| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is engD [H]
Identifier: 57237758
GI number: 57237758
Start: 941847
End: 942950
Strand: Direct
Name: engD [H]
Synonym: CJE1008
Alternate gene names: 57237758
Gene position: 941847-942950 (Clockwise)
Preceding gene: 57237757
Following gene: 57237764
Centisome position: 52.98
GC content: 33.97
Gene sequence:
>1104_bases ATGAGTTTAAGCGTAGGTATAGTAGGACTTCCAAATGTTGGCAAATCAACAACTTTTAATGCTTTAACTAAAGCACAAAA TGCCCAAAGTGCAAACTATCCTTTCTGCACCATAGAGCCTAATAAAGCCATGGTTGAAGTTCCTGATTTAAGACTTAATG AACTTGCTAAAATAGTAAAACCTGAAAGAATTATACATTCTTTAATAGAATTTGTAGATATCGCTGGACTTGTTAAAGGC GCAAGTAAAGGCGAAGGCTTGGGAAATAAATTTCTTTCAAATATACGTGAAACTGAGGTTATTTTGCATATAGTACGTTG TTTTGATGAAGAAAATATTACCCATGTTGAAGGTGGAGTTGATCCTTTACGTGATGTAGAAATTATCAATACAGAGCTTA TTTTAGCAGATATTGAACAACTGAGTAAAAAAATAGAAAAACTCACCAAAGAAGCCAAAGCCAATCAAAAGGGTGCTAAA GAAAGTCTCGAACTTGCAAATTCCTTACTTGATCATTTAAACAAAGGCTTAGCTGCAAGTTCTTACCCTGAAAAAGAAAG TGAAATTTATCAAGCCTTAATCAAAGAATTAAGACTGCTTTCTGCTAAAGAAGTGATTTATGGTGCAAATGTTGATGAAA ATGGTATTAGTGAAGATAATGATTATGTAAAAGCTTTAAAAGAATATGCTAAAAAAAATGATCATGAAGTTATCAAGCTT TGTGCAAAAATCGAAGAAGAATTAGTAGGATTAAGCGATGAAGAAAGTCATGAATTTTTAAGTTCTCTAGGAGTTAACGA AAGCGGTCTTGATCAAATCATACGCACTGCTTTTGCTAAGCTTGGACTGATCAGTTATTTTACCGCTGGTGTAGTTGAAG TGCGTTCTTGGACAATCAAAAAAGGCTGGAAAGCACCAAAAGCAGCAAGTGTAATTCACAATGACTTTGAAAAAGGCTTT ATAAAAGCTGAAGTTATTTCCTATGAAGATTATATCCAATACAAAGGCGAAAATGGCGCCAAAGAAGCAGGAAAGCTACG CCTTGAAGGAAAAGACTATATCGTTTTAGATGGCGATGTAATGCATTTTAGATTCAATGTTTAG
Upstream 100 bases:
>100_bases CTTATACAGAAAAATCTTGGGGATATTCTAGTTTTGGCGCAGGTGGAGCTGGAGTTAGAATGTGTGTTAATTATTTAATT CAAATTTTAAGGAAAGCTAA
Downstream 100 bases:
>100_bases GCAAAATAGCCTAAACAATATTTATAAATTTTGAATAAAACCTTCCAAAATTTGAATTTGCTTTTCTACGCTTGCAATAG AACTTGAGCCTTCACTTTGC
Product: GTP-dependent nucleic acid-binding protein EngD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MSLSVGIVGLPNVGKSTTFNALTKAQNAQSANYPFCTIEPNKAMVEVPDLRLNELAKIVKPERIIHSLIEFVDIAGLVKG ASKGEGLGNKFLSNIRETEVILHIVRCFDEENITHVEGGVDPLRDVEIINTELILADIEQLSKKIEKLTKEAKANQKGAK ESLELANSLLDHLNKGLAASSYPEKESEIYQALIKELRLLSAKEVIYGANVDENGISEDNDYVKALKEYAKKNDHEVIKL CAKIEEELVGLSDEESHEFLSSLGVNESGLDQIIRTAFAKLGLISYFTAGVVEVRSWTIKKGWKAPKAASVIHNDFEKGF IKAEVISYEDYIQYKGENGAKEAGKLRLEGKDYIVLDGDVMHFRFNV
Sequences:
>Translated_367_residues MSLSVGIVGLPNVGKSTTFNALTKAQNAQSANYPFCTIEPNKAMVEVPDLRLNELAKIVKPERIIHSLIEFVDIAGLVKG ASKGEGLGNKFLSNIRETEVILHIVRCFDEENITHVEGGVDPLRDVEIINTELILADIEQLSKKIEKLTKEAKANQKGAK ESLELANSLLDHLNKGLAASSYPEKESEIYQALIKELRLLSAKEVIYGANVDENGISEDNDYVKALKEYAKKNDHEVIKL CAKIEEELVGLSDEESHEFLSSLGVNESGLDQIIRTAFAKLGLISYFTAGVVEVRSWTIKKGWKAPKAASVIHNDFEKGF IKAEVISYEDYIQYKGENGAKEAGKLRLEGKDYIVLDGDVMHFRFNV >Mature_366_residues SLSVGIVGLPNVGKSTTFNALTKAQNAQSANYPFCTIEPNKAMVEVPDLRLNELAKIVKPERIIHSLIEFVDIAGLVKGA SKGEGLGNKFLSNIRETEVILHIVRCFDEENITHVEGGVDPLRDVEIINTELILADIEQLSKKIEKLTKEAKANQKGAKE SLELANSLLDHLNKGLAASSYPEKESEIYQALIKELRLLSAKEVIYGANVDENGISEDNDYVKALKEYAKKNDHEVIKLC AKIEEELVGLSDEESHEFLSSLGVNESGLDQIIRTAFAKLGLISYFTAGVVEVRSWTIKKGWKAPKAASVIHNDFEKGFI KAEVISYEDYIQYKGENGAKEAGKLRLEGKDYIVLDGDVMHFRFNV
Specific function: GTP-dependent nucleic acid-binding protein which may act as a translation factor [H]
COG id: COG0012
COG function: function code J; Predicted GTPase, probable translation factor
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI58761500, Length=374, Percent_Identity=45.4545454545455, Blast_Score=294, Evalue=8e-80, Organism=Homo sapiens, GI58761502, Length=172, Percent_Identity=44.7674418604651, Blast_Score=140, Evalue=2e-33, Organism=Escherichia coli, GI1787454, Length=368, Percent_Identity=54.8913043478261, Blast_Score=400, Evalue=1e-113, Organism=Escherichia coli, GI1789574, Length=129, Percent_Identity=34.1085271317829, Blast_Score=71, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17509631, Length=372, Percent_Identity=43.010752688172, Blast_Score=275, Evalue=3e-74, Organism=Saccharomyces cerevisiae, GI6319499, Length=374, Percent_Identity=45.4545454545455, Blast_Score=278, Evalue=8e-76, Organism=Saccharomyces cerevisiae, GI6321773, Length=379, Percent_Identity=35.3562005277045, Blast_Score=213, Evalue=3e-56, Organism=Saccharomyces cerevisiae, GI6321649, Length=174, Percent_Identity=37.3563218390805, Blast_Score=96, Evalue=7e-21, Organism=Drosophila melanogaster, GI24640873, Length=369, Percent_Identity=43.0894308943089, Blast_Score=273, Evalue=1e-73, Organism=Drosophila melanogaster, GI24640877, Length=369, Percent_Identity=43.0894308943089, Blast_Score=273, Evalue=1e-73, Organism=Drosophila melanogaster, GI24640875, Length=369, Percent_Identity=43.0894308943089, Blast_Score=273, Evalue=1e-73, Organism=Drosophila melanogaster, GI24640879, Length=326, Percent_Identity=41.1042944785276, Blast_Score=219, Evalue=2e-57, Organism=Drosophila melanogaster, GI24585318, Length=173, Percent_Identity=32.9479768786127, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012675 - InterPro: IPR004396 - InterPro: IPR013029 - InterPro: IPR006073 - InterPro: IPR002917 - InterPro: IPR012676 - InterPro: IPR023192 [H]
Pfam domain/function: PF01926 MMR_HSR1; PF06071 YchF-GTPase_C [H]
EC number: NA
Molecular weight: Translated: 40666; Mature: 40535
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSVGIVGLPNVGKSTTFNALTKAQNAQSANYPFCTIEPNKAMVEVPDLRLNELAKIVK CCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCEEECCCCCHHHHHHHHC PERIIHSLIEFVDIAGLVKGASKGEGLGNKFLSNIRETEVILHIVRCFDEENITHVEGGV HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCC DPLRDVEIINTELILADIEQLSKKIEKLTKEAKANQKGAKESLELANSLLDHLNKGLAAS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCC SYPEKESEIYQALIKELRLLSAKEVIYGANVDENGISEDNDYVKALKEYAKKNDHEVIKL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHH CAKIEEELVGLSDEESHEFLSSLGVNESGLDQIIRTAFAKLGLISYFTAGVVEVRSWTIK HHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KGWKAPKAASVIHNDFEKGFIKAEVISYEDYIQYKGENGAKEAGKLRLEGKDYIVLDGDV CCCCCCHHHHHHHHHHHHCCHHHHEECHHHHHHCCCCCCCCCCCCEEECCCCEEEECCCE MHFRFNV EEEEECC >Mature Secondary Structure SLSVGIVGLPNVGKSTTFNALTKAQNAQSANYPFCTIEPNKAMVEVPDLRLNELAKIVK CCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCEEECCCCCHHHHHHHHC PERIIHSLIEFVDIAGLVKGASKGEGLGNKFLSNIRETEVILHIVRCFDEENITHVEGGV HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCC DPLRDVEIINTELILADIEQLSKKIEKLTKEAKANQKGAKESLELANSLLDHLNKGLAAS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCC SYPEKESEIYQALIKELRLLSAKEVIYGANVDENGISEDNDYVKALKEYAKKNDHEVIKL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHH CAKIEEELVGLSDEESHEFLSSLGVNESGLDQIIRTAFAKLGLISYFTAGVVEVRSWTIK HHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KGWKAPKAASVIHNDFEKGFIKAEVISYEDYIQYKGENGAKEAGKLRLEGKDYIVLDGDV CCCCCCHHHHHHHHHHHHCCHHHHEECHHHHHHCCCCCCCCCCCCEEECCCCEEEECCCE MHFRFNV EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA