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The map label for this gene is ycfF [C]

Identifier: 57237727

GI number: 57237727

Start: 917730

End: 918095

Strand: Direct

Name: ycfF [C]

Synonym: CJE0977

Alternate gene names: 57237727

Gene position: 917730-918095 (Clockwise)

Preceding gene: 57237714

Following gene: 57237730

Centisome position: 51.62

GC content: 31.42

Gene sequence:

>366_bases
ATGCAAGAAAAAACAATTTTTGAACTCATAGTTGAAGGTAAACTTCCATGCAATAAAGTGCTTGAAAGTGACGATTTTCT
AGCATTTCATGATATTGCACCCAAAGCACCCATACATATACTTATAATCCCTAAAAAATATTTTAAAGACTTTCAAGAAT
TTGATCCTGAACTTATGGCCAAAATGACAAGTTTCATACAAGAATTAGCTGTTCTTTTAGGTGTAGATAAAAGTGGATAT
CGCTTGGTAACAAACTGTGGAAAAAATAGTGGACAAGAAGTTTTTCATTTGCATTTTCATATGCTTGGAGGTTTTGAACT
GCCTAAGGAAAAAACAAAAAAAGAAAATCCTCAAGCTTTATTTTAG

Upstream 100 bases:

>100_bases
TTTCAAGTTCTAATTCTATTAAAAACTATTTTAAATTCAGCATAAAAACCAAACTTTAAAGATATAATTGTATCAAACCA
ACAATAAAAAAGGATAAATA

Downstream 100 bases:

>100_bases
TTTAAATGGTAGAAAAACTACCATTTAAACTATTTTGTCAAAGGTAGCAACATTCCCTCATATAATTTTTGATAAATTTC
ATCACCGCATAACTTTTTAG

Product: HIT family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MQEKTIFELIVEGKLPCNKVLESDDFLAFHDIAPKAPIHILIIPKKYFKDFQEFDPELMAKMTSFIQELAVLLGVDKSGY
RLVTNCGKNSGQEVFHLHFHMLGGFELPKEKTKKENPQALF

Sequences:

>Translated_121_residues
MQEKTIFELIVEGKLPCNKVLESDDFLAFHDIAPKAPIHILIIPKKYFKDFQEFDPELMAKMTSFIQELAVLLGVDKSGY
RLVTNCGKNSGQEVFHLHFHMLGGFELPKEKTKKENPQALF
>Mature_121_residues
MQEKTIFELIVEGKLPCNKVLESDDFLAFHDIAPKAPIHILIIPKKYFKDFQEFDPELMAKMTSFIQELAVLLGVDKSGY
RLVTNCGKNSGQEVFHLHFHMLGGFELPKEKTKKENPQALF

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Homo sapiens, GI4885413, Length=106, Percent_Identity=40.5660377358491, Blast_Score=88, Evalue=2e-18,
Organism=Homo sapiens, GI14211923, Length=106, Percent_Identity=40.5660377358491, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1787346, Length=110, Percent_Identity=38.1818181818182, Blast_Score=77, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17506713, Length=106, Percent_Identity=41.5094339622642, Blast_Score=91, Evalue=9e-20,
Organism=Drosophila melanogaster, GI24581222, Length=109, Percent_Identity=39.4495412844037, Blast_Score=86, Evalue=4e-18,
Organism=Drosophila melanogaster, GI28574010, Length=109, Percent_Identity=39.4495412844037, Blast_Score=86, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 13881; Mature: 13881

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEKTIFELIVEGKLPCNKVLESDDFLAFHDIAPKAPIHILIIPKKYFKDFQEFDPELMA
CCCHHHHHHHHCCCCCHHHHCCCCCCEEEECCCCCCCEEEEEECHHHHHHHHHCCHHHHH
KMTSFIQELAVLLGVDKSGYRLVTNCGKNSGQEVFHLHFHMLGGFELPKEKTKKENPQAL
HHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCC
F
C
>Mature Secondary Structure
MQEKTIFELIVEGKLPCNKVLESDDFLAFHDIAPKAPIHILIIPKKYFKDFQEFDPELMA
CCCHHHHHHHHCCCCCHHHHCCCCCCEEEECCCCCCCEEEEEECHHHHHHHHHCCHHHHH
KMTSFIQELAVLLGVDKSGYRLVTNCGKNSGQEVFHLHFHMLGGFELPKEKTKKENPQAL
HHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCC
F
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]