| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is pckA [H]
Identifier: 57237760
GI number: 57237760
Start: 944364
End: 945938
Strand: Reverse
Name: pckA [H]
Synonym: CJE1010
Alternate gene names: 57237760
Gene position: 945938-944364 (Counterclockwise)
Preceding gene: 57237761
Following gene: 57237759
Centisome position: 53.21
GC content: 32.83
Gene sequence:
>1575_bases ATGAAAAAATTTGATAAGTTAGGTTTGGATAATATAAAGGAAATTTTTCATAATTTAAGTTATGATGAATTAAATGCTCA TGAAAAAGCAAATAATGAAGGTTTAAGCACGGATAATGATACTTTTTGTGTAGATACAGGGATTTTTACAGGTAGAAGTC CTAAAGATAAATATTTTGTAAAACAAGATCCATCTAGTAAATATATAGCTTGGGGAAAGGTAAATCAGCCTATTACAAAA GAATTATTTGATAAACTTTTAACTAAAGCAAAGCAAGAATTAAGCGGAAAGAAAATTTATGTTCAAGATGTTTTTTGCGG TGCTTCTTTGCAAAGTCGCAAAGCAGTAAGATTTGTTACTGAAATTGCATGGCAAGCACATTTTGTTAAAAATATGTTTA TTCGCCCAAGTCAAGAGGAACTTGAGAATTTTAAAGCAGATTTTATTGTTTATAATGCTTGCAAATGCATCAATGAAGAT TACAAACAAGATGGTTTAAATTCAGAGGTTTTTGTGATCTTTAATGTTGAAGAAAATATAGCGGTTATTGGTGGAACTTG GTATGGTGGAGAAATGAAAAAAGGTATTTTTTCTATGATGAATTATTGGTTGCCACTAGAAAATAAACTTTCTATGCATT GTAGTGCAAATGTCGGAGAAAAAGACGATGTGGCACTTTTCTTTGGACTTAGCGGTACAGGAAAAACTACGCTTTCAACC GATCCAAAAAGAAGACTCATAGGTGATGATGAGCATGGCTGGGATGATGAAGGTGTGTTTAATTTTGAGGGCGGTTGCTA TGCAAAAACAATCAATCTTAATCCTGAACATGAGCCTGAAATTTATGGAGCCATTAAAAGAAATGCACTTTTAGAAAATG TAGTTTTAAGAGCTGATAAGAGTGTTGATTATGCTGATGCCTCAAAAACAGAAAACACGAGAGTTTCTTATCCTATAGAG CATATTGAAAATCATGAGCCTAGTCTAAAAGCAGGGCATCCAAAAAATATTATATTTTTAAGTGCAGATGCTTTTGGAAT TTTACCCCCGGTGAGCAAACTAAGCAAAGAGCAGGCTATGTATTATTTTTTAAGTGGCTATACAGCAAAAGTAGCTGGAA CTGAGCGCGGTATAACAGAGCCTCAAGCAACTTTTTCAGCTTGTTTTGGAGAACCTTTTATGCCTTTACATCCAACGGTT TATGCGAGATTGCTTGGTGAAAAGATTGAAAAACATGAAGTTAATGTTTATCTTGTTAATACGGGTTGGAGTGGCGGAAG CTACAGTGTGGGTAAAAGAATGAGCATTAAGGCTACTAGGGCTTGCATTAATGCTATTCTAGATGGAAGTATTACAAAAT GCGAATTTGAAAATTTTGAAGTGTTTGATTTAGCTATTCCAAAAGCTTTAGAAGGTGTAGAAAGTGTACTTTTAAATCCT ATAAATACTTGGTTAGATAAAAATGCTTATATTGCAACAAGAGATAAATTAGCACATATGTTTATACAAAATTTTAAACG TTATGAAGATGTCAAAGAAGGCATTGAATTTAGCAAATTTGGACCAAAAATTTAA
Upstream 100 bases:
>100_bases CCCAAAAGATGGAATTATTTCAGAGCTTTGTATTAAAATAGGTGATACTGTTAATGAAGGCGAAGTATTAGCTATTTACA AGAATTAAAGTGAGGGAAAA
Downstream 100 bases:
>100_bases GGCATTTAAATGAAAAATGAAATGTGGTCAGGACGTTTTAGTGGTGCAAGTGATGAGCTTTTAAAAGAATTTAATGCAAG TTTAAATGTAGATAAAACTT
Product: phosphoenolpyruvate carboxykinase
Products: NA
Alternate protein names: PEP carboxykinase; PEPCK; Phosphoenolpyruvate carboxylase [H]
Number of amino acids: Translated: 524; Mature: 524
Protein sequence:
>524_residues MKKFDKLGLDNIKEIFHNLSYDELNAHEKANNEGLSTDNDTFCVDTGIFTGRSPKDKYFVKQDPSSKYIAWGKVNQPITK ELFDKLLTKAKQELSGKKIYVQDVFCGASLQSRKAVRFVTEIAWQAHFVKNMFIRPSQEELENFKADFIVYNACKCINED YKQDGLNSEVFVIFNVEENIAVIGGTWYGGEMKKGIFSMMNYWLPLENKLSMHCSANVGEKDDVALFFGLSGTGKTTLST DPKRRLIGDDEHGWDDEGVFNFEGGCYAKTINLNPEHEPEIYGAIKRNALLENVVLRADKSVDYADASKTENTRVSYPIE HIENHEPSLKAGHPKNIIFLSADAFGILPPVSKLSKEQAMYYFLSGYTAKVAGTERGITEPQATFSACFGEPFMPLHPTV YARLLGEKIEKHEVNVYLVNTGWSGGSYSVGKRMSIKATRACINAILDGSITKCEFENFEVFDLAIPKALEGVESVLLNP INTWLDKNAYIATRDKLAHMFIQNFKRYEDVKEGIEFSKFGPKI
Sequences:
>Translated_524_residues MKKFDKLGLDNIKEIFHNLSYDELNAHEKANNEGLSTDNDTFCVDTGIFTGRSPKDKYFVKQDPSSKYIAWGKVNQPITK ELFDKLLTKAKQELSGKKIYVQDVFCGASLQSRKAVRFVTEIAWQAHFVKNMFIRPSQEELENFKADFIVYNACKCINED YKQDGLNSEVFVIFNVEENIAVIGGTWYGGEMKKGIFSMMNYWLPLENKLSMHCSANVGEKDDVALFFGLSGTGKTTLST DPKRRLIGDDEHGWDDEGVFNFEGGCYAKTINLNPEHEPEIYGAIKRNALLENVVLRADKSVDYADASKTENTRVSYPIE HIENHEPSLKAGHPKNIIFLSADAFGILPPVSKLSKEQAMYYFLSGYTAKVAGTERGITEPQATFSACFGEPFMPLHPTV YARLLGEKIEKHEVNVYLVNTGWSGGSYSVGKRMSIKATRACINAILDGSITKCEFENFEVFDLAIPKALEGVESVLLNP INTWLDKNAYIATRDKLAHMFIQNFKRYEDVKEGIEFSKFGPKI >Mature_524_residues MKKFDKLGLDNIKEIFHNLSYDELNAHEKANNEGLSTDNDTFCVDTGIFTGRSPKDKYFVKQDPSSKYIAWGKVNQPITK ELFDKLLTKAKQELSGKKIYVQDVFCGASLQSRKAVRFVTEIAWQAHFVKNMFIRPSQEELENFKADFIVYNACKCINED YKQDGLNSEVFVIFNVEENIAVIGGTWYGGEMKKGIFSMMNYWLPLENKLSMHCSANVGEKDDVALFFGLSGTGKTTLST DPKRRLIGDDEHGWDDEGVFNFEGGCYAKTINLNPEHEPEIYGAIKRNALLENVVLRADKSVDYADASKTENTRVSYPIE HIENHEPSLKAGHPKNIIFLSADAFGILPPVSKLSKEQAMYYFLSGYTAKVAGTERGITEPQATFSACFGEPFMPLHPTV YARLLGEKIEKHEVNVYLVNTGWSGGSYSVGKRMSIKATRACINAILDGSITKCEFENFEVFDLAIPKALEGVESVLLNP INTWLDKNAYIATRDKLAHMFIQNFKRYEDVKEGIEFSKFGPKI
Specific function: Rate-limiting gluconeogenic enzyme. [C]
COG id: COG1866
COG function: function code C; Phosphoenolpyruvate carboxykinase (ATP)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoenolpyruvate carboxykinase [ATP] family [H]
Homologues:
Organism=Escherichia coli, GI1789807, Length=535, Percent_Identity=56.6355140186916, Blast_Score=620, Evalue=1e-179, Organism=Saccharomyces cerevisiae, GI6322950, Length=487, Percent_Identity=48.4599589322382, Blast_Score=450, Evalue=1e-127,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001272 - InterPro: IPR013035 - InterPro: IPR008210 - InterPro: IPR015994 [H]
Pfam domain/function: PF01293 PEPCK_ATP [H]
EC number: =4.1.1.49 [H]
Molecular weight: Translated: 59084; Mature: 59084
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: PS00532 PEPCK_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFDKLGLDNIKEIFHNLSYDELNAHEKANNEGLSTDNDTFCVDTGIFTGRSPKDKYFV CCCHHHCCHHHHHHHHHCCCHHHHCCHHCCCCCCCCCCCCCEEEECCEECCCCCCCCEEE KQDPSSKYIAWGKVNQPITKELFDKLLTKAKQELSGKKIYVQDVFCGASLQSRKAVRFVT EECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHH EIAWQAHFVKNMFIRPSQEELENFKADFIVYNACKCINEDYKQDGLNSEVFVIFNVEENI HHHHHHHHHHHHCCCCCHHHHHHCCCCEEEEHHHHHHCHHHHHCCCCCCEEEEEEECCCE AVIGGTWYGGEMKKGIFSMMNYWLPLENKLSMHCSANVGEKDDVALFFGLSGTGKTTLST EEEEEEEECCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCC DPKRRLIGDDEHGWDDEGVFNFEGGCYAKTINLNPEHEPEIYGAIKRNALLENVVLRADK CCHHHCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCC SVDYADASKTENTRVSYPIEHIENHEPSLKAGHPKNIIFLSADAFGILPPVSKLSKEQAM CCCCCCCCCCCCCEEECCHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHEE YYFLSGYTAKVAGTERGITEPQATFSACFGEPFMPLHPTVYARLLGEKIEKHEVNVYLVN EEEECCCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCEEEEEEEE TGWSGGSYSVGKRMSIKATRACINAILDGSITKCEFENFEVFDLAIPKALEGVESVLLNP CCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCEEEECCCEEEEEEHHHHHHHHHHHHHHHH INTWLDKNAYIATRDKLAHMFIQNFKRYEDVKEGIEFSKFGPKI HHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKKFDKLGLDNIKEIFHNLSYDELNAHEKANNEGLSTDNDTFCVDTGIFTGRSPKDKYFV CCCHHHCCHHHHHHHHHCCCHHHHCCHHCCCCCCCCCCCCCEEEECCEECCCCCCCCEEE KQDPSSKYIAWGKVNQPITKELFDKLLTKAKQELSGKKIYVQDVFCGASLQSRKAVRFVT EECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHH EIAWQAHFVKNMFIRPSQEELENFKADFIVYNACKCINEDYKQDGLNSEVFVIFNVEENI HHHHHHHHHHHHCCCCCHHHHHHCCCCEEEEHHHHHHCHHHHHCCCCCCEEEEEEECCCE AVIGGTWYGGEMKKGIFSMMNYWLPLENKLSMHCSANVGEKDDVALFFGLSGTGKTTLST EEEEEEEECCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCC DPKRRLIGDDEHGWDDEGVFNFEGGCYAKTINLNPEHEPEIYGAIKRNALLENVVLRADK CCHHHCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCC SVDYADASKTENTRVSYPIEHIENHEPSLKAGHPKNIIFLSADAFGILPPVSKLSKEQAM CCCCCCCCCCCCCEEECCHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHEE YYFLSGYTAKVAGTERGITEPQATFSACFGEPFMPLHPTVYARLLGEKIEKHEVNVYLVN EEEECCCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCEEEEEEEE TGWSGGSYSVGKRMSIKATRACINAILDGSITKCEFENFEVFDLAIPKALEGVESVLLNP CCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCEEEECCCEEEEEEHHHHHHHHHHHHHHHH INTWLDKNAYIATRDKLAHMFIQNFKRYEDVKEGIEFSKFGPKI HHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA