| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237774
Identifier: 57237774
GI number: 57237774
Start: 964355
End: 965701
Strand: Direct
Name: 57237774
Synonym: CJE1024
Alternate gene names: NA
Gene position: 964355-965701 (Clockwise)
Preceding gene: 161486705
Following gene: 57237790
Centisome position: 54.24
GC content: 25.98
Gene sequence:
>1347_bases ATGAAATCTTGTTTATATTTTACTTTTATAGTGCTATTTTTAACAGCTTGTTCAACAAAAAATTTAACTTCGCTTCATCA TGAAAATTTAGAACAAAAAAATGAAAATCAACATTATGCAAAACTTGAATACGAACAAAATGTAAGCATTTTACCACAAT TTACTTACAATATTAATTTTGATGTAAAACGATATAAAAAACATTTCTTTAATCCTTGGCATGATTCATTTAAAAATTAC AAAGGACAAAATATTTTTTGGTCCTTTCCTTTATATTTAAATTCAAAAAATACTTATTATTTTTTCAATAAACAAATTAT TCCACTTTCATGGTTTAAAAACGCTATAAATAACGCAAATATCCAAGAATTCGGTAAACTTAATCAAAAAGCTTTAATTA TCCAAAATACAATTATTAAAAATCTTCCAACCCAAAGAGCTATCTTAAAAAATCCTTTTTTTGAAAATGAAGGAATTCCT TTTGACTATGCAAGCGATGGCATTTTAAATACTGGAACCCCTGTCTTAATTTCACATTTTAGTAAAGATAAGCGTTATGC TTTTGTTTTAGGTGAAGCTGGATTTGGATTTGTTGAAAGTAAAAATTTGGAATTTTTCTCAAACGATAGAGCGAAAATCT ATGAAAATCTCAACTTTATCACACCACTAAAAGAAAAATTTCCTATCTATAGCGAGGATGGTAAATTTTTCTTTGAAAGT AGAATTGGCGCTATTTATCCTTACTACAAAGAAGATAAAAACTATTTTTATGGAAAAATAGGTTCTAAAAAATATAAAAT TTCTAAAAAAGATGTATCTAAATTTCCTTTACAATTCAATGATAAAAATTTAAAAAATCAACTTTCACAAGTTTTAAATT TGCCTTATGGCTGGGGCGGTTATAATTTTGAAAGAGATTGTTCTTTACTAACTCGTGATATCTTTTCAGCTTTTGGACTT TATCTACCAAGAAATTCAGCTGCACAAAAAAATTCTTTTAATCATTTTGATATAAGCACTCTTAGTAATTCTCAAAAAAA AGATTTTTTAAACCGCTTTGGGAAAGCTTATCTTAGTTTACTTTATTTACCTGGACATATTATGCTTTATGCGGGACAAA TTACAGATAATAATATTGCCATACATAATATATGGGGCTTAAGAAAAGATGCAACCCAAAGACTTCTCATAAGTTCTAGC GTCATCACTTCTTTAGAAATAGGAAAAAATGAAATTTTAGAAGATAATTTGCTTTTATCAAGACTTAAAGAAATAAGTTT TATAAATTTAAACGAACAAGAAAAAGAGCAAATAAAAAGCTATCTTGAAAATATACAAAACAAATAA
Upstream 100 bases:
>100_bases CACTTAAAAAAACATTATCATAAGCTAAAATTTTTTCTAGTTTATCAAGCATTATATTTCCTTAGCTTTAATTATAACTA TTTTTTCTAAAAGGTTGATT
Downstream 100 bases:
>100_bases GATTTATTGATTTAATCAATAAATCTTTTAGTTAAATCTGCAAAATATTCTATGCGTCTATCTCGCAAAAAAGGCCACCA ACGACGCACATTTTCACTTC
Product: lipoprotein
Products: NA
Alternate protein names: Lipoprotein; Cell Wall-Associated Hydrolase; Cell Wall-Associated Hydrolases; Nlp/P60 Protein; NLP/P60 Family Lipoprotein; NlpC-P60 Family Protein; NlpC/P60 Family Protein; Cell Wall-Associated Hydrolase Protein; Lipoprotein NLP/P60 Family; DNA Gyrase Subunit A
Number of amino acids: Translated: 448; Mature: 448
Protein sequence:
>448_residues MKSCLYFTFIVLFLTACSTKNLTSLHHENLEQKNENQHYAKLEYEQNVSILPQFTYNINFDVKRYKKHFFNPWHDSFKNY KGQNIFWSFPLYLNSKNTYYFFNKQIIPLSWFKNAINNANIQEFGKLNQKALIIQNTIIKNLPTQRAILKNPFFENEGIP FDYASDGILNTGTPVLISHFSKDKRYAFVLGEAGFGFVESKNLEFFSNDRAKIYENLNFITPLKEKFPIYSEDGKFFFES RIGAIYPYYKEDKNYFYGKIGSKKYKISKKDVSKFPLQFNDKNLKNQLSQVLNLPYGWGGYNFERDCSLLTRDIFSAFGL YLPRNSAAQKNSFNHFDISTLSNSQKKDFLNRFGKAYLSLLYLPGHIMLYAGQITDNNIAIHNIWGLRKDATQRLLISSS VITSLEIGKNEILEDNLLLSRLKEISFINLNEQEKEQIKSYLENIQNK
Sequences:
>Translated_448_residues MKSCLYFTFIVLFLTACSTKNLTSLHHENLEQKNENQHYAKLEYEQNVSILPQFTYNINFDVKRYKKHFFNPWHDSFKNY KGQNIFWSFPLYLNSKNTYYFFNKQIIPLSWFKNAINNANIQEFGKLNQKALIIQNTIIKNLPTQRAILKNPFFENEGIP FDYASDGILNTGTPVLISHFSKDKRYAFVLGEAGFGFVESKNLEFFSNDRAKIYENLNFITPLKEKFPIYSEDGKFFFES RIGAIYPYYKEDKNYFYGKIGSKKYKISKKDVSKFPLQFNDKNLKNQLSQVLNLPYGWGGYNFERDCSLLTRDIFSAFGL YLPRNSAAQKNSFNHFDISTLSNSQKKDFLNRFGKAYLSLLYLPGHIMLYAGQITDNNIAIHNIWGLRKDATQRLLISSS VITSLEIGKNEILEDNLLLSRLKEISFINLNEQEKEQIKSYLENIQNK >Mature_448_residues MKSCLYFTFIVLFLTACSTKNLTSLHHENLEQKNENQHYAKLEYEQNVSILPQFTYNINFDVKRYKKHFFNPWHDSFKNY KGQNIFWSFPLYLNSKNTYYFFNKQIIPLSWFKNAINNANIQEFGKLNQKALIIQNTIIKNLPTQRAILKNPFFENEGIP FDYASDGILNTGTPVLISHFSKDKRYAFVLGEAGFGFVESKNLEFFSNDRAKIYENLNFITPLKEKFPIYSEDGKFFFES RIGAIYPYYKEDKNYFYGKIGSKKYKISKKDVSKFPLQFNDKNLKNQLSQVLNLPYGWGGYNFERDCSLLTRDIFSAFGL YLPRNSAAQKNSFNHFDISTLSNSQKKDFLNRFGKAYLSLLYLPGHIMLYAGQITDNNIAIHNIWGLRKDATQRLLISSS VITSLEIGKNEILEDNLLLSRLKEISFINLNEQEKEQIKSYLENIQNK
Specific function: Unknown
COG id: COG0791
COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52498; Mature: 52498
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSCLYFTFIVLFLTACSTKNLTSLHHENLEQKNENQHYAKLEYEQNVSILPQFTYNINF CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEEEECC DVKRYKKHFFNPWHDSFKNYKGQNIFWSFPLYLNSKNTYYFFNKQIIPLSWFKNAINNAN CHHHHHHHCCCHHHHHHHCCCCCEEEEEEEEEECCCCEEEEECCEEEEHHHHHHHHCCCC IQEFGKLNQKALIIQNTIIKNLPTQRAILKNPFFENEGIPFDYASDGILNTGTPVLISHF HHHHHCCCCCEEEEEHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHEECC SKDKRYAFVLGEAGFGFVESKNLEFFSNDRAKIYENLNFITPLKEKFPIYSEDGKFFFES CCCCEEEEEEECCCCCEEECCCCEEECCCHHHHHHCCCCCCCHHHHCCCCCCCCCEEEEC RIGAIYPYYKEDKNYFYGKIGSKKYKISKKDVSKFPLQFNDKNLKNQLSQVLNLPYGWGG CCCCCCCEEECCCCEEEEECCCCEEEECHHHHHHCCCEECCCHHHHHHHHHHCCCCCCCC YNFERDCSLLTRDIFSAFGLYLPRNSAAQKNSFNHFDISTLSNSQKKDFLNRFGKAYLSL CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHCCCCHHHHHHHHHHHHHHHH LYLPGHIMLYAGQITDNNIAIHNIWGLRKDATQRLLISSSVITSLEIGKNEILEDNLLLS HHCCCEEEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH RLKEISFINLNEQEKEQIKSYLENIQNK HHHHCEEECCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKSCLYFTFIVLFLTACSTKNLTSLHHENLEQKNENQHYAKLEYEQNVSILPQFTYNINF CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEEEECC DVKRYKKHFFNPWHDSFKNYKGQNIFWSFPLYLNSKNTYYFFNKQIIPLSWFKNAINNAN CHHHHHHHCCCHHHHHHHCCCCCEEEEEEEEEECCCCEEEEECCEEEEHHHHHHHHCCCC IQEFGKLNQKALIIQNTIIKNLPTQRAILKNPFFENEGIPFDYASDGILNTGTPVLISHF HHHHHCCCCCEEEEEHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHEECC SKDKRYAFVLGEAGFGFVESKNLEFFSNDRAKIYENLNFITPLKEKFPIYSEDGKFFFES CCCCEEEEEEECCCCCEEECCCCEEECCCHHHHHHCCCCCCCHHHHCCCCCCCCCEEEEC RIGAIYPYYKEDKNYFYGKIGSKKYKISKKDVSKFPLQFNDKNLKNQLSQVLNLPYGWGG CCCCCCCEEECCCCEEEEECCCCEEEECHHHHHHCCCEECCCHHHHHHHHHHCCCCCCCC YNFERDCSLLTRDIFSAFGLYLPRNSAAQKNSFNHFDISTLSNSQKKDFLNRFGKAYLSL CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHCCCCHHHHHHHHHHHHHHHH LYLPGHIMLYAGQITDNNIAIHNIWGLRKDATQRLLISSSVITSLEIGKNEILEDNLLLS HHCCCEEEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH RLKEISFINLNEQEKEQIKSYLENIQNK HHHHCEEECCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA