| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237659
Identifier: 57237659
GI number: 57237659
Start: 843750
End: 844997
Strand: Direct
Name: 57237659
Synonym: CJE0905
Alternate gene names: NA
Gene position: 843750-844997 (Clockwise)
Preceding gene: 57237658
Following gene: 57237660
Centisome position: 47.46
GC content: 30.37
Gene sequence:
>1248_bases ATGAGTATCTTTAGCATCAATGATAACTCAAACTATGGTTCTATACTTTCACAAGCAAAAGCTAATAAAGAAAGTAAAGA AAATTCTAAAATAAGTTTTACTAATGCTTTTTTAAAACAAAATGCTAGTAAATTAAATGAAATTCAAAATGCAAATTCAC AAACTCTAGCAAGAAGTGAAGTATTAAATTCTACTAATACAACAAATACCAGCAATAATACTAATTTTAGTATAAGTAGT AAGACAAGTTCTCCTAACTATGATATATCAAGTGAATTTAAAAACTCTATTTATACTCTAAAATATAAACAAACAGATTT AAGCACTGATACAGCCTATGGTTATAGTGTAGATAAAGATGGTTATATGGGAAGTGATTTTAACAAAGCCGCAGGATTAC CTGAAGATTTTAAGATACATAAATCTACTTTGGATGAGATAGAGAGATTTAATCAACATAATATGGCTAGTGAAACCAGT GGAAACTATTATGATAGTTTTGATATGGCTTCTATTGTTAAATCCTATTATAATAGCTTTAATCAAGTAATAAGTGCATT TCCAAATGATAAAACAAGTTTTAGCGAAGCTGATTTAGAGCAATTACCAAAAGGACTAAATGATGGTTGCAATGAAAACA AAGAATATATTGTAACACATATATTTAACGCAGAACAATTTCACGAAGCACAAGCGATTAAGTATTCTACTATGAATTTG GGTATGAACCTTATGAAACTTGACTTTTCTCCACAAAGCATGGAGCAAGGACCTTCAAATGAAGGTGAATTTAATCCTGA TATGTCAGTTTATCCACAAAATGAAGATGGAAGTTATTCTAAAGAAGCTTTATTTATGAGTTTTTTAAAGTCTTATTCGC CTATTCCATCTCCAAATCAAGTTGTTTTTAGTCCTGAAGCAAAAGTTTTAGAAGCAAAATTTGAGCAAGAAATGAAAGCA AATCCTTCTTTCGATGTTTCACTAGATGACATTATGACAGGCAAAGTTGATTTTGCAAGTTTGTTAAAAGGTTATGCACA AGATGGCTGGCTTGATGCAGATATATATGCAATGGAAAAAGGAGTTGCTTGGCAAAATACAAGTATAGGCTATGGTGGAG CTTGGTTTGATAATCAGTTTAATCAAGCAAAGGCTAATGGCTGGAAAGCAAGCAGTGAAAGTATAAATTCTTATGTTGGT TCTATAATGGATAGATTAAATAATCTTATAGGACAAACTAGGGTTTAG
Upstream 100 bases:
>100_bases ATTTAGAAAAATAACTCCACCCCAAAACGGAACAGATTTTGCTTATATTATTTTAATATATTTAGATTGAAGGCAGAAAA ATCTAAATCAAGGAATTAAT
Downstream 100 bases:
>100_bases AAGTTTTAATTTTTTAAGTTTGAAATAAATTGCTAATAACAAAATAAGATAAAATTAGTATAATTTTTTTACAAAAAATT TTGAAAGGAAATTATGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 415; Mature: 414
Protein sequence:
>415_residues MSIFSINDNSNYGSILSQAKANKESKENSKISFTNAFLKQNASKLNEIQNANSQTLARSEVLNSTNTTNTSNNTNFSISS KTSSPNYDISSEFKNSIYTLKYKQTDLSTDTAYGYSVDKDGYMGSDFNKAAGLPEDFKIHKSTLDEIERFNQHNMASETS GNYYDSFDMASIVKSYYNSFNQVISAFPNDKTSFSEADLEQLPKGLNDGCNENKEYIVTHIFNAEQFHEAQAIKYSTMNL GMNLMKLDFSPQSMEQGPSNEGEFNPDMSVYPQNEDGSYSKEALFMSFLKSYSPIPSPNQVVFSPEAKVLEAKFEQEMKA NPSFDVSLDDIMTGKVDFASLLKGYAQDGWLDADIYAMEKGVAWQNTSIGYGGAWFDNQFNQAKANGWKASSESINSYVG SIMDRLNNLIGQTRV
Sequences:
>Translated_415_residues MSIFSINDNSNYGSILSQAKANKESKENSKISFTNAFLKQNASKLNEIQNANSQTLARSEVLNSTNTTNTSNNTNFSISS KTSSPNYDISSEFKNSIYTLKYKQTDLSTDTAYGYSVDKDGYMGSDFNKAAGLPEDFKIHKSTLDEIERFNQHNMASETS GNYYDSFDMASIVKSYYNSFNQVISAFPNDKTSFSEADLEQLPKGLNDGCNENKEYIVTHIFNAEQFHEAQAIKYSTMNL GMNLMKLDFSPQSMEQGPSNEGEFNPDMSVYPQNEDGSYSKEALFMSFLKSYSPIPSPNQVVFSPEAKVLEAKFEQEMKA NPSFDVSLDDIMTGKVDFASLLKGYAQDGWLDADIYAMEKGVAWQNTSIGYGGAWFDNQFNQAKANGWKASSESINSYVG SIMDRLNNLIGQTRV >Mature_414_residues SIFSINDNSNYGSILSQAKANKESKENSKISFTNAFLKQNASKLNEIQNANSQTLARSEVLNSTNTTNTSNNTNFSISSK TSSPNYDISSEFKNSIYTLKYKQTDLSTDTAYGYSVDKDGYMGSDFNKAAGLPEDFKIHKSTLDEIERFNQHNMASETSG NYYDSFDMASIVKSYYNSFNQVISAFPNDKTSFSEADLEQLPKGLNDGCNENKEYIVTHIFNAEQFHEAQAIKYSTMNLG MNLMKLDFSPQSMEQGPSNEGEFNPDMSVYPQNEDGSYSKEALFMSFLKSYSPIPSPNQVVFSPEAKVLEAKFEQEMKAN PSFDVSLDDIMTGKVDFASLLKGYAQDGWLDADIYAMEKGVAWQNTSIGYGGAWFDNQFNQAKANGWKASSESINSYVGS IMDRLNNLIGQTRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46319; Mature: 46188
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIFSINDNSNYGSILSQAKANKESKENSKISFTNAFLKQNASKLNEIQNANSQTLARSE CEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHH VLNSTNTTNTSNNTNFSISSKTSSPNYDISSEFKNSIYTLKYKQTDLSTDTAYGYSVDKD HHCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHCCCEEEEEEECCCCCCCCCCCCCCCCC GYMGSDFNKAAGLPEDFKIHKSTLDEIERFNQHNMASETSGNYYDSFDMASIVKSYYNSF CCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH NQVISAFPNDKTSFSEADLEQLPKGLNDGCNENKEYIVTHIFNAEQFHEAQAIKYSTMNL HHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECHHHHHHHHHHEEEHHHC GMNLMKLDFSPQSMEQGPSNEGEFNPDMSVYPQNEDGSYSKEALFMSFLKSYSPIPSPNQ CCEEEEECCCHHHHHCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCE VVFSPEAKVLEAKFEQEMKANPSFDVSLDDIMTGKVDFASLLKGYAQDGWLDADIYAMEK EEECCCHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHC GVAWQNTSIGYGGAWFDNQFNQAKANGWKASSESINSYVGSIMDRLNNLIGQTRV CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SIFSINDNSNYGSILSQAKANKESKENSKISFTNAFLKQNASKLNEIQNANSQTLARSE EEEEECCCCCHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHH VLNSTNTTNTSNNTNFSISSKTSSPNYDISSEFKNSIYTLKYKQTDLSTDTAYGYSVDKD HHCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHCCCEEEEEEECCCCCCCCCCCCCCCCC GYMGSDFNKAAGLPEDFKIHKSTLDEIERFNQHNMASETSGNYYDSFDMASIVKSYYNSF CCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH NQVISAFPNDKTSFSEADLEQLPKGLNDGCNENKEYIVTHIFNAEQFHEAQAIKYSTMNL HHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECHHHHHHHHHHEEEHHHC GMNLMKLDFSPQSMEQGPSNEGEFNPDMSVYPQNEDGSYSKEALFMSFLKSYSPIPSPNQ CCEEEEECCCHHHHHCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCE VVFSPEAKVLEAKFEQEMKANPSFDVSLDDIMTGKVDFASLLKGYAQDGWLDADIYAMEK EEECCCHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHC GVAWQNTSIGYGGAWFDNQFNQAKANGWKASSESINSYVGSIMDRLNNLIGQTRV CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA