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The map label for this gene is amiA [C]

Identifier: 55980870

GI number: 55980870

Start: 862255

End: 863409

Strand: Reverse

Name: amiA [C]

Synonym: TTHA0901

Alternate gene names: 55980870

Gene position: 863409-862255 (Counterclockwise)

Preceding gene: 55980871

Following gene: 55980869

Centisome position: 46.68

GC content: 76.02

Gene sequence:

>1155_bases
ATGAGGGCCCTCTTCCTCCTCTTCCTCGCCGCCTTCGCCCTGGCCCAGGCCCCCAAGCCCCTGAAGGTGGGGGAGCTTAC
CGGGGAAGCCCTCTACCCGGGAAACCGGGGGGTGTCCTACGGGGAGGTGGGGCTCGTGGCCCGGGGGCTCGGCCTCGCCC
TCTGGCAGGGGGAGGGCCAGGTGGCCCTCGGGCTTGGGGCCCGCTACCGGACCTTCCCGGTGGAAGCGGACGAGGCCAAG
GCCGCCTCCAGCCTCGCCGCCTGGCGCAAGGACGGGCGCGTCTACGTGCCCCTGCGCCCCCTAGCGGACGCCCTCGGCCT
CTCCTACCAGGCCCAGGTGGGCATCCAGCTGGACCTCCCCTGGGCCCGGCTCCTCCAGGTGGAGGCCCGGCCCGAAGGCT
ACCTCCTCCGCTTCAGCCGGGAGGTGAACGCCGTGGTGCGGCCCGGGGGCGTCCTCTTCCTCATGGCCCAGGGGAGCCAC
CCCTCCCTGGTCCAGGAGGCCATGGGCCTCTTCCTCCCCCTCTCCCGCCCCCCGGAGCGGGTCTACTACCCCGGGGGCGG
CCAGGTGGCCGTGGGCCTCACCCCCCTCCCCCTCCCCTCCCCCACCGTCCTCCTGGACCCGGGGCACGGCGGGGAGGACC
CGGGCCTCGAGGTCCAGGGGCTGGCGGAGAAGGAGGTCGCCCTGGACCTCGCCCGCCGCGTGGCCGCCCTCCTGCCGGGC
GCCCGGCTCACCCGGCAGGGCGACGAAACCCTGCCCCTGGAGGCGCGCCTCGCCCTGGCCCGCACCGCCTCCGTGGTGGT
CTCCCTCCACATGGCCCGGGGCCGTGAGGTGCGCCTCTACCTTCCCAAGGACCGGACGAGCCCCCTCGCCCAAAGCCTCC
CCCGCCTCGGCGACCTTCCCGAGGAACGGGCGAGGCTCCTTCGGGCCTACGCCGGGGACCCCGCCCGCCTCGCCCTGGCC
CTGGAGCGGGCCCTCGCCGCCCAGGGGTTCGCCGTGGTCAAGGCCGAGGGGCCCTACGCCCTGACCCGGGTGGACGGGGC
GGCGGTGCTTTTGGAGGTGGGGGCGGAAAGGCTGGGAACGGAGGAGGCCCGCGCCCTCGTGGCCCAGGCCATCGCCCAGG
GGATCCGGGCCTACCTCGAGGGGGGCGCGCCGTGA

Upstream 100 bases:

>100_bases
GGTACGCCAAGGTCCTCCTGGGCCTCGCCCGGGGGAAGAAGGCTTATGAAAAGCGGCGCGAGGACAAGAAGGAGGCGGTG
CGCCGCGCCTTGGAGGAGCT

Downstream 100 bases:

>100_bases
GGAAGTACCTGAGCGTCTACAACCTCCTCGGCCTTCTCGTCTTCGCCCTGGGGCTTTTCGTCTACTGGCAAAGCCCCGTC
CCCAACCCCCCCAAGGCCCT

Product: hypothetical protein

Products: Hydrolyzed cell wall glycopeptides; N-acetylmuramoyl residues; L-amino acid residues [C]

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MRALFLLFLAAFALAQAPKPLKVGELTGEALYPGNRGVSYGEVGLVARGLGLALWQGEGQVALGLGARYRTFPVEADEAK
AASSLAAWRKDGRVYVPLRPLADALGLSYQAQVGIQLDLPWARLLQVEARPEGYLLRFSREVNAVVRPGGVLFLMAQGSH
PSLVQEAMGLFLPLSRPPERVYYPGGGQVAVGLTPLPLPSPTVLLDPGHGGEDPGLEVQGLAEKEVALDLARRVAALLPG
ARLTRQGDETLPLEARLALARTASVVVSLHMARGREVRLYLPKDRTSPLAQSLPRLGDLPEERARLLRAYAGDPARLALA
LERALAAQGFAVVKAEGPYALTRVDGAAVLLEVGAERLGTEEARALVAQAIAQGIRAYLEGGAP

Sequences:

>Translated_384_residues
MRALFLLFLAAFALAQAPKPLKVGELTGEALYPGNRGVSYGEVGLVARGLGLALWQGEGQVALGLGARYRTFPVEADEAK
AASSLAAWRKDGRVYVPLRPLADALGLSYQAQVGIQLDLPWARLLQVEARPEGYLLRFSREVNAVVRPGGVLFLMAQGSH
PSLVQEAMGLFLPLSRPPERVYYPGGGQVAVGLTPLPLPSPTVLLDPGHGGEDPGLEVQGLAEKEVALDLARRVAALLPG
ARLTRQGDETLPLEARLALARTASVVVSLHMARGREVRLYLPKDRTSPLAQSLPRLGDLPEERARLLRAYAGDPARLALA
LERALAAQGFAVVKAEGPYALTRVDGAAVLLEVGAERLGTEEARALVAQAIAQGIRAYLEGGAP
>Mature_384_residues
MRALFLLFLAAFALAQAPKPLKVGELTGEALYPGNRGVSYGEVGLVARGLGLALWQGEGQVALGLGARYRTFPVEADEAK
AASSLAAWRKDGRVYVPLRPLADALGLSYQAQVGIQLDLPWARLLQVEARPEGYLLRFSREVNAVVRPGGVLFLMAQGSH
PSLVQEAMGLFLPLSRPPERVYYPGGGQVAVGLTPLPLPSPTVLLDPGHGGEDPGLEVQGLAEKEVALDLARRVAALLPG
ARLTRQGDETLPLEARLALARTASVVVSLHMARGREVRLYLPKDRTSPLAQSLPRLGDLPEERARLLRAYAGDPARLALA
LERALAAQGFAVVKAEGPYALTRVDGAAVLLEVGAERLGTEEARALVAQAIAQGIRAYLEGGAP

Specific function: Unknown

COG id: COG0860

COG function: function code M; N-acetylmuramoyl-L-alanine amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.5.1.28 [C]

Molecular weight: Translated: 40759; Mature: 40759

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRALFLLFLAAFALAQAPKPLKVGELTGEALYPGNRGVSYGEVGLVARGLGLALWQGEGQ
CHHHHHHHHHHHHHHCCCCCCEECCCCCCEECCCCCCCCCCCHHHHHHCCEEEEECCCCC
VALGLGARYRTFPVEADEAKAASSLAAWRKDGRVYVPLRPLADALGLSYQAQVGIQLDLP
EEEEECCEEEECCCCCHHHHHHHHHHHHHHCCEEEEECHHHHHHHCCCEEEEEEEEEECC
WARLLQVEARPEGYLLRFSREVNAVVRPGGVLFLMAQGSHPSLVQEAMGLFLPLSRPPER
HHHHEEEECCCCCEEEEEECCCCEEECCCCEEEEEECCCCCHHHHHHHHHEECCCCCCCE
VYYPGGGQVAVGLTPLPLPSPTVLLDPGHGGEDPGLEVQGLAEKEVALDLARRVAALLPG
EEECCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCC
ARLTRQGDETLPLEARLALARTASVVVSLHMARGREVRLYLPKDRTSPLAQSLPRLGDLP
CHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCCCC
EERARLLRAYAGDPARLALALERALAAQGFAVVKAEGPYALTRVDGAAVLLEVGAERLGT
HHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEEECCCEEEEEECCHHHHHHHCHHHHCH
EEARALVAQAIAQGIRAYLEGGAP
HHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRALFLLFLAAFALAQAPKPLKVGELTGEALYPGNRGVSYGEVGLVARGLGLALWQGEGQ
CHHHHHHHHHHHHHHCCCCCCEECCCCCCEECCCCCCCCCCCHHHHHHCCEEEEECCCCC
VALGLGARYRTFPVEADEAKAASSLAAWRKDGRVYVPLRPLADALGLSYQAQVGIQLDLP
EEEEECCEEEECCCCCHHHHHHHHHHHHHHCCEEEEECHHHHHHHCCCEEEEEEEEEECC
WARLLQVEARPEGYLLRFSREVNAVVRPGGVLFLMAQGSHPSLVQEAMGLFLPLSRPPER
HHHHEEEECCCCCEEEEEECCCCEEECCCCEEEEEECCCCCHHHHHHHHHEECCCCCCCE
VYYPGGGQVAVGLTPLPLPSPTVLLDPGHGGEDPGLEVQGLAEKEVALDLARRVAALLPG
EEECCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCC
ARLTRQGDETLPLEARLALARTASVVVSLHMARGREVRLYLPKDRTSPLAQSLPRLGDLP
CHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCCCC
EERARLLRAYAGDPARLALALERALAAQGFAVVKAEGPYALTRVDGAAVLLEVGAERLGT
HHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEEECCCEEEEEECCHHHHHHHCHHHHCH
EEARALVAQAIAQGIRAYLEGGAP
HHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: cell wall glycopeptides; D-lactyl-L-Ala [C]

Specific reaction: Hydrolyzes the link between N-acetylmuramoyl residues and L-amino acid residues [C]

General reaction: Carboxylic acid amide hydrolysis [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA