Definition Campylobacter jejuni RM1221, complete genome.
Accession NC_003912
Length 1,777,831

Click here to switch to the map view.

The map label for this gene is dsbB [C]

Identifier: 57237706

GI number: 57237706

Start: 889447

End: 890232

Strand: Direct

Name: dsbB [C]

Synonym: CJE0952

Alternate gene names: 57237706

Gene position: 889447-890232 (Clockwise)

Preceding gene: 57237705

Following gene: 57237707

Centisome position: 50.03

GC content: 31.17

Gene sequence:

>786_bases
ATGAAAGATAATTGCAGAAATTTTTCACTTTCCAAATGGCAAGATACGCGCAAACCTTGGTTGATTTTGATTATAGTTAC
TATAGGGCTTACTTGTATAGCACATTTTTTATTTCAAGAATATCTTTTTATGAAACCTTGTGAACAATGTGTGTATATAA
GATTTGATATGCTTGTTATGGCTATAGGTGGTATGATTGCATTAATCAACCCTGCAAATAATATTATAAAAATTTTTTCT
TATAGCTTAGCTTTTTATGGAATTTGGCTTGGCTTGGAGCATTGTCTAACTTTAAATCATATCCATGAAGTGGTTCATTC
TGAAAATCCTTTTGCAGGCGTAGATGGATGTCGTGAAATTCCTATTTATCCATTTAATTTACCTTTGTATAAATGGGCTC
CTAGTTGGTTTTTGCCAACAGGAGAATGCGGGATGGATACCCCTGTAGTTCCAGAAAATGCTTATAATCATCTTAATGCT
TTTCAAAAATTTTTTATAGGAACTCCACCTGATTTTGAAAATGGGCTTTATAGTAATGGTTGGTATTTGATTCCTAGTTT
AAAGTTTATGAATATGGCAATCTGCTGTCTTATAGCATTTTTATGTTGTTTTGTCGTGCTTTTTGCAATGTTTATAGCCT
ATGTTTTAGATAAAAATAAACCTAATGCTAAAATTTTTGCATTGGTGATTGTTGCTTTGGTTTTGGTGCTTAAATTTATA
GGCGAATCAAAAAATCCGAATCAAAATATAGCTAGTTTAAATCAAGTCGTTTTAAGATACTCTTAA

Upstream 100 bases:

>100_bases
TTAATGGAAAATATCAAATCGTTCCAAGTGCAATCAACTCTCCAGAGGCTTTGATTGAAATTACTAAAGAACTTAGCAAG
CAAAAATGAGTTATATAAAA

Downstream 100 bases:

>100_bases
AATACGCAACAAATTATTTTTGTTGCGTATTATTAAAATTTTATTAAGCTATTTTAGGATGTCTTAAATAATTTTAAAGG
ATTGATCATGAGACTTATCA

Product: disulfide oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MKDNCRNFSLSKWQDTRKPWLILIIVTIGLTCIAHFLFQEYLFMKPCEQCVYIRFDMLVMAIGGMIALINPANNIIKIFS
YSLAFYGIWLGLEHCLTLNHIHEVVHSENPFAGVDGCREIPIYPFNLPLYKWAPSWFLPTGECGMDTPVVPENAYNHLNA
FQKFFIGTPPDFENGLYSNGWYLIPSLKFMNMAICCLIAFLCCFVVLFAMFIAYVLDKNKPNAKIFALVIVALVLVLKFI
GESKNPNQNIASLNQVVLRYS

Sequences:

>Translated_261_residues
MKDNCRNFSLSKWQDTRKPWLILIIVTIGLTCIAHFLFQEYLFMKPCEQCVYIRFDMLVMAIGGMIALINPANNIIKIFS
YSLAFYGIWLGLEHCLTLNHIHEVVHSENPFAGVDGCREIPIYPFNLPLYKWAPSWFLPTGECGMDTPVVPENAYNHLNA
FQKFFIGTPPDFENGLYSNGWYLIPSLKFMNMAICCLIAFLCCFVVLFAMFIAYVLDKNKPNAKIFALVIVALVLVLKFI
GESKNPNQNIASLNQVVLRYS
>Mature_261_residues
MKDNCRNFSLSKWQDTRKPWLILIIVTIGLTCIAHFLFQEYLFMKPCEQCVYIRFDMLVMAIGGMIALINPANNIIKIFS
YSLAFYGIWLGLEHCLTLNHIHEVVHSENPFAGVDGCREIPIYPFNLPLYKWAPSWFLPTGECGMDTPVVPENAYNHLNA
FQKFFIGTPPDFENGLYSNGWYLIPSLKFMNMAICCLIAFLCCFVVLFAMFIAYVLDKNKPNAKIFALVIVALVLVLKFI
GESKNPNQNIASLNQVVLRYS

Specific function: May be required for disulfide bond formation in some proteins (Potential) [H]

COG id: COG1495

COG function: function code O; Disulfide bond formation protein DsbB

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DsbB family. DsbI subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003752 [H]

Pfam domain/function: PF02600 DsbB [H]

EC number: NA

Molecular weight: Translated: 29833; Mature: 29833

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKDNCRNFSLSKWQDTRKPWLILIIVTIGLTCIAHFLFQEYLFMKPCEQCVYIRFDMLVM
CCCCCCCCCCHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIGGMIALINPANNIIKIFSYSLAFYGIWLGLEHCLTLNHIHEVVHSENPFAGVDGCREI
HHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PIYPFNLPLYKWAPSWFLPTGECGMDTPVVPENAYNHLNAFQKFFIGTPPDFENGLYSNG
CEEECCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
WYLIPSLKFMNMAICCLIAFLCCFVVLFAMFIAYVLDKNKPNAKIFALVIVALVLVLKFI
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
GESKNPNQNIASLNQVVLRYS
CCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8655516 [H]