Definition | Thermus thermophilus HB8 chromosome, complete genome. |
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Accession | NC_006461 |
Length | 1,849,742 |
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The map label for this gene is 55980887
Identifier: 55980887
GI number: 55980887
Start: 872685
End: 872912
Strand: Reverse
Name: 55980887
Synonym: TTHA0918
Alternate gene names: NA
Gene position: 872912-872685 (Counterclockwise)
Preceding gene: 55980888
Following gene: 55980886
Centisome position: 47.19
GC content: 58.77
Gene sequence:
>228_bases GTGGGCCTCCTCCTGCTTAGGTCGCAATCCCCTTACGGGGCTCAATCCCTTGCAACATTGAACTTCTCCGGCAGGTGGGC GTGCCCATTCCTGAAGGTCGCAATCCCCTTACGGGGCTCAATCCCTTGCAACGTGGCGAACCTTCACGAACTCCAGAAGG CCCTAGAAGGGCAAAGTCGCAATCCCCTTACGGGGCTCAATCCCTTGCAACCCGTAGCATCGGCGTAG
Upstream 100 bases:
>100_bases CCCGGTAGAGTTCCACTATCCTCTCCGTAGCCTGGTTAGAGATGTCGCAATCCCCTTACGGGGCTCAATCCCTTGCAACT ATTTTGGCCTCTACCAGGCC
Downstream 100 bases:
>100_bases GCGGGGTGGCACCCACGCCAATGGTCGCAATCCCCTTACGGGGCTCAATCCCTTGCAACTCCGACGGCAAGATCATCGGG GTGCGGCGGCTCCTCGCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 75; Mature: 74
Protein sequence:
>75_residues MGLLLLRSQSPYGAQSLATLNFSGRWACPFLKVAIPLRGSIPCNVANLHELQKALEGQSRNPLTGLNPLQPVASA
Sequences:
>Translated_75_residues MGLLLLRSQSPYGAQSLATLNFSGRWACPFLKVAIPLRGSIPCNVANLHELQKALEGQSRNPLTGLNPLQPVASA >Mature_74_residues GLLLLRSQSPYGAQSLATLNFSGRWACPFLKVAIPLRGSIPCNVANLHELQKALEGQSRNPLTGLNPLQPVASA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7997; Mature: 7866
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLLLLRSQSPYGAQSLATLNFSGRWACPFLKVAIPLRGSIPCNVANLHELQKALEGQSR CCEEEEECCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCC NPLTGLNPLQPVASA CCCCCCCCCCCCCCC >Mature Secondary Structure GLLLLRSQSPYGAQSLATLNFSGRWACPFLKVAIPLRGSIPCNVANLHELQKALEGQSR CEEEEECCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCC NPLTGLNPLQPVASA CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA