Definition | Campylobacter jejuni RM1221, complete genome. |
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Accession | NC_003912 |
Length | 1,777,831 |
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The map label for this gene is 57237823
Identifier: 57237823
GI number: 57237823
Start: 1005841
End: 1006413
Strand: Reverse
Name: 57237823
Synonym: CJE1078
Alternate gene names: NA
Gene position: 1006413-1005841 (Counterclockwise)
Preceding gene: 57237824
Following gene: 57237820
Centisome position: 56.61
GC content: 30.54
Gene sequence:
>573_bases ATGAAAAAAATTCTTGTAAGTGTTTTAAGTTCTTGCTTGTTAGCTTCGGCTTTAAGTGCTGTATCTTTTAAAGAAGATAG TTTAAAGGTTTCTTTTGAAGGATATAAAACTAAAGATATGATAGGAACAAAAGGTGAATTTAAAAATGTAGAATATAAAT TTTCTAAAAGTATAAAGGATTTGGCAAGTTATCTTAAAGGCGCTAAAGCTACCATAAAGCCAAGCAATGCTTTTATGGGT GAAGGCAATGATATTATAACCAATAATATCACAAAAGTATTTTTCCCTGCTTTATTGGGAGATACGGATATTAAAGTTGT TTTTCAAGATGTGATTGCGGGTGAAAATAAAGGCGTTATTTCAGCAAAAATTACTATGGATAAAAAAAGTACTATTGTAC CTTTAACTTATACCATCAAAGATAATAAATTTGAAGCTAAAGGACAACTTGATTTGCATACTTTTAAAAATGGTTCTAAA GCATTAAAAGCATTAAGCGATGTTGCTGCAGGACATGGTGGAATTTCTTGGCCTTTAGTGGATATCAGTTTTAACGCTGA CCTAGCAGAATAA
Upstream 100 bases:
>100_bases TGGTAATAAAAATTATTTTTTATTTTAGAAAATTTTATTTTATTAATCAACTAAGAATATAATTTAATTCATTAATTAAA TTTATTAAAAAGGAATAAAG
Downstream 100 bases:
>100_bases AAAGTAGCCTTAGGGCTACTTTAAAATACAATATTTTCTTAAATTATTTTCAAAAATTTCATAATCTTTTATATTTTCAA GTTCTTGATAAATTTCACTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MKKILVSVLSSCLLASALSAVSFKEDSLKVSFEGYKTKDMIGTKGEFKNVEYKFSKSIKDLASYLKGAKATIKPSNAFMG EGNDIITNNITKVFFPALLGDTDIKVVFQDVIAGENKGVISAKITMDKKSTIVPLTYTIKDNKFEAKGQLDLHTFKNGSK ALKALSDVAAGHGGISWPLVDISFNADLAE
Sequences:
>Translated_190_residues MKKILVSVLSSCLLASALSAVSFKEDSLKVSFEGYKTKDMIGTKGEFKNVEYKFSKSIKDLASYLKGAKATIKPSNAFMG EGNDIITNNITKVFFPALLGDTDIKVVFQDVIAGENKGVISAKITMDKKSTIVPLTYTIKDNKFEAKGQLDLHTFKNGSK ALKALSDVAAGHGGISWPLVDISFNADLAE >Mature_190_residues MKKILVSVLSSCLLASALSAVSFKEDSLKVSFEGYKTKDMIGTKGEFKNVEYKFSKSIKDLASYLKGAKATIKPSNAFMG EGNDIITNNITKVFFPALLGDTDIKVVFQDVIAGENKGVISAKITMDKKSTIVPLTYTIKDNKFEAKGQLDLHTFKNGSK ALKALSDVAAGHGGISWPLVDISFNADLAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20508; Mature: 20508
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILVSVLSSCLLASALSAVSFKEDSLKVSFEGYKTKDMIGTKGEFKNVEYKFSKSIKD CHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEHHHHHHHH LASYLKGAKATIKPSNAFMGEGNDIITNNITKVFFPALLGDTDIKVVFQDVIAGENKGVI HHHHHCCCCEEECCCCCCCCCCCEEEECCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEE SAKITMDKKSTIVPLTYTIKDNKFEAKGQLDLHTFKNGSKALKALSDVAAGHGGISWPLV EEEEEECCCCEEEEEEEEEECCEEECCCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEE DISFNADLAE EEEECCCCCC >Mature Secondary Structure MKKILVSVLSSCLLASALSAVSFKEDSLKVSFEGYKTKDMIGTKGEFKNVEYKFSKSIKD CHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEHHHHHHHH LASYLKGAKATIKPSNAFMGEGNDIITNNITKVFFPALLGDTDIKVVFQDVIAGENKGVI HHHHHCCCCEEECCCCCCCCCCCEEEECCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEE SAKITMDKKSTIVPLTYTIKDNKFEAKGQLDLHTFKNGSKALKALSDVAAGHGGISWPLV EEEEEECCCCEEEEEEEEEECCEEECCCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEE DISFNADLAE EEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA