| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
Click here to switch to the map view.
The map label for this gene is 57238042
Identifier: 57238042
GI number: 57238042
Start: 1219369
End: 1220799
Strand: Reverse
Name: 57238042
Synonym: CJE1304
Alternate gene names: NA
Gene position: 1220799-1219369 (Counterclockwise)
Preceding gene: 57238043
Following gene: 57238041
Centisome position: 68.67
GC content: 35.71
Gene sequence:
>1431_bases ATGAAAACTAAGTTTTCACTTATTTTAAGTGCTTGTCTTCTTTCATCTTCACTTTTTGCTAAAAATACAGATGATGAGAT AACCAAGCTTCAAAAACAGCTTGCACAAATTCAAGCTGAGCTTGCACAAATCAGAAAAGAAAGGGAAGTTCAAGCTAAGC AAAATGAAGCTGTAAAAGCTGAACTTGCTGATCTTAATGATAGAGCCGATGAAACAGAATTCCAAGCTGCTTTGAGCAAG GTTAAATTTGGACTTGAGTTTTCAACAGCAGTTTCAAATACAAACTATAAAGTTAGCGGACAAGATTATAGTGCTAATAA CAAATGGATGAATGAGCTTCATTTAAATATGAATGCTGATATTAATGATAAAACCAAATTCTATGGTCGTTTATCTATGG CTAAAAATTGGTCTCAAATGGGTTGGAGTGGTACTCCTTATGACTTAGATGCAGGAAGAAACACAAGATCAAGCGGGCCT GTACTTTATGTAGATAGAGCTTATCTTGACTACTACATCACACCTGAATGGATTGCGACTGTAGGAAGACAACCAGGAAC CGATGGCCCAGGAAGTAATCTTAGAAACAATGCTTTAAGACAATCAACTTATCCAGCCTTAGCGATTAATGCTCTAGGTG ATGCAGCAGTGATCACTTATAAACCTGAAAGTTTGCAAGATCATAAAGTAGCTATCCGTGCAGCTTATGGTAAAACTTAT CAATGGGATGAAGAAGGCAAGGTAAGAGACTGGATGAGCGATCAAAAAGATGCTGATGCAAATCTTTACTATGCTGCAGT AGAAGGAGAGCTTCCTATAGAAGGCATGGGAGATAATCTTATTATCTTCAATGTGGCTCATATGACTGATTTTGCATTAC CACTTCCAGGAATCAATCTTCCAATTGGCCCAAGCGGTGCTTTGGTTAATGTTTTACAAGATGGTGTTTACAATCTAGGA AATTTAACTTTAGCAAATATTCATTTTGAAAATTACAATGCTTTTGGTACAAATTTTAATTATTTTGTATCTTTAGGGTA TTCTAACGGAACAAATGCACATACTCTAAGTGCAATTCCTGCTGTGCAATCTCAATTGGAATTTAATGAAAAAGATGGCT ATGCTGTGCATGTAGGTGGACGCTATGATTTTACCAAGACTTTAAAAGTAGGGTATGAGTTCTTCTGGGGAAGTAGATAC TGGTATACTATGAGCCGTCCAAGTATCAACGATCCGCTTAATATAAGAATGACAAGAGGAACAGCACATGATTTTTATGT GATTTATCAACTTGATAGATATCAATTCTTACGCTTAAGTTATACTAATATCCAAAATATTTGGGGTAATCGTGGCTTAC CATTTGGTGGAGCGAAAAAAGATAAAGCAAGAGCTGATAATATCATGTTAATGTATAATGTAAAATTCTAA
Upstream 100 bases:
>100_bases TAGCTAAAAATGATTAATGTATAATTTTTTTTTAAACTTTTTTTTCTATAATCACAATTTTAATTTGCTAAATGTAACAA AATTACAAGGAGTTATGATT
Downstream 100 bases:
>100_bases GGAGCAAAAGATGAGAAAAATACTTTTTGCAAGTTTATTACCTATCATTGCTTTGGCTGATTGTGCAAGTTTGATGGCAA AATACGAAGCTCCAGAGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 476; Mature: 476
Protein sequence:
>476_residues MKTKFSLILSACLLSSSLFAKNTDDEITKLQKQLAQIQAELAQIRKEREVQAKQNEAVKAELADLNDRADETEFQAALSK VKFGLEFSTAVSNTNYKVSGQDYSANNKWMNELHLNMNADINDKTKFYGRLSMAKNWSQMGWSGTPYDLDAGRNTRSSGP VLYVDRAYLDYYITPEWIATVGRQPGTDGPGSNLRNNALRQSTYPALAINALGDAAVITYKPESLQDHKVAIRAAYGKTY QWDEEGKVRDWMSDQKDADANLYYAAVEGELPIEGMGDNLIIFNVAHMTDFALPLPGINLPIGPSGALVNVLQDGVYNLG NLTLANIHFENYNAFGTNFNYFVSLGYSNGTNAHTLSAIPAVQSQLEFNEKDGYAVHVGGRYDFTKTLKVGYEFFWGSRY WYTMSRPSINDPLNIRMTRGTAHDFYVIYQLDRYQFLRLSYTNIQNIWGNRGLPFGGAKKDKARADNIMLMYNVKF
Sequences:
>Translated_476_residues MKTKFSLILSACLLSSSLFAKNTDDEITKLQKQLAQIQAELAQIRKEREVQAKQNEAVKAELADLNDRADETEFQAALSK VKFGLEFSTAVSNTNYKVSGQDYSANNKWMNELHLNMNADINDKTKFYGRLSMAKNWSQMGWSGTPYDLDAGRNTRSSGP VLYVDRAYLDYYITPEWIATVGRQPGTDGPGSNLRNNALRQSTYPALAINALGDAAVITYKPESLQDHKVAIRAAYGKTY QWDEEGKVRDWMSDQKDADANLYYAAVEGELPIEGMGDNLIIFNVAHMTDFALPLPGINLPIGPSGALVNVLQDGVYNLG NLTLANIHFENYNAFGTNFNYFVSLGYSNGTNAHTLSAIPAVQSQLEFNEKDGYAVHVGGRYDFTKTLKVGYEFFWGSRY WYTMSRPSINDPLNIRMTRGTAHDFYVIYQLDRYQFLRLSYTNIQNIWGNRGLPFGGAKKDKARADNIMLMYNVKF >Mature_476_residues MKTKFSLILSACLLSSSLFAKNTDDEITKLQKQLAQIQAELAQIRKEREVQAKQNEAVKAELADLNDRADETEFQAALSK VKFGLEFSTAVSNTNYKVSGQDYSANNKWMNELHLNMNADINDKTKFYGRLSMAKNWSQMGWSGTPYDLDAGRNTRSSGP VLYVDRAYLDYYITPEWIATVGRQPGTDGPGSNLRNNALRQSTYPALAINALGDAAVITYKPESLQDHKVAIRAAYGKTY QWDEEGKVRDWMSDQKDADANLYYAAVEGELPIEGMGDNLIIFNVAHMTDFALPLPGINLPIGPSGALVNVLQDGVYNLG NLTLANIHFENYNAFGTNFNYFVSLGYSNGTNAHTLSAIPAVQSQLEFNEKDGYAVHVGGRYDFTKTLKVGYEFFWGSRY WYTMSRPSINDPLNIRMTRGTAHDFYVIYQLDRYQFLRLSYTNIQNIWGNRGLPFGGAKKDKARADNIMLMYNVKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53568; Mature: 53568
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTKFSLILSACLLSSSLFAKNTDDEITKLQKQLAQIQAELAQIRKEREVQAKQNEAVKA CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH ELADLNDRADETEFQAALSKVKFGLEFSTAVSNTNYKVSGQDYSANNKWMNELHLNMNAD HHHCCCCCCCHHHHHHHHHHHHCCEEEEHEECCCCEEECCCCCCCCCCEEEEEEEECCCC INDKTKFYGRLSMAKNWSQMGWSGTPYDLDAGRNTRSSGPVLYVDRAYLDYYITPEWIAT CCCCHHHEEEHHHHCCHHHCCCCCCCEECCCCCCCCCCCCEEEEEEEEEEEEECHHHHHH VGRQPGTDGPGSNLRNNALRQSTYPALAINALGDAAVITYKPESLQDHKVAIRAAYGKTY HCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCCCEEEEEEECCCCE QWDEEGKVRDWMSDQKDADANLYYAAVEGELPIEGMGDNLIIFNVAHMTDFALPLPGINL EECCCCCHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEHHHHHHCCCCCCCCC PIGPSGALVNVLQDGVYNLGNLTLANIHFENYNAFGTNFNYFVSLGYSNGTNAHTLSAIP CCCCCHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCEEEHHHH AVQSQLEFNEKDGYAVHVGGRYDFTKTLKVGYEFFWGSRYWYTMSRPSINDPLNIRMTRG HHHHHHCCCCCCCEEEEECCCCCCHHHHEECEEEEECCEEEEEECCCCCCCCEEEEEECC TAHDFYVIYQLDRYQFLRLSYTNIQNIWGNRGLPFGGAKKDKARADNIMLMYNVKF CCCEEEEEEEECCEEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECC >Mature Secondary Structure MKTKFSLILSACLLSSSLFAKNTDDEITKLQKQLAQIQAELAQIRKEREVQAKQNEAVKA CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH ELADLNDRADETEFQAALSKVKFGLEFSTAVSNTNYKVSGQDYSANNKWMNELHLNMNAD HHHCCCCCCCHHHHHHHHHHHHCCEEEEHEECCCCEEECCCCCCCCCCEEEEEEEECCCC INDKTKFYGRLSMAKNWSQMGWSGTPYDLDAGRNTRSSGPVLYVDRAYLDYYITPEWIAT CCCCHHHEEEHHHHCCHHHCCCCCCCEECCCCCCCCCCCCEEEEEEEEEEEEECHHHHHH VGRQPGTDGPGSNLRNNALRQSTYPALAINALGDAAVITYKPESLQDHKVAIRAAYGKTY HCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCCCEEEEEEECCCCE QWDEEGKVRDWMSDQKDADANLYYAAVEGELPIEGMGDNLIIFNVAHMTDFALPLPGINL EECCCCCHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEHHHHHHCCCCCCCCC PIGPSGALVNVLQDGVYNLGNLTLANIHFENYNAFGTNFNYFVSLGYSNGTNAHTLSAIP CCCCCHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCEEEHHHH AVQSQLEFNEKDGYAVHVGGRYDFTKTLKVGYEFFWGSRYWYTMSRPSINDPLNIRMTRG HHHHHHCCCCCCCEEEEECCCCCCHHHHEECEEEEECCEEEEEECCCCCCCCEEEEEECC TAHDFYVIYQLDRYQFLRLSYTNIQNIWGNRGLPFGGAKKDKARADNIMLMYNVKF CCCEEEEEEEECCEEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA