| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is yaeL [C]
Identifier: 57237950
GI number: 57237950
Start: 1129453
End: 1130559
Strand: Direct
Name: yaeL [C]
Synonym: CJE1211
Alternate gene names: 57237950
Gene position: 1129453-1130559 (Clockwise)
Preceding gene: 57237949
Following gene: 57237951
Centisome position: 63.53
GC content: 29.72
Gene sequence:
>1107_bases ATGAGATCTTTATTATTTTTAATTGTTATTTTGATTTTGGGAATTAAATTTTATTCTATTGAATTTTTAGCAACTGTTTT AGTCATCTCATTTTTAATTTTCTTTCACGAATTAGGACATTTTTTGGCTGCAAGATCTTTGGGTGTAAAAGTTGAAGTTT TTAGTATAGGATTTGGAAAAAGTCTTATAGAGCGTGAATTTAAAGGCACAAACTATCGCTTAAGCACTTTACCACTTGGA GGATATGTTAAACTTAAAGGACAAGATGATATGCGTCCTGGTTTTGAAAATCTAGACAAAGATAGCTATAGCATTTTAAG TCCTTTAAAAAAGATTTATATTCTTTTTGCTGGACCATTTTTTAATCTAATTTTAGCTTTTTTTCTTTATATTATCATAG GAAATTTAGGTCTAAACAAACTTGCTCCGCAAATAGGAAACATAGCGTCAAACTCTGCTGCACAAGAAATAGGACTTCAA AAAAATGATACTATCTTAGAAATTAACGGTATAAGAATTCAAACCTTTGATGAAATTTCAAAGCATTTAAGTTTAGATCC TTTGAAAATATTAATCAATAGAGAAGGAAAAAATTTAGAATTTATTTTAACTCCAAAAATAGGACAAGGATACAATGACT TTGGACAAATCGTTGAAAAACCTCAACTTGGAGTCAGTCCAAATGGGACAAGCACTCTTGTAAAACACCAAGGTTTAGAA AGTTTTAAATATGCCGCACAAGAAAGTTTTCAAGCTTCTACACTCATCATCAAGGGTATTGTAAAACTCATAAGTGGTGA AGTTGAAGCAAAAAATTTAGGCGGTATTATCACCATGACTGAAATTACCTCAAAGGCTGCACAAAATAGCTTTACTTTGC TTTTATTTATCACTGCTTTAATTTCTATAAATTTAGGCATTTTAAATCTTTTACCTATTCCTATGCTTGATGGAGGACAT ATACTTTTTAATCTTTATGAAATGATTTTTAGACGCAAAGTTCCACAGCGTACTTTTGAATATTTAAGCTATACAGGCAT GGCAATACTTTTAAGTTTAATGCTCTTTGCAACTTATAATGATATATCAAGGATTATAGGTGAATAA
Upstream 100 bases:
>100_bases TAGGCGGTGAAATTCTACTTTACATAGCTTTGATTTTAACTCTTTATTCTGGATTTGAATACATCTATACTTATATAAAA GCTCAAAAAAAAGGAGAAAA
Downstream 100 bases:
>100_bases AAAATTTTCCTACCCTATTCCAAATTTTACTGATAGAAGAAAAAGTATAATCTTTTGGCGCTATTTGCGTTTTCAAGCAA GAAAAATTTTATATTTTCCT
Product: membrane-associated zinc metalloprotease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MRSLLFLIVILILGIKFYSIEFLATVLVISFLIFFHELGHFLAARSLGVKVEVFSIGFGKSLIEREFKGTNYRLSTLPLG GYVKLKGQDDMRPGFENLDKDSYSILSPLKKIYILFAGPFFNLILAFFLYIIIGNLGLNKLAPQIGNIASNSAAQEIGLQ KNDTILEINGIRIQTFDEISKHLSLDPLKILINREGKNLEFILTPKIGQGYNDFGQIVEKPQLGVSPNGTSTLVKHQGLE SFKYAAQESFQASTLIIKGIVKLISGEVEAKNLGGIITMTEITSKAAQNSFTLLLFITALISINLGILNLLPIPMLDGGH ILFNLYEMIFRRKVPQRTFEYLSYTGMAILLSLMLFATYNDISRIIGE
Sequences:
>Translated_368_residues MRSLLFLIVILILGIKFYSIEFLATVLVISFLIFFHELGHFLAARSLGVKVEVFSIGFGKSLIEREFKGTNYRLSTLPLG GYVKLKGQDDMRPGFENLDKDSYSILSPLKKIYILFAGPFFNLILAFFLYIIIGNLGLNKLAPQIGNIASNSAAQEIGLQ KNDTILEINGIRIQTFDEISKHLSLDPLKILINREGKNLEFILTPKIGQGYNDFGQIVEKPQLGVSPNGTSTLVKHQGLE SFKYAAQESFQASTLIIKGIVKLISGEVEAKNLGGIITMTEITSKAAQNSFTLLLFITALISINLGILNLLPIPMLDGGH ILFNLYEMIFRRKVPQRTFEYLSYTGMAILLSLMLFATYNDISRIIGE >Mature_368_residues MRSLLFLIVILILGIKFYSIEFLATVLVISFLIFFHELGHFLAARSLGVKVEVFSIGFGKSLIEREFKGTNYRLSTLPLG GYVKLKGQDDMRPGFENLDKDSYSILSPLKKIYILFAGPFFNLILAFFLYIIIGNLGLNKLAPQIGNIASNSAAQEIGLQ KNDTILEINGIRIQTFDEISKHLSLDPLKILINREGKNLEFILTPKIGQGYNDFGQIVEKPQLGVSPNGTSTLVKHQGLE SFKYAAQESFQASTLIIKGIVKLISGEVEAKNLGGIITMTEITSKAAQNSFTLLLFITALISINLGILNLLPIPMLDGGH ILFNLYEMIFRRKVPQRTFEYLSYTGMAILLSLMLFATYNDISRIIGE
Specific function: Unknown
COG id: COG0750
COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PDZ (DHR) domain [H]
Homologues:
Organism=Escherichia coli, GI1786373, Length=246, Percent_Identity=29.6747967479675, Blast_Score=103, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001478 - InterPro: IPR004387 - InterPro: IPR008915 [H]
Pfam domain/function: PF00595 PDZ; PF02163 Peptidase_M50 [H]
EC number: NA
Molecular weight: Translated: 40985; Mature: 40985
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSLLFLIVILILGIKFYSIEFLATVLVISFLIFFHELGHFLAARSLGVKVEVFSIGFGK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCH SLIEREFKGTNYRLSTLPLGGYVKLKGQDDMRPGFENLDKDSYSILSPLKKIYILFAGPF HHHHHHHCCCCEEEEEECCCCEEEECCCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCHH FNLILAFFLYIIIGNLGLNKLAPQIGNIASNSAAQEIGLQKNDTILEINGIRIQTFDEIS HHHHHHHHHHHHHHCCCHHHHHHHHCCHHCCCHHHHCCCCCCCCEEEECCEEEEEHHHHH KHLSLDPLKILINREGKNLEFILTPKIGQGYNDFGQIVEKPQLGVSPNGTSTLVKHQGLE HHCCCCCEEEEEECCCCCEEEEECCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHCCHH SFKYAAQESFQASTLIIKGIVKLISGEVEAKNLGGIITMTEITSKAAQNSFTLLLFITAL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHCCHHHHHHHHHH ISINLGILNLLPIPMLDGGHILFNLYEMIFRRKVPQRTFEYLSYTGMAILLSLMLFATYN HHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH DISRIIGE HHHHHHCC >Mature Secondary Structure MRSLLFLIVILILGIKFYSIEFLATVLVISFLIFFHELGHFLAARSLGVKVEVFSIGFGK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCH SLIEREFKGTNYRLSTLPLGGYVKLKGQDDMRPGFENLDKDSYSILSPLKKIYILFAGPF HHHHHHHCCCCEEEEEECCCCEEEECCCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCHH FNLILAFFLYIIIGNLGLNKLAPQIGNIASNSAAQEIGLQKNDTILEINGIRIQTFDEIS HHHHHHHHHHHHHHCCCHHHHHHHHCCHHCCCHHHHCCCCCCCCEEEECCEEEEEHHHHH KHLSLDPLKILINREGKNLEFILTPKIGQGYNDFGQIVEKPQLGVSPNGTSTLVKHQGLE HHCCCCCEEEEEECCCCCEEEEECCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHCCHH SFKYAAQESFQASTLIIKGIVKLISGEVEAKNLGGIITMTEITSKAAQNSFTLLLFITAL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHCCHHHHHHHHHH ISINLGILNLLPIPMLDGGHILFNLYEMIFRRKVPQRTFEYLSYTGMAILLSLMLFATYN HHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH DISRIIGE HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10688204 [H]