEEEEEECCCCCCCHHHHHH
EVYKILLEKEQKSGINAGVSALMDIVNSYKMTYNELIFNLQENN
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCC
>Mature Secondary Structure
MEEIVLSENALITSKTDLKGNIIYANNDFLKYAGYKVDELLYKSHNIVRHEDMPRTVFKC
CCCEEECCCEEEEECCCCCCCEEEECCCEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHH
LWDYIQKGDEIFAFVKNKSKDGNFYWVFANVSASFDANGDIINYYSVRRAPNRKSLSIIE
HHHHHHCCCEEEEEEECCCCCCCEEEEEEECEECCCCCCCEEEEEEECCCCCCCHHHHHH
EVYKILLEKEQKSGINAGVSALMDIVNSYKMTYNELIFNLQENN
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 9190831; 9380671 [H]