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The map label for this gene is ychE [C]

Identifier: 57237993

GI number: 57237993

Start: 1170941

End: 1171567

Strand: Reverse

Name: ychE [C]

Synonym: CJE1254

Alternate gene names: 57237993

Gene position: 1171567-1170941 (Counterclockwise)

Preceding gene: 57237994

Following gene: 57237992

Centisome position: 65.9

GC content: 29.51

Gene sequence:

>627_bases
ATGGGTTCTGAGCTTTATTTGATGTTTTTTGCTGCAATTACTTTACTTGCTATATTAAATCCTTTTGGTAATTTAACTCA
ATTTTTGGCTATGAGTGATGGATTGCCTTTAATGCTTCGAAAAAAACTTTTTAGAACTATTCTCTATACAGCTTTTACTA
TAGTTTTGGTGTTTTTATTATCAGGACCTTTATTTATGAACTATATTTTTAGAGTTTCATTGGATGATTTAAGGGTTTCT
GGTGGTTTGGTTCTTATTATAATGGCTATTAAAAATTTACTTTTTTCAACAAAAATTGCAACTAAGGATTTTAGTTCTTA
TCAAGATATGGATGATAAGGAAATTTTAAGACAGAGTTTAATACCTATGGCATTTCCTATGCTTGTTGGGCCTGGAACTT
TAGCTAGCGTTATTGTTATAGCCGAAGATGGTGGGCTTGATGTTGCTCTTGGCGGAGTAATGATAGCTTTTATTTTTATG
TTTATACTTTTTCATTTTGCAGCTACTATAGAAAAAATAGTTGGAAAATTGATTTTACATGTTTTTTCTCGTATAGCACA
AGTATTTATTGTTGCTATGGGGTTTAAGATGATTATTGTAGGTTTAAAGGATATATTTAACTTATAA

Upstream 100 bases:

>100_bases
TTTTTGAAGGAGAAGGATTTTCTGCTAAAAATGTAAGACATTGTGTAAATTCTATTTCTTTGGAATTTGTAAAAACTAAG
GATTGATAGTGTTTTCTAGT

Downstream 100 bases:

>100_bases
ATTAATATAATTTTAAGTAAATAATACTATATAAATATGATATAATTTTAAAATAATTTATTATTAAAAAGGTGAGTTTT
ATGTTTGGTGCTAAGAAAAA

Product: MarC family integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MGSELYLMFFAAITLLAILNPFGNLTQFLAMSDGLPLMLRKKLFRTILYTAFTIVLVFLLSGPLFMNYIFRVSLDDLRVS
GGLVLIIMAIKNLLFSTKIATKDFSSYQDMDDKEILRQSLIPMAFPMLVGPGTLASVIVIAEDGGLDVALGGVMIAFIFM
FILFHFAATIEKIVGKLILHVFSRIAQVFIVAMGFKMIIVGLKDIFNL

Sequences:

>Translated_208_residues
MGSELYLMFFAAITLLAILNPFGNLTQFLAMSDGLPLMLRKKLFRTILYTAFTIVLVFLLSGPLFMNYIFRVSLDDLRVS
GGLVLIIMAIKNLLFSTKIATKDFSSYQDMDDKEILRQSLIPMAFPMLVGPGTLASVIVIAEDGGLDVALGGVMIAFIFM
FILFHFAATIEKIVGKLILHVFSRIAQVFIVAMGFKMIIVGLKDIFNL
>Mature_207_residues
GSELYLMFFAAITLLAILNPFGNLTQFLAMSDGLPLMLRKKLFRTILYTAFTIVLVFLLSGPLFMNYIFRVSLDDLRVSG
GLVLIIMAIKNLLFSTKIATKDFSSYQDMDDKEILRQSLIPMAFPMLVGPGTLASVIVIAEDGGLDVALGGVMIAFIFMF
ILFHFAATIEKIVGKLILHVFSRIAQVFIVAMGFKMIIVGLKDIFNL

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=208, Percent_Identity=26.4423076923077, Blast_Score=68, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 23092; Mature: 22960

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSELYLMFFAAITLLAILNPFGNLTQFLAMSDGLPLMLRKKLFRTILYTAFTIVLVFLL
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SGPLFMNYIFRVSLDDLRVSGGLVLIIMAIKNLLFSTKIATKDFSSYQDMDDKEILRQSL
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
IPMAFPMLVGPGTLASVIVIAEDGGLDVALGGVMIAFIFMFILFHFAATIEKIVGKLILH
HHHHHHHHCCCCHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFSRIAQVFIVAMGFKMIIVGLKDIFNL
HHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GSELYLMFFAAITLLAILNPFGNLTQFLAMSDGLPLMLRKKLFRTILYTAFTIVLVFLL
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SGPLFMNYIFRVSLDDLRVSGGLVLIIMAIKNLLFSTKIATKDFSSYQDMDDKEILRQSL
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
IPMAFPMLVGPGTLASVIVIAEDGGLDVALGGVMIAFIFMFILFHFAATIEKIVGKLILH
HHHHHHHHCCCCHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFSRIAQVFIVAMGFKMIIVGLKDIFNL
HHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12089438 [H]