Definition | Thermus thermophilus HB8 chromosome, complete genome. |
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Accession | NC_006461 |
Length | 1,849,742 |
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The map label for this gene is 55980885
Identifier: 55980885
GI number: 55980885
Start: 872456
End: 872632
Strand: Reverse
Name: 55980885
Synonym: TTHA0916
Alternate gene names: NA
Gene position: 872632-872456 (Counterclockwise)
Preceding gene: 55980886
Following gene: 55980884
Centisome position: 47.18
GC content: 58.76
Gene sequence:
>177_bases TTGCAACTCCGACGGCAAGATCATCGGGGTGCGGCGGCTCCTCGCCGTCGCAATCCCCTTACGGGGCTCAATCCCTTGCA ACGCCAGTCTATGACCAAGCCCCTAGGCTCCTTCACTTTGAAGTGTCGCAATCCCCTTACGGGGCTCAATCCCTTGCAAC ACCTCATGGGGGAGTAA
Upstream 100 bases:
>100_bases AATCCCCTTACGGGGCTCAATCCCTTGCAACCCGTAGCATCGGCGTAGGCGGGGTGGCACCCACGCCAATGGTCGCAATC CCCTTACGGGGCTCAATCCC
Downstream 100 bases:
>100_bases GATAGGCGGGAAAGGAGGGAGGTCGCAATCCCCTTACGGGGCTCAATCCCTTGCAACCACGTGAAGACGTCCCTGGCCTC GGTCGTGAGGGACGTGGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 58; Mature: 58
Protein sequence:
>58_residues MQLRRQDHRGAAAPRRRNPLTGLNPLQRQSMTKPLGSFTLKCRNPLTGLNPLQHLMGE
Sequences:
>Translated_58_residues MQLRRQDHRGAAAPRRRNPLTGLNPLQRQSMTKPLGSFTLKCRNPLTGLNPLQHLMGE >Mature_58_residues MQLRRQDHRGAAAPRRRNPLTGLNPLQRQSMTKPLGSFTLKCRNPLTGLNPLQHLMGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6575; Mature: 6575
Theoretical pI: Translated: 12.51; Mature: 12.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLRRQDHRGAAAPRRRNPLTGLNPLQRQSMTKPLGSFTLKCRNPLTGLNPLQHLMGE CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHCC >Mature Secondary Structure MQLRRQDHRGAAAPRRRNPLTGLNPLQRQSMTKPLGSFTLKCRNPLTGLNPLQHLMGE CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA