| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
Click here to switch to the map view.
The map label for this gene is 57237941
Identifier: 57237941
GI number: 57237941
Start: 1119253
End: 1120035
Strand: Reverse
Name: 57237941
Synonym: CJE1199
Alternate gene names: NA
Gene position: 1120035-1119253 (Counterclockwise)
Preceding gene: 57237942
Following gene: 57237940
Centisome position: 63.0
GC content: 28.61
Gene sequence:
>783_bases ATGAGTAAAATAGCAGCTTTACAGTTTCCAACTTTAGCTTTAAGTGAATCAAGGCTTGATTATTATCTTAAAGCTTCAAA AGACAATGGAGTAAATTTAGTAGTTTTGGGAGAATATGTGATCAACAGTTTTTTTACAGAACTTTTGCATATGCCAAAAA ATATGATAAAAGAACAAAGCGAAGCTAAAAAAGAAAGCTTGATTAAACTTGCTAAAAAATACGAATTAGAAATCATCGCT CCTTATGTAAGCGTTGAAGCTAAAAGTTATAAAAAACTTTGCTTAAAAGTTACTCCAAATGGTGTGAAAAGTTATGAACA GCAAATTTTAATGCCTTATGAACATTGGAATGAAGAAAAATTTTTCAGCAACAAAACTCCATCAGAATTAAAAATTTTTA CTTTTAATTATGAAAAATTAAAATGTGCTTTGCTTTTTGGTTTTGAGACACATTTTGATATTTTTTGGCAACAGATTATG GCGAAAAAAATTGATTTGGTTATCGTTCCTAGTGCTTGTACCTTTGAAAGCAAACAAAGATGGGAAGAACTTTTAAAAAC AAGAGCTTTTTTAAATTCTACAAGCATTTTAAGAGTAAATCGCATAGGCAAAACAAAAGATGAGTGGAATTTTTACGGCG ATACTTTGTTTATTAATGCTTTTGGTGAGATAGAAAGTAAATTGGGTTCTGAAGAAGAAATGCTTATTATAGAGCCTAAA AAAAGTGATGAAGCAAGAAAACTTTGGGGTTTTGATAAGATAATAAAAGAATTTAAAAATTAA
Upstream 100 bases:
>100_bases GCCTTAGATGAAAGTGTAAAAATTTATAAAGAAGGTTTAGAGAGTATCAAAAAAGCAAGACTTGAGCTTGAAAAAGCAAA ATTAGAAGTGGAGCAAATCG
Downstream 100 bases:
>100_bases ATTTATACTTATAGATTTATAAGTTTATAAAAGTTATCTAGAGCTGATAGAAGCTAAGGTTTATATTTTCTTTTTAGTAA AAAAGTGCTAAAATTTAGCC
Product: carbon-nitrogen family hydrolase
Products: NA
Alternate protein names: Carbon-Nitrogen Hydrolase; Hydrolase Carbon-Nitrogen Family
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MSKIAALQFPTLALSESRLDYYLKASKDNGVNLVVLGEYVINSFFTELLHMPKNMIKEQSEAKKESLIKLAKKYELEIIA PYVSVEAKSYKKLCLKVTPNGVKSYEQQILMPYEHWNEEKFFSNKTPSELKIFTFNYEKLKCALLFGFETHFDIFWQQIM AKKIDLVIVPSACTFESKQRWEELLKTRAFLNSTSILRVNRIGKTKDEWNFYGDTLFINAFGEIESKLGSEEEMLIIEPK KSDEARKLWGFDKIIKEFKN
Sequences:
>Translated_260_residues MSKIAALQFPTLALSESRLDYYLKASKDNGVNLVVLGEYVINSFFTELLHMPKNMIKEQSEAKKESLIKLAKKYELEIIA PYVSVEAKSYKKLCLKVTPNGVKSYEQQILMPYEHWNEEKFFSNKTPSELKIFTFNYEKLKCALLFGFETHFDIFWQQIM AKKIDLVIVPSACTFESKQRWEELLKTRAFLNSTSILRVNRIGKTKDEWNFYGDTLFINAFGEIESKLGSEEEMLIIEPK KSDEARKLWGFDKIIKEFKN >Mature_259_residues SKIAALQFPTLALSESRLDYYLKASKDNGVNLVVLGEYVINSFFTELLHMPKNMIKEQSEAKKESLIKLAKKYELEIIAP YVSVEAKSYKKLCLKVTPNGVKSYEQQILMPYEHWNEEKFFSNKTPSELKIFTFNYEKLKCALLFGFETHFDIFWQQIMA KKIDLVIVPSACTFESKQRWEELLKTRAFLNSTSILRVNRIGKTKDEWNFYGDTLFINAFGEIESKLGSEEEMLIIEPKK SDEARKLWGFDKIIKEFKN
Specific function: Unknown
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30396; Mature: 30264
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIAALQFPTLALSESRLDYYLKASKDNGVNLVVLGEYVINSFFTELLHMPKNMIKEQS CCCCEEEECCHHEECCCCCEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHH EAKKESLIKLAKKYELEIIAPYVSVEAKSYKKLCLKVTPNGVKSYEQQILMPYEHWNEEK HHHHHHHHHHHHHHCEEEEECCCCCCHHHHHEEEEEECCCHHHHHHHHEECCHHHCCCCH FFSNKTPSELKIFTFNYEKLKCALLFGFETHFDIFWQQIMAKKIDLVIVPSACTFESKQR HCCCCCCCCEEEEEEEHHHEEEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHH WEELLKTRAFLNSTSILRVNRIGKTKDEWNFYGDTLFINAFGEIESKLGSEEEMLIIEPK HHHHHHHHHHHCCCCEEEEECCCCCCCCCCEECCEEEEEEHHHHHHHCCCCCCEEEECCC KSDEARKLWGFDKIIKEFKN CCCHHHHHHCHHHHHHHHCC >Mature Secondary Structure SKIAALQFPTLALSESRLDYYLKASKDNGVNLVVLGEYVINSFFTELLHMPKNMIKEQS CCCEEEECCHHEECCCCCEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHH EAKKESLIKLAKKYELEIIAPYVSVEAKSYKKLCLKVTPNGVKSYEQQILMPYEHWNEEK HHHHHHHHHHHHHHCEEEEECCCCCCHHHHHEEEEEECCCHHHHHHHHEECCHHHCCCCH FFSNKTPSELKIFTFNYEKLKCALLFGFETHFDIFWQQIMAKKIDLVIVPSACTFESKQR HCCCCCCCCEEEEEEEHHHEEEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHH WEELLKTRAFLNSTSILRVNRIGKTKDEWNFYGDTLFINAFGEIESKLGSEEEMLIIEPK HHHHHHHHHHHCCCCEEEEECCCCCCCCCCEECCEEEEEEHHHHHHHCCCCCCEEEECCC KSDEARKLWGFDKIIKEFKN CCCHHHHHHCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA