| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
Click here to switch to the map view.
The map label for this gene is thrC [H]
Identifier: 57237657
GI number: 57237657
Start: 841535
End: 842947
Strand: Direct
Name: thrC [H]
Synonym: CJE0903
Alternate gene names: 57237657
Gene position: 841535-842947 (Clockwise)
Preceding gene: 57237656
Following gene: 57237658
Centisome position: 47.33
GC content: 30.71
Gene sequence:
>1413_bases ATGAAATTAGTCGAGAGTAGAAATGTAAATAATGTATCAAGTTTTAAGGAAGCTTTGATTAACCCAAACGCCCCAGAAGG AGGGCTTTACTCGCCTTTAAATTTGCCTATTTTTGAAGGAGAAAAATATGCCAATTTGTCTTATAAAGATTTTGCTTTAA AGCTTATAGAAAGTTTTGGTTTTGGCGAAGAAGAGCTTTTTAAAAAGGCTTTGAAAAGTTACGAAAGCTTTGATGATAAA AATACACCTATTTCTTTGCAAAAAATCTCTGAAAAAACCTATATTAACGAGCTTTGGCATGGGCCTACAAGAGCTTTTAA AGATATGGCTTTACAGCCTTTTGGCGTGCTTTTAAGCGAATTTTCAAAGGATAAAAATATTTTAATTATTTGTGCTACGA GCGGCGATACAGGACCTGCAACCCTAAAAAGCTTTGAAAATGCAAAAAATGTTAAAGTAGCTTGTATGTATCCAAAAGGT GGCACAAGTGGAGTTCAAGAGTTGCAAATGCGAGCTTTAGATAAGGATAATTTGAAAGTTTTTGCTATAGATGAGGATTT TGACGCAGCGCAACGCACTTTAAAAGAATTGCTTTTTTCAAAAGATTTTCAAAACAAAATTAAAGCTTTAAATTATGAGC TTTGCGCAGCGAATTCTGTAAATTTTGGGCGTATTTTATTTCAGATTATTTATCATTATTATGCGAGTTTAAAACTTTTT AATGAGTTTTTAGAAGAAGTACAAATCATTGTTCCAAGTGGAAATTTTGGCAATGCTTTAGGAGCTTTTTATGCTAAAAA AATGGGAGCTAAAATTTCAAAAATCAAAATCGCTTCAAATGTGAATAATATTTTGAGTGAATTTTTTAATCATGGCGTTT ATGATTTGCGTGAAAAAAGTCTTAAGAAGACTATTTCTCCAGCTATGGATATACTTATTTCATCTAATATCGAAAGACTT TTGTTTGCGAAATTTAAAGATAAAAGAACCAAAGAACTGATGAATTTGTTGAAAAATGAGAGATATTTTAAACTTGAAAA AGAAGAATTGCAAAGTTTACAAGAAGATTTTGAGGCGGATTTTTGCACCGATGAAGAATGTATGCAATTTATCAAACAAA GCAAGATTTTAATCGATCCGCACACCGCAACTTGTTTTAAAATGCTTGATCCTTTAAAACCTAGCATTATTACCTCTACA GCAGAATGGACAAAATTTACTCCAAGTATGATAAAAGCTTTATACGATAGGGATTCTAAGAATGAAAAAGAAGATTTAAA ATTTATAGCTAAAGAGTTTAATGTCCAAGTTAAAGATGAAATTTTGGCTTTATTTGACTTGAAAAATAGCGATGAAAAGG TATTTGAAGCCAAAAATATAAAAAAAGAAATTTTAGATTGGATGCAAAAATGA
Upstream 100 bases:
>100_bases TTAAAGATTTTGGTTTTAAATGTCAAATTATAGAATTAAATATAGAATTAAAAGATTCATTAAGGGAAAAAATAAAAACT TATATCAAGGAGTTTGAGCA
Downstream 100 bases:
>100_bases TTATTATCCCTGCAAGATTAAAATCAAGTCGTTTTCATGAGAAAATTTTATGTGATGTAGGTGGAGTGCCTATGTTTGTG GCTACTGCAAGAAGGGTAAG
Product: threonine synthase
Products: NA
Alternate protein names: TS [H]
Number of amino acids: Translated: 470; Mature: 470
Protein sequence:
>470_residues MKLVESRNVNNVSSFKEALINPNAPEGGLYSPLNLPIFEGEKYANLSYKDFALKLIESFGFGEEELFKKALKSYESFDDK NTPISLQKISEKTYINELWHGPTRAFKDMALQPFGVLLSEFSKDKNILIICATSGDTGPATLKSFENAKNVKVACMYPKG GTSGVQELQMRALDKDNLKVFAIDEDFDAAQRTLKELLFSKDFQNKIKALNYELCAANSVNFGRILFQIIYHYYASLKLF NEFLEEVQIIVPSGNFGNALGAFYAKKMGAKISKIKIASNVNNILSEFFNHGVYDLREKSLKKTISPAMDILISSNIERL LFAKFKDKRTKELMNLLKNERYFKLEKEELQSLQEDFEADFCTDEECMQFIKQSKILIDPHTATCFKMLDPLKPSIITST AEWTKFTPSMIKALYDRDSKNEKEDLKFIAKEFNVQVKDEILALFDLKNSDEKVFEAKNIKKEILDWMQK
Sequences:
>Translated_470_residues MKLVESRNVNNVSSFKEALINPNAPEGGLYSPLNLPIFEGEKYANLSYKDFALKLIESFGFGEEELFKKALKSYESFDDK NTPISLQKISEKTYINELWHGPTRAFKDMALQPFGVLLSEFSKDKNILIICATSGDTGPATLKSFENAKNVKVACMYPKG GTSGVQELQMRALDKDNLKVFAIDEDFDAAQRTLKELLFSKDFQNKIKALNYELCAANSVNFGRILFQIIYHYYASLKLF NEFLEEVQIIVPSGNFGNALGAFYAKKMGAKISKIKIASNVNNILSEFFNHGVYDLREKSLKKTISPAMDILISSNIERL LFAKFKDKRTKELMNLLKNERYFKLEKEELQSLQEDFEADFCTDEECMQFIKQSKILIDPHTATCFKMLDPLKPSIITST AEWTKFTPSMIKALYDRDSKNEKEDLKFIAKEFNVQVKDEILALFDLKNSDEKVFEAKNIKKEILDWMQK >Mature_470_residues MKLVESRNVNNVSSFKEALINPNAPEGGLYSPLNLPIFEGEKYANLSYKDFALKLIESFGFGEEELFKKALKSYESFDDK NTPISLQKISEKTYINELWHGPTRAFKDMALQPFGVLLSEFSKDKNILIICATSGDTGPATLKSFENAKNVKVACMYPKG GTSGVQELQMRALDKDNLKVFAIDEDFDAAQRTLKELLFSKDFQNKIKALNYELCAANSVNFGRILFQIIYHYYASLKLF NEFLEEVQIIVPSGNFGNALGAFYAKKMGAKISKIKIASNVNNILSEFFNHGVYDLREKSLKKTISPAMDILISSNIERL LFAKFKDKRTKELMNLLKNERYFKLEKEELQSLQEDFEADFCTDEECMQFIKQSKILIDPHTATCFKMLDPLKPSIITST AEWTKFTPSMIKALYDRDSKNEKEDLKFIAKEFNVQVKDEILALFDLKNSDEKVFEAKNIKKEILDWMQK
Specific function: Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine [H]
COG id: COG0498
COG function: function code E; Threonine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the threonine synthase family [H]
Homologues:
Organism=Homo sapiens, GI153792148, Length=429, Percent_Identity=34.965034965035, Blast_Score=238, Evalue=6e-63, Organism=Homo sapiens, GI149193323, Length=440, Percent_Identity=29.0909090909091, Blast_Score=181, Evalue=1e-45, Organism=Escherichia coli, GI1786185, Length=422, Percent_Identity=29.8578199052133, Blast_Score=151, Evalue=7e-38, Organism=Saccharomyces cerevisiae, GI6319901, Length=414, Percent_Identity=35.024154589372, Blast_Score=221, Evalue=2e-58,
Paralogues:
None
Copy number: 560 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR004450 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =4.2.3.1 [H]
Molecular weight: Translated: 53850; Mature: 53850
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLVESRNVNNVSSFKEALINPNAPEGGLYSPLNLPIFEGEKYANLSYKDFALKLIESFG CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHC FGEEELFKKALKSYESFDDKNTPISLQKISEKTYINELWHGPTRAFKDMALQPFGVLLSE CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHH FSKDKNILIICATSGDTGPATLKSFENAKNVKVACMYPKGGTSGVQELQMRALDKDNLKV HCCCCCEEEEEECCCCCCHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEE FAIDEDFDAAQRTLKELLFSKDFQNKIKALNYELCAANSVNFGRILFQIIYHYYASLKLF EEECCCHHHHHHHHHHHHHCCCHHHHHHHHCHHHCCCCCCHHHHHHHHHHHHHHHHHHHH NEFLEEVQIIVPSGNFGNALGAFYAKKMGAKISKIKIASNVNNILSEFFNHGVYDLREKS HHHHHHHEEEECCCCCCHHHHHHHHHHHCCHHHEEEHHHHHHHHHHHHHHCCHHHHHHHH LKKTISPAMDILISSNIERLLFAKFKDKRTKELMNLLKNERYFKLEKEELQSLQEDFEAD HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHCCC FCTDEECMQFIKQSKILIDPHTATCFKMLDPLKPSIITSTAEWTKFTPSMIKALYDRDSK CCCCHHHHHHHHHCCEEECCCHHHHHHHHCCCCCHHCCCCHHHHHCCHHHHHHHHCCCCC NEKEDLKFIAKEFNVQVKDEILALFDLKNSDEKVFEAKNIKKEILDWMQK CHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKLVESRNVNNVSSFKEALINPNAPEGGLYSPLNLPIFEGEKYANLSYKDFALKLIESFG CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHC FGEEELFKKALKSYESFDDKNTPISLQKISEKTYINELWHGPTRAFKDMALQPFGVLLSE CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHH FSKDKNILIICATSGDTGPATLKSFENAKNVKVACMYPKGGTSGVQELQMRALDKDNLKV HCCCCCEEEEEECCCCCCHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEE FAIDEDFDAAQRTLKELLFSKDFQNKIKALNYELCAANSVNFGRILFQIIYHYYASLKLF EEECCCHHHHHHHHHHHHHCCCHHHHHHHHCHHHCCCCCCHHHHHHHHHHHHHHHHHHHH NEFLEEVQIIVPSGNFGNALGAFYAKKMGAKISKIKIASNVNNILSEFFNHGVYDLREKS HHHHHHHEEEECCCCCCHHHHHHHHHHHCCHHHEEEHHHHHHHHHHHHHHCCHHHHHHHH LKKTISPAMDILISSNIERLLFAKFKDKRTKELMNLLKNERYFKLEKEELQSLQEDFEAD HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHCCC FCTDEECMQFIKQSKILIDPHTATCFKMLDPLKPSIITSTAEWTKFTPSMIKALYDRDSK CCCCHHHHHHHHHCCEEECCCHHHHHHHHCCCCCHHCCCCHHHHHCCHHHHHHHHCCCCC NEKEDLKFIAKEFNVQVKDEILALFDLKNSDEKVFEAKNIKKEILDWMQK CHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]