Definition | Campylobacter jejuni RM1221, complete genome. |
---|---|
Accession | NC_003912 |
Length | 1,777,831 |
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The map label for this gene is dsbB [C]
Identifier: 57237706
GI number: 57237706
Start: 889447
End: 890232
Strand: Direct
Name: dsbB [C]
Synonym: CJE0952
Alternate gene names: 57237706
Gene position: 889447-890232 (Clockwise)
Preceding gene: 57237705
Following gene: 57237707
Centisome position: 50.03
GC content: 31.17
Gene sequence:
>786_bases ATGAAAGATAATTGCAGAAATTTTTCACTTTCCAAATGGCAAGATACGCGCAAACCTTGGTTGATTTTGATTATAGTTAC TATAGGGCTTACTTGTATAGCACATTTTTTATTTCAAGAATATCTTTTTATGAAACCTTGTGAACAATGTGTGTATATAA GATTTGATATGCTTGTTATGGCTATAGGTGGTATGATTGCATTAATCAACCCTGCAAATAATATTATAAAAATTTTTTCT TATAGCTTAGCTTTTTATGGAATTTGGCTTGGCTTGGAGCATTGTCTAACTTTAAATCATATCCATGAAGTGGTTCATTC TGAAAATCCTTTTGCAGGCGTAGATGGATGTCGTGAAATTCCTATTTATCCATTTAATTTACCTTTGTATAAATGGGCTC CTAGTTGGTTTTTGCCAACAGGAGAATGCGGGATGGATACCCCTGTAGTTCCAGAAAATGCTTATAATCATCTTAATGCT TTTCAAAAATTTTTTATAGGAACTCCACCTGATTTTGAAAATGGGCTTTATAGTAATGGTTGGTATTTGATTCCTAGTTT AAAGTTTATGAATATGGCAATCTGCTGTCTTATAGCATTTTTATGTTGTTTTGTCGTGCTTTTTGCAATGTTTATAGCCT ATGTTTTAGATAAAAATAAACCTAATGCTAAAATTTTTGCATTGGTGATTGTTGCTTTGGTTTTGGTGCTTAAATTTATA GGCGAATCAAAAAATCCGAATCAAAATATAGCTAGTTTAAATCAAGTCGTTTTAAGATACTCTTAA
Upstream 100 bases:
>100_bases TTAATGGAAAATATCAAATCGTTCCAAGTGCAATCAACTCTCCAGAGGCTTTGATTGAAATTACTAAAGAACTTAGCAAG CAAAAATGAGTTATATAAAA
Downstream 100 bases:
>100_bases AATACGCAACAAATTATTTTTGTTGCGTATTATTAAAATTTTATTAAGCTATTTTAGGATGTCTTAAATAATTTTAAAGG ATTGATCATGAGACTTATCA
Product: disulfide oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MKDNCRNFSLSKWQDTRKPWLILIIVTIGLTCIAHFLFQEYLFMKPCEQCVYIRFDMLVMAIGGMIALINPANNIIKIFS YSLAFYGIWLGLEHCLTLNHIHEVVHSENPFAGVDGCREIPIYPFNLPLYKWAPSWFLPTGECGMDTPVVPENAYNHLNA FQKFFIGTPPDFENGLYSNGWYLIPSLKFMNMAICCLIAFLCCFVVLFAMFIAYVLDKNKPNAKIFALVIVALVLVLKFI GESKNPNQNIASLNQVVLRYS
Sequences:
>Translated_261_residues MKDNCRNFSLSKWQDTRKPWLILIIVTIGLTCIAHFLFQEYLFMKPCEQCVYIRFDMLVMAIGGMIALINPANNIIKIFS YSLAFYGIWLGLEHCLTLNHIHEVVHSENPFAGVDGCREIPIYPFNLPLYKWAPSWFLPTGECGMDTPVVPENAYNHLNA FQKFFIGTPPDFENGLYSNGWYLIPSLKFMNMAICCLIAFLCCFVVLFAMFIAYVLDKNKPNAKIFALVIVALVLVLKFI GESKNPNQNIASLNQVVLRYS >Mature_261_residues MKDNCRNFSLSKWQDTRKPWLILIIVTIGLTCIAHFLFQEYLFMKPCEQCVYIRFDMLVMAIGGMIALINPANNIIKIFS YSLAFYGIWLGLEHCLTLNHIHEVVHSENPFAGVDGCREIPIYPFNLPLYKWAPSWFLPTGECGMDTPVVPENAYNHLNA FQKFFIGTPPDFENGLYSNGWYLIPSLKFMNMAICCLIAFLCCFVVLFAMFIAYVLDKNKPNAKIFALVIVALVLVLKFI GESKNPNQNIASLNQVVLRYS
Specific function: May be required for disulfide bond formation in some proteins (Potential) [H]
COG id: COG1495
COG function: function code O; Disulfide bond formation protein DsbB
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DsbB family. DsbI subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003752 [H]
Pfam domain/function: PF02600 DsbB [H]
EC number: NA
Molecular weight: Translated: 29833; Mature: 29833
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDNCRNFSLSKWQDTRKPWLILIIVTIGLTCIAHFLFQEYLFMKPCEQCVYIRFDMLVM CCCCCCCCCCHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIGGMIALINPANNIIKIFSYSLAFYGIWLGLEHCLTLNHIHEVVHSENPFAGVDGCREI HHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC PIYPFNLPLYKWAPSWFLPTGECGMDTPVVPENAYNHLNAFQKFFIGTPPDFENGLYSNG CEEECCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC WYLIPSLKFMNMAICCLIAFLCCFVVLFAMFIAYVLDKNKPNAKIFALVIVALVLVLKFI EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH GESKNPNQNIASLNQVVLRYS CCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MKDNCRNFSLSKWQDTRKPWLILIIVTIGLTCIAHFLFQEYLFMKPCEQCVYIRFDMLVM CCCCCCCCCCHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIGGMIALINPANNIIKIFSYSLAFYGIWLGLEHCLTLNHIHEVVHSENPFAGVDGCREI HHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC PIYPFNLPLYKWAPSWFLPTGECGMDTPVVPENAYNHLNAFQKFFIGTPPDFENGLYSNG CEEECCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC WYLIPSLKFMNMAICCLIAFLCCFVVLFAMFIAYVLDKNKPNAKIFALVIVALVLVLKFI EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH GESKNPNQNIASLNQVVLRYS CCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8655516 [H]