| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237035
Identifier: 57237035
GI number: 57237035
Start: 766004
End: 766642
Strand: Direct
Name: 57237035
Synonym: CJE0833
Alternate gene names: NA
Gene position: 766004-766642 (Clockwise)
Preceding gene: 57237034
Following gene: 57237037
Centisome position: 43.09
GC content: 27.23
Gene sequence:
>639_bases ATGAAGCTTGTTTTATTTGATTTAGATGATACTTTAATACAAGGCGATAGTGCTAAACTTTGGCTTAAATTTTGTGTTGA AAAAGGTTTTTTACCTCAAGAATATTTAGAAAAAATCGTTTTTTATCAAAAACAATATCAAGAAAAAAAGCTTGATATGG ATGAATTTATGACTTTTTTTCTTCAAAGTGTTAAGGGTAAAAATGAAGATAGAATTTCATCTTTAGTAGATGAATTTATA AAAATTTATATAAAACCTTATGAAAAAGCTAAAGAACTTATAATCAAATATCAAGATCAAAGGTGTATTATAATTTCAGC TACGGCTGAATTTTTAGTTAGAAAAATCGCCTCTTTTTTGGGAGTGAGAGAAAGCATAGCCATAAAATGTGAGCGTGTGG GTGATAAATTTAGCGGAAAAGCTTACGGGATTTATAGCTTTAAGGAAGGCAAGGTTTTAAGACTTAAGGAATATTTGGGT AAAGATTATGAAAAATGGATGAAAGATTCTTATTTTTTTAGTGATTCTATCAATGATTTACCTTTACTAGAGTCTGTTAG CAAAGCCTTTGTATGTAATGGCGATGAAAAAATTTTAAAAATTGCAAAAGAGAGAAAATATGAAATTTTAACTTTTTAA
Upstream 100 bases:
>100_bases AATTTAAGGTAGATACTTTAAATTTTAGCACTCATAGTACTTATGAAGCAGGTGATAAAATCGCTTTAAAATTCAATCTT TCTTTAGCAAAAGAGTTAAA
Downstream 100 bases:
>100_bases GCTATAAGCGTGAAAATTCACGCTTATTCTAATTCATATTTTTTAATTAAAGTATCATAAAATCCATCAGTTTTTGCTTC ATCTATGCCTTTGTTAAATA
Product: HAD family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MKLVLFDLDDTLIQGDSAKLWLKFCVEKGFLPQEYLEKIVFYQKQYQEKKLDMDEFMTFFLQSVKGKNEDRISSLVDEFI KIYIKPYEKAKELIIKYQDQRCIIISATAEFLVRKIASFLGVRESIAIKCERVGDKFSGKAYGIYSFKEGKVLRLKEYLG KDYEKWMKDSYFFSDSINDLPLLESVSKAFVCNGDEKILKIAKERKYEILTF
Sequences:
>Translated_212_residues MKLVLFDLDDTLIQGDSAKLWLKFCVEKGFLPQEYLEKIVFYQKQYQEKKLDMDEFMTFFLQSVKGKNEDRISSLVDEFI KIYIKPYEKAKELIIKYQDQRCIIISATAEFLVRKIASFLGVRESIAIKCERVGDKFSGKAYGIYSFKEGKVLRLKEYLG KDYEKWMKDSYFFSDSINDLPLLESVSKAFVCNGDEKILKIAKERKYEILTF >Mature_212_residues MKLVLFDLDDTLIQGDSAKLWLKFCVEKGFLPQEYLEKIVFYQKQYQEKKLDMDEFMTFFLQSVKGKNEDRISSLVDEFI KIYIKPYEKAKELIIKYQDQRCIIISATAEFLVRKIASFLGVRESIAIKCERVGDKFSGKAYGIYSFKEGKVLRLKEYLG KDYEKWMKDSYFFSDSINDLPLLESVSKAFVCNGDEKILKIAKERKYEILTF
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR006385 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24981; Mature: 24981
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLVLFDLDDTLIQGDSAKLWLKFCVEKGFLPQEYLEKIVFYQKQYQEKKLDMDEFMTFF CEEEEEECCCHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH LQSVKGKNEDRISSLVDEFIKIYIKPYEKAKELIIKYQDQRCIIISATAEFLVRKIASFL HHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHEECCCEEEEEEHHHHHHHHHHHHHH GVRESIAIKCERVGDKFSGKAYGIYSFKEGKVLRLKEYLGKDYEKWMKDSYFFSDSINDL CCHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEHHHHHHCCHHHHHHHHCEEECCCCCCC PLLESVSKAFVCNGDEKILKIAKERKYEILTF HHHHHHHHHHEECCHHHHHHHHHHCCEEECCC >Mature Secondary Structure MKLVLFDLDDTLIQGDSAKLWLKFCVEKGFLPQEYLEKIVFYQKQYQEKKLDMDEFMTFF CEEEEEECCCHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH LQSVKGKNEDRISSLVDEFIKIYIKPYEKAKELIIKYQDQRCIIISATAEFLVRKIASFL HHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHEECCCEEEEEEHHHHHHHHHHHHHH GVRESIAIKCERVGDKFSGKAYGIYSFKEGKVLRLKEYLGKDYEKWMKDSYFFSDSINDL CCHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEHHHHHHCCHHHHHHHHCEEECCCCCCC PLLESVSKAFVCNGDEKILKIAKERKYEILTF HHHHHHHHHHEECCHHHHHHHHHHCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]