| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237855
Identifier: 57237855
GI number: 57237855
Start: 1029669
End: 1030955
Strand: Reverse
Name: 57237855
Synonym: CJE1110
Alternate gene names: NA
Gene position: 1030955-1029669 (Counterclockwise)
Preceding gene: 57237856
Following gene: 57237854
Centisome position: 57.99
GC content: 31.16
Gene sequence:
>1287_bases ATGAGTGAAACTTATGAGATTTATACACCTAATGGATTGGCATTAGATGTGGAAAAAGATACCAATAAAATACTATTTAA AGAAAATATTAAACCCACAGGCAATTATACCGAAGAATATTCCAAAGCTTTGTTTGAAGCACACGACATTAAACGAAACT CCCCCTACAAAGACTATAAACCCCAATACCTAGATCCTAACTTTTATACAGGGCAAAGTTCTACTTTACTTGAATTTAAA GAATGGCAAAGTATTTATTTAAAAGATCCTATAAAAGGAGCTATAGCTCCTTGGACTAAAGCAGAAAAAGCTTATTATAA ATCTTTAAAAACTAAAAGAGAAAGATATAAATATTTAGCAATAAGAAGTGGATTAAGATCTGTGGTTATAGATATACCCT ATGATGCTTATGCTAATGTAGATGAAAAAGGAAATTTAATCAATGAAGAATACGCCTATATTTATGATGAAGTTAACAAT AATAAAGAAACCTTAAAATCTTCTCTTTTTAGACAAGAATGGGGTATAGCAGCAGGAATACTAGGAAAACCTGAATATTT TGTGCGTTCTAAAAATCATGGCTTTAATGCCAGAATGATACAATGTTTTATTTTATATATTCAACTCACAGGTGGAGGAT ATGAAGAATTAGGTATAAAAAGAGGAATTTATAATTATGCCGATAATCTTTTAGAAATAGGTATAGGTATGGCAGGGATA CATAAAAATCCTTTAAGGGCTAAATTAGTAAAAGATTTAGCTAAAACTATACAGCCTGATGAATTTGGTATGCTTCCTTT TATAGATGAGATTATGGGAGTAGATTGGGTGATAGATTTAAATCGATATAAATTTGCTCTTGATGAAGAAGGCAGAATTA TTTGGGCTTTATATGATGATATTGAAAAAGGTAAATTAAAAGATCCAAGAGATGTGGATTCTACTTCTGAAAGCAGGAAA GAATTTGATCATTATATGGATGGATATGTAAATGGAATGGAAACTAGATTCGATGCTGATATTCCAAATGATTGGGGTGA TCGACAAGCTACTTTATTCAAAGATACTCTAGTATTAAGCGCCAAACTAGCAGCCTTAACTCCTCCTCAAGGCTATCCTA ATGCTCCAAGATACTATAGCCCTGAAAGACTAGAAATTATTTATAAAAGACATAAGCTTGATAAACTTCTTGACCCAAGA ATTCCTGCTATTTATAGATATAATTTTCCGCAAGAACTTCGAGCTAAAATACTAGCTTATGCTAAAGAGCATAATATAAA AGAGTAA
Upstream 100 bases:
>100_bases TAAAGAGCATAATATAAAAGAGTAAGAATGAATTTCATTAGCTACTACTATCATTATGAAAAATGGTTTATATATGGGTT AAATTAAGAAAGGATAGATA
Downstream 100 bases:
>100_bases TTTAATCAAAATAAAAAAATATTTAAAGTAAAATAAAAACAAAAGGAAAAACAATGCAAAAAATACTTCAAATCGATTTA GAAAAAAGAAAAGCTTTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MSETYEIYTPNGLALDVEKDTNKILFKENIKPTGNYTEEYSKALFEAHDIKRNSPYKDYKPQYLDPNFYTGQSSTLLEFK EWQSIYLKDPIKGAIAPWTKAEKAYYKSLKTKRERYKYLAIRSGLRSVVIDIPYDAYANVDEKGNLINEEYAYIYDEVNN NKETLKSSLFRQEWGIAAGILGKPEYFVRSKNHGFNARMIQCFILYIQLTGGGYEELGIKRGIYNYADNLLEIGIGMAGI HKNPLRAKLVKDLAKTIQPDEFGMLPFIDEIMGVDWVIDLNRYKFALDEEGRIIWALYDDIEKGKLKDPRDVDSTSESRK EFDHYMDGYVNGMETRFDADIPNDWGDRQATLFKDTLVLSAKLAALTPPQGYPNAPRYYSPERLEIIYKRHKLDKLLDPR IPAIYRYNFPQELRAKILAYAKEHNIKE
Sequences:
>Translated_428_residues MSETYEIYTPNGLALDVEKDTNKILFKENIKPTGNYTEEYSKALFEAHDIKRNSPYKDYKPQYLDPNFYTGQSSTLLEFK EWQSIYLKDPIKGAIAPWTKAEKAYYKSLKTKRERYKYLAIRSGLRSVVIDIPYDAYANVDEKGNLINEEYAYIYDEVNN NKETLKSSLFRQEWGIAAGILGKPEYFVRSKNHGFNARMIQCFILYIQLTGGGYEELGIKRGIYNYADNLLEIGIGMAGI HKNPLRAKLVKDLAKTIQPDEFGMLPFIDEIMGVDWVIDLNRYKFALDEEGRIIWALYDDIEKGKLKDPRDVDSTSESRK EFDHYMDGYVNGMETRFDADIPNDWGDRQATLFKDTLVLSAKLAALTPPQGYPNAPRYYSPERLEIIYKRHKLDKLLDPR IPAIYRYNFPQELRAKILAYAKEHNIKE >Mature_427_residues SETYEIYTPNGLALDVEKDTNKILFKENIKPTGNYTEEYSKALFEAHDIKRNSPYKDYKPQYLDPNFYTGQSSTLLEFKE WQSIYLKDPIKGAIAPWTKAEKAYYKSLKTKRERYKYLAIRSGLRSVVIDIPYDAYANVDEKGNLINEEYAYIYDEVNNN KETLKSSLFRQEWGIAAGILGKPEYFVRSKNHGFNARMIQCFILYIQLTGGGYEELGIKRGIYNYADNLLEIGIGMAGIH KNPLRAKLVKDLAKTIQPDEFGMLPFIDEIMGVDWVIDLNRYKFALDEEGRIIWALYDDIEKGKLKDPRDVDSTSESRKE FDHYMDGYVNGMETRFDADIPNDWGDRQATLFKDTLVLSAKLAALTPPQGYPNAPRYYSPERLEIIYKRHKLDKLLDPRI PAIYRYNFPQELRAKILAYAKEHNIKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49790; Mature: 49659
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETYEIYTPNGLALDVEKDTNKILFKENIKPTGNYTEEYSKALFEAHDIKRNSPYKDYK CCCCEEEECCCCEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC PQYLDPNFYTGQSSTLLEFKEWQSIYLKDPIKGAIAPWTKAEKAYYKSLKTKRERYKYLA CCCCCCCEECCCCCCHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH IRSGLRSVVIDIPYDAYANVDEKGNLINEEYAYIYDEVNNNKETLKSSLFRQEWGIAAGI HHHCCCEEEEECCCHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEECC LGKPEYFVRSKNHGFNARMIQCFILYIQLTGGGYEELGIKRGIYNYADNLLEIGIGMAGI CCCCHHEEECCCCCCCHHHHEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC HKNPLRAKLVKDLAKTIQPDEFGMLPFIDEIMGVDWVIDLNRYKFALDEEGRIIWALYDD CCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEEEECCCEEEEECCCCCEEEEEECC IEKGKLKDPRDVDSTSESRKEFDHYMDGYVNGMETRFDADIPNDWGDRQATLFKDTLVLS CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCHHHHHHHHHHH AKLAALTPPQGYPNAPRYYSPERLEIIYKRHKLDKLLDPRIPAIYRYNFPQELRAKILAY HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHH AKEHNIKE HHHCCCCC >Mature Secondary Structure SETYEIYTPNGLALDVEKDTNKILFKENIKPTGNYTEEYSKALFEAHDIKRNSPYKDYK CCCEEEECCCCEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC PQYLDPNFYTGQSSTLLEFKEWQSIYLKDPIKGAIAPWTKAEKAYYKSLKTKRERYKYLA CCCCCCCEECCCCCCHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH IRSGLRSVVIDIPYDAYANVDEKGNLINEEYAYIYDEVNNNKETLKSSLFRQEWGIAAGI HHHCCCEEEEECCCHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEECC LGKPEYFVRSKNHGFNARMIQCFILYIQLTGGGYEELGIKRGIYNYADNLLEIGIGMAGI CCCCHHEEECCCCCCCHHHHEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC HKNPLRAKLVKDLAKTIQPDEFGMLPFIDEIMGVDWVIDLNRYKFALDEEGRIIWALYDD CCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEEEECCCEEEEECCCCCEEEEEECC IEKGKLKDPRDVDSTSESRKEFDHYMDGYVNGMETRFDADIPNDWGDRQATLFKDTLVLS CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCHHHHHHHHHHH AKLAALTPPQGYPNAPRYYSPERLEIIYKRHKLDKLLDPRIPAIYRYNFPQELRAKILAY HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHH AKEHNIKE HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA