| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237039
Identifier: 57237039
GI number: 57237039
Start: 771027
End: 771983
Strand: Direct
Name: 57237039
Synonym: CJE0838
Alternate gene names: NA
Gene position: 771027-771983 (Clockwise)
Preceding gene: 57237038
Following gene: 57237040
Centisome position: 43.37
GC content: 29.05
Gene sequence:
>957_bases TTGGGTAATTCTAGTAGTAAATTTAGTTTTGATGATAGTAGTAAAGTTAAAAACTGGACTAAATATGGAAGTATTGCGGA TGCAACAGAATGGAATAAATTTGCTGATTTTTGGAATGTAAATAAAGAAAAATTTAGAACAGCTTTTGATCATTTTCGTT TGATTGATGATATTGATTTTAGTGGCGTGAAAACATACATAGTAGGTGATAATACAAGCAATGCTTTTGCTAAATCTTTC GATGGTTCTGGTTATGCTTTAAAAAATGTTAATATTAATTCATCAAATCAATATGTAGGAATTTTTGGAGTTGTTCAAAA TAGCTATATAAGAAACCTTAATATTCAAGGATTGAAAATTGCTTCAACTGGTTATGATGCTTATGTTGGAGGTATAGTAG GGCAAAATATTGCAAACAGTTATACGGGTTTTGAAAATGTGACTGTTAATGATCTCGTTATTAATACAGCTGTAAATACT AAAGTTGGCGGAATAATAGGCTGGGGAAATGGTAGTGGAGGGAATAACACTATCAATTTTACAAATGTTGCTATTAATAA TATAAGTATAGTAGCAAAAAAAGGTTCTTATGTGGGTGGCATAGGCAGACAAATTGATGGTGGTAATTTTAATAATGTTG TGGTTAATGACATAGAAAAACTTATAACTTCTGGGAATGATAGTAAAACAGGAGGATTTACTGGAAAAGTTGGAAATTTA AAGATTAATAATGCTTACTTATTTTATAAAAATGGAGCAATTTTGAGTGCTGGAAACTATAAAACACAAGCTGGAAAAGT TATTGGTGATCCTGGAATTAGTGTAAATAATAATTTTAGTAATATTTATGTTTATCATAATTTAGAAAATGGTTACATTG ATGAAGGACAGAATTTTTTTAAGTCTGTGCAATATAATAATGAAGTAACAGGAAAAAAGATTTTGATAGCGCTGTAA
Upstream 100 bases:
>100_bases TGCTGGAGTGGTAAAAGATACAAAAAATATCGTAGCCAAAGCAGAGCAAGAAGTTATCATTCAACAAAGCATAACAAGTT TTGAAGAAGATGGAGCTTTA
Downstream 100 bases:
>100_bases GAAAGAAATTTAACGATATAAAATATCTTGATAATAATTCTTATGCTTTTGCTGATTCTTTTACCAAGGTAACAGATGCT GTGAAATTATCCAAAGACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MGNSSSKFSFDDSSKVKNWTKYGSIADATEWNKFADFWNVNKEKFRTAFDHFRLIDDIDFSGVKTYIVGDNTSNAFAKSF DGSGYALKNVNINSSNQYVGIFGVVQNSYIRNLNIQGLKIASTGYDAYVGGIVGQNIANSYTGFENVTVNDLVINTAVNT KVGGIIGWGNGSGGNNTINFTNVAINNISIVAKKGSYVGGIGRQIDGGNFNNVVVNDIEKLITSGNDSKTGGFTGKVGNL KINNAYLFYKNGAILSAGNYKTQAGKVIGDPGISVNNNFSNIYVYHNLENGYIDEGQNFFKSVQYNNEVTGKKILIAL
Sequences:
>Translated_318_residues MGNSSSKFSFDDSSKVKNWTKYGSIADATEWNKFADFWNVNKEKFRTAFDHFRLIDDIDFSGVKTYIVGDNTSNAFAKSF DGSGYALKNVNINSSNQYVGIFGVVQNSYIRNLNIQGLKIASTGYDAYVGGIVGQNIANSYTGFENVTVNDLVINTAVNT KVGGIIGWGNGSGGNNTINFTNVAINNISIVAKKGSYVGGIGRQIDGGNFNNVVVNDIEKLITSGNDSKTGGFTGKVGNL KINNAYLFYKNGAILSAGNYKTQAGKVIGDPGISVNNNFSNIYVYHNLENGYIDEGQNFFKSVQYNNEVTGKKILIAL >Mature_317_residues GNSSSKFSFDDSSKVKNWTKYGSIADATEWNKFADFWNVNKEKFRTAFDHFRLIDDIDFSGVKTYIVGDNTSNAFAKSFD GSGYALKNVNINSSNQYVGIFGVVQNSYIRNLNIQGLKIASTGYDAYVGGIVGQNIANSYTGFENVTVNDLVINTAVNTK VGGIIGWGNGSGGNNTINFTNVAINNISIVAKKGSYVGGIGRQIDGGNFNNVVVNDIEKLITSGNDSKTGGFTGKVGNLK INNAYLFYKNGAILSAGNYKTQAGKVIGDPGISVNNNFSNIYVYHNLENGYIDEGQNFFKSVQYNNEVTGKKILIAL
Specific function: Unknown
COG id: COG3210
COG function: function code U; Large exoproteins involved in heme utilization or adhesion
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34394; Mature: 34263
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNSSSKFSFDDSSKVKNWTKYGSIADATEWNKFADFWNVNKEKFRTAFDHFRLIDDIDF CCCCCCCCCCCCCHHHCCHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHEECCCCC SGVKTYIVGDNTSNAFAKSFDGSGYALKNVNINSSNQYVGIFGVVQNSYIRNLNIQGLKI CCEEEEEEECCCCCHHHHCCCCCCEEEEEEEECCCCCEEEEEEEEECCEEECCCCCEEEE ASTGYDAYVGGIVGQNIANSYTGFENVTVNDLVINTAVNTKVGGIIGWGNGSGGNNTINF ECCCCCCEECCHHHCCHHHCCCCCCCEEEEEEEEEEECCCCCCEEEECCCCCCCCCEEEE TNVAINNISIVAKKGSYVGGIGRQIDGGNFNNVVVNDIEKLITSGNDSKTGGFTGKVGNL EEEEEEEEEEEEECCCEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCE KINNAYLFYKNGAILSAGNYKTQAGKVIGDPGISVNNNFSNIYVYHNLENGYIDEGQNFF EECCEEEEEECCEEEECCCCCCCCCEEECCCCCEECCCCCEEEEEECCCCCCCCCCHHHH KSVQYNNEVTGKKILIAL HHHCCCCCCCCCEEEEEC >Mature Secondary Structure GNSSSKFSFDDSSKVKNWTKYGSIADATEWNKFADFWNVNKEKFRTAFDHFRLIDDIDF CCCCCCCCCCCCHHHCCHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHEECCCCC SGVKTYIVGDNTSNAFAKSFDGSGYALKNVNINSSNQYVGIFGVVQNSYIRNLNIQGLKI CCEEEEEEECCCCCHHHHCCCCCCEEEEEEEECCCCCEEEEEEEEECCEEECCCCCEEEE ASTGYDAYVGGIVGQNIANSYTGFENVTVNDLVINTAVNTKVGGIIGWGNGSGGNNTINF ECCCCCCEECCHHHCCHHHCCCCCCCEEEEEEEEEEECCCCCCEEEECCCCCCCCCEEEE TNVAINNISIVAKKGSYVGGIGRQIDGGNFNNVVVNDIEKLITSGNDSKTGGFTGKVGNL EEEEEEEEEEEEECCCEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCE KINNAYLFYKNGAILSAGNYKTQAGKVIGDPGISVNNNFSNIYVYHNLENGYIDEGQNFF EECCEEEEEECCEEEECCCCCCCCCEEECCCCCEECCCCCEEEEEECCCCCCCCCCHHHH KSVQYNNEVTGKKILIAL HHHCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA