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The map label for this gene is tsf [H]

Identifier: 57238053

GI number: 57238053

Start: 1228501

End: 1229574

Strand: Reverse

Name: tsf [H]

Synonym: CJE1315

Alternate gene names: 57238053

Gene position: 1229574-1228501 (Counterclockwise)

Preceding gene: 57238054

Following gene: 57238052

Centisome position: 69.16

GC content: 34.17

Gene sequence:

>1074_bases
ATGGCTGAAATTACTGCTGCAATGGTAAAAGAACTCCGCGAAAGTACAGGCGCGGGGATGATGGATTGTAAAAATGCTTT
GAGTGAAACTAATGGAGATTTTGATAAAGCAGTACAACTTTTAAGAGAAAAAGGTTTAGGTAAGGCTGCTAAAAAAGCAG
ATAGACTTGCTGCAGAAGGTTTAGTAAGTGTAAAAGTAAGTGATGATTTTACAAGCGCAACTGTAAGTGAGATTAATTCC
GAAACAGATTTTGTGGCAAAAAATGATCAGTTTATCGCTTTAACAAAAGATACTACAGCTCATATTCAAAGCAATAGCTT
GCAAAGTGTGGAAGAGCTTCACTCAAGTACGATTAATGGTGTAAAGTTTGAAGAATATTTAAAAAGTCAAATTGCAACTA
TAGGAGAAAACCTAGTTGTAAGAAGATTTGCAACTTTAAAAGCAGGTGCTAACGGCGTTGTAAATGGTTATATCCATACA
AATGGCCGTGTGGGCGTTGTGATCGCTGCAGCTTGTGATAGCACTGAAGTGGCTTCAAAATCAAGAGATTTGTTAAGACA
AATTTGTATGCATATTGCAGCAATGAGACCAAGTTATTTAAGTTATGAAGATTTGGATATGACTTTTGTTGAAAATGAAT
ACAAAGCTTTGGTTGCTGAACTTGAAAAAGAAAATGAAGAAAGACGCAGACTGAAAGATCCAAATAAACCTGAACATAAA
ATTCCTCAATTTGCAAGTCGCAAACAATTAAGCGATGCAATTTTAAAAGAAGCTGAAGAAAAAATCAAAGAAGAACTTAA
AGCTCAAGGTAAACCTGAAAAAATTTGGGATAATATCATTCCAGGTAAAATGAATAGCTTTATAGCCGATAATTCTCAAC
TCGATAGCAAACTTACTTTAATGGGTCAGTTTTATGTACTGGATGACAAAAAAACTGTAGAACAAGTAATTGCCGAAAAA
GAAAAAGAATTTGGTGGAAAAATTAAAATTGTAGAATTTATTTGCTTTGAAGTTGGTGAAGGTTTAGAAAAGAAAACTGA
AGATTTTGCGGCTGAAGTTGCTGCACAACTTTAA

Upstream 100 bases:

>100_bases
AAGCTTTAGCAAATGAAGAAAAAGAAATCACCGATGAAGAGAAAAAAGAAGTTTTAGATGAAGCGATGAGCGAAGAAGAC
TTCGGTGAGGAGCAAGAATA

Downstream 100 bases:

>100_bases
AAACGGTTAAAAATGGAACTCTTAAGAGCGGAAAATTTAAGCCATAGTTTTGATTATCCGCTTTTTGAGGGTTTAAATCT
TACTTTAAATACTAAAGATT

Product: elongation factor Ts

Products: NA

Alternate protein names: EF-Ts [H]

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MAEITAAMVKELRESTGAGMMDCKNALSETNGDFDKAVQLLREKGLGKAAKKADRLAAEGLVSVKVSDDFTSATVSEINS
ETDFVAKNDQFIALTKDTTAHIQSNSLQSVEELHSSTINGVKFEEYLKSQIATIGENLVVRRFATLKAGANGVVNGYIHT
NGRVGVVIAAACDSTEVASKSRDLLRQICMHIAAMRPSYLSYEDLDMTFVENEYKALVAELEKENEERRRLKDPNKPEHK
IPQFASRKQLSDAILKEAEEKIKEELKAQGKPEKIWDNIIPGKMNSFIADNSQLDSKLTLMGQFYVLDDKKTVEQVIAEK
EKEFGGKIKIVEFICFEVGEGLEKKTEDFAAEVAAQL

Sequences:

>Translated_357_residues
MAEITAAMVKELRESTGAGMMDCKNALSETNGDFDKAVQLLREKGLGKAAKKADRLAAEGLVSVKVSDDFTSATVSEINS
ETDFVAKNDQFIALTKDTTAHIQSNSLQSVEELHSSTINGVKFEEYLKSQIATIGENLVVRRFATLKAGANGVVNGYIHT
NGRVGVVIAAACDSTEVASKSRDLLRQICMHIAAMRPSYLSYEDLDMTFVENEYKALVAELEKENEERRRLKDPNKPEHK
IPQFASRKQLSDAILKEAEEKIKEELKAQGKPEKIWDNIIPGKMNSFIADNSQLDSKLTLMGQFYVLDDKKTVEQVIAEK
EKEFGGKIKIVEFICFEVGEGLEKKTEDFAAEVAAQL
>Mature_356_residues
AEITAAMVKELRESTGAGMMDCKNALSETNGDFDKAVQLLREKGLGKAAKKADRLAAEGLVSVKVSDDFTSATVSEINSE
TDFVAKNDQFIALTKDTTAHIQSNSLQSVEELHSSTINGVKFEEYLKSQIATIGENLVVRRFATLKAGANGVVNGYIHTN
GRVGVVIAAACDSTEVASKSRDLLRQICMHIAAMRPSYLSYEDLDMTFVENEYKALVAELEKENEERRRLKDPNKPEHKI
PQFASRKQLSDAILKEAEEKIKEELKAQGKPEKIWDNIIPGKMNSFIADNSQLDSKLTLMGQFYVLDDKKTVEQVIAEKE
KEFGGKIKIVEFICFEVGEGLEKKTEDFAAEVAAQL

Specific function: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome [H]

COG id: COG0264

COG function: function code J; Translation elongation factor Ts

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-Ts family [H]

Homologues:

Organism=Homo sapiens, GI171846268, Length=230, Percent_Identity=30, Blast_Score=81, Evalue=2e-15,
Organism=Escherichia coli, GI1786366, Length=355, Percent_Identity=35.2112676056338, Blast_Score=183, Evalue=2e-47,
Organism=Caenorhabditis elegans, GI17561440, Length=214, Percent_Identity=33.1775700934579, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI19921466, Length=229, Percent_Identity=28.82096069869, Blast_Score=74, Evalue=1e-13,

Paralogues:

None

Copy number: 2670 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1100 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 4173 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 14563 Molecules/Cell In: Growth Phase, Gluco

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001816
- InterPro:   IPR014039
- InterPro:   IPR018101
- InterPro:   IPR009060
- InterPro:   IPR000449 [H]

Pfam domain/function: PF00889 EF_TS; PF00627 UBA [H]

EC number: NA

Molecular weight: Translated: 39537; Mature: 39406

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: PS01126 EF_TS_1 ; PS01127 EF_TS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEITAAMVKELRESTGAGMMDCKNALSETNGDFDKAVQLLREKGLGKAAKKADRLAAEG
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCC
LVSVKVSDDFTSATVSEINSETDFVAKNDQFIALTKDTTAHIQSNSLQSVEELHSSTING
EEEEEECCCHHHHHHHHHCCCCCEEECCCCEEEEECCCHHHHCCCHHHHHHHHHHHHCCC
VKFEEYLKSQIATIGENLVVRRFATLKAGANGVVNGYIHTNGRVGVVIAAACDSTEVASK
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEEEECCCHHHHHH
SRDLLRQICMHIAAMRPSYLSYEDLDMTFVENEYKALVAELEKENEERRRLKDPNKPEHK
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHH
IPQFASRKQLSDAILKEAEEKIKEELKAQGKPEKIWDNIIPGKMNSFIADNSQLDSKLTL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHCCCCHHCCCEEE
MGQFYVLDDKKTVEQVIAEKEKEFGGKIKIVEFICFEVGEGLEKKTEDFAAEVAAQL
EEEEEEECCHHHHHHHHHHHHHHHCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AEITAAMVKELRESTGAGMMDCKNALSETNGDFDKAVQLLREKGLGKAAKKADRLAAEG
CHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCC
LVSVKVSDDFTSATVSEINSETDFVAKNDQFIALTKDTTAHIQSNSLQSVEELHSSTING
EEEEEECCCHHHHHHHHHCCCCCEEECCCCEEEEECCCHHHHCCCHHHHHHHHHHHHCCC
VKFEEYLKSQIATIGENLVVRRFATLKAGANGVVNGYIHTNGRVGVVIAAACDSTEVASK
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEEEECCCHHHHHH
SRDLLRQICMHIAAMRPSYLSYEDLDMTFVENEYKALVAELEKENEERRRLKDPNKPEHK
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHH
IPQFASRKQLSDAILKEAEEKIKEELKAQGKPEKIWDNIIPGKMNSFIADNSQLDSKLTL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHCCCCHHCCCEEE
MGQFYVLDDKKTVEQVIAEKEKEFGGKIKIVEFICFEVGEGLEKKTEDFAAEVAAQL
EEEEEEECCHHHHHHHHHHHHHHHCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA