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The map label for this gene is rfbD [H]

Identifier: 55980855

GI number: 55980855

Start: 842891

End: 844009

Strand: Reverse

Name: rfbD [H]

Synonym: TTHA0886

Alternate gene names: 55980855

Gene position: 844009-842891 (Counterclockwise)

Preceding gene: 55980856

Following gene: 55980854

Centisome position: 45.63

GC content: 64.88

Gene sequence:

>1119_bases
ATGAAGGTGGACTACCTGATCGTGGGCGCGGGCTTCACCGGGGCCACCCTGGCGGAGAGGCTCGCCGCCGCAGGCAAGCG
GGTTCTGGTGGTGGACAGGAGGGACCACATCGGGGGCAACGCCTACGACGAAATGGACCCCCACGGCGTCCTCGTCCACC
GCTACGGACCCCACATCTTCCACACCAACAGCAAAAAGGTCTTTGACTACCTCTCCCGCTTCACCGAGTGGCGCCCCTAC
TACCACCGCGTCCGCGCCGTGGTGGAGGGCAAGGAGGTTCCCCTCCCCTTTAGCCTCGCCACCCTCCGCGCCCTCTTCTC
CCCAAAGCTCGCCGACCGCCTGGAAGAAAAGCTCATCGCCCGCTTCGGCTACGGCGCCCGCGTCCCCATCCTCCGCCTCC
GGGAAGAAGAAGACCCCGACCTCCGCTTCCTCGCCGACTACGTCTACAAAAACGTCTTTGAAGGCTACACCCTCAAGCAG
TGGGGCCTGCGCCCCGAGGAACTCTCCCCTTCCGTGACCGCTCGGGTCCCCGTCCTGGTGAGCCACGACACCCGTTACTT
CCAGGACGCCTACCAGGCCATGCCCAAGGAGGGCTACACCGCCCTCTTCCGCAGGATGCTCGCCCATCCCAACATCAAGC
TCCTCCTCCAAGCCGATTGGAAGGAGGTGGAAGGGGAGGTCAAGTTTGCGCGCCTCGTCTTCACCGGGCCCATTGACGAG
TTCTTCGGCTACCTCCACGGGCCCCTCCCCTACCGTTCCCTCCGCTTCCGGATGGAACTCCACCCAGGCCCCTGGGCCCA
GGAGGTGGGCACGGTGAACTACCCCAACGAGCACCCCTACACCCGGGTCACGGAGTTCAAGCACCTCACGGGCCAGGACT
ACCTCCCCCACTCCACCCTCTGCTACGAGTACCCCGAGGCCTACGAGCCCGGGAGGAACGAGCCCTACTACCCCGTCCCC
AGGGAGGAGAACGAGGAACGCTACCGGCTCTACCTGGAGGAGGCCAAGAAGCTCAAGGGCGTCTACTTCGCAGGAAGGCT
CGGCGACTACCGCTACTACAACATGGACCAGGCGGTGGCCCGGGCCCTGAAGCTCTTTGAGGAGATCGTCCATGAGTGA

Upstream 100 bases:

>100_bases
AGCTGGGCAAACGGGCGCGGGCCTTCGTGGAAGCGACCCACACCCTGGACCAGGCCGCCCGAAGGCTCGCCGCGACCCTG
AAGCGGCTTTGGGAGGAAGG

Downstream 100 bases:

>100_bases
ACGGGTCTGCGCCGTGATCGTCACCTACAACCGGAAGGCGCTCCTGCGGGAGTGCCTCAAGGCCGTCCTCTCCCAGACCC
GCCCCCCGGACCACGTCCTG

Product: UDP-galactopyranose mutase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MKVDYLIVGAGFTGATLAERLAAAGKRVLVVDRRDHIGGNAYDEMDPHGVLVHRYGPHIFHTNSKKVFDYLSRFTEWRPY
YHRVRAVVEGKEVPLPFSLATLRALFSPKLADRLEEKLIARFGYGARVPILRLREEEDPDLRFLADYVYKNVFEGYTLKQ
WGLRPEELSPSVTARVPVLVSHDTRYFQDAYQAMPKEGYTALFRRMLAHPNIKLLLQADWKEVEGEVKFARLVFTGPIDE
FFGYLHGPLPYRSLRFRMELHPGPWAQEVGTVNYPNEHPYTRVTEFKHLTGQDYLPHSTLCYEYPEAYEPGRNEPYYPVP
REENEERYRLYLEEAKKLKGVYFAGRLGDYRYYNMDQAVARALKLFEEIVHE

Sequences:

>Translated_372_residues
MKVDYLIVGAGFTGATLAERLAAAGKRVLVVDRRDHIGGNAYDEMDPHGVLVHRYGPHIFHTNSKKVFDYLSRFTEWRPY
YHRVRAVVEGKEVPLPFSLATLRALFSPKLADRLEEKLIARFGYGARVPILRLREEEDPDLRFLADYVYKNVFEGYTLKQ
WGLRPEELSPSVTARVPVLVSHDTRYFQDAYQAMPKEGYTALFRRMLAHPNIKLLLQADWKEVEGEVKFARLVFTGPIDE
FFGYLHGPLPYRSLRFRMELHPGPWAQEVGTVNYPNEHPYTRVTEFKHLTGQDYLPHSTLCYEYPEAYEPGRNEPYYPVP
REENEERYRLYLEEAKKLKGVYFAGRLGDYRYYNMDQAVARALKLFEEIVHE
>Mature_372_residues
MKVDYLIVGAGFTGATLAERLAAAGKRVLVVDRRDHIGGNAYDEMDPHGVLVHRYGPHIFHTNSKKVFDYLSRFTEWRPY
YHRVRAVVEGKEVPLPFSLATLRALFSPKLADRLEEKLIARFGYGARVPILRLREEEDPDLRFLADYVYKNVFEGYTLKQ
WGLRPEELSPSVTARVPVLVSHDTRYFQDAYQAMPKEGYTALFRRMLAHPNIKLLLQADWKEVEGEVKFARLVFTGPIDE
FFGYLHGPLPYRSLRFRMELHPGPWAQEVGTVNYPNEHPYTRVTEFKHLTGQDYLPHSTLCYEYPEAYEPGRNEPYYPVP
REENEERYRLYLEEAKKLKGVYFAGRLGDYRYYNMDQAVARALKLFEEIVHE

Specific function: Involved in the conversion of UDP-GalP into UDP-GalF through a 2-keto intermediate [H]

COG id: COG0562

COG function: function code M; UDP-galactopyranose mutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788348, Length=371, Percent_Identity=37.1967654986523, Blast_Score=248, Evalue=6e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR016040
- InterPro:   IPR004379
- InterPro:   IPR015899 [H]

Pfam domain/function: PF01266 DAO; PF03275 GLF [H]

EC number: =5.4.99.9 [H]

Molecular weight: Translated: 43511; Mature: 43511

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVDYLIVGAGFTGATLAERLAAAGKRVLVVDRRDHIGGNAYDEMDPHGVLVHRYGPHIF
CCEEEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCEEE
HTNSKKVFDYLSRFTEWRPYYHRVRAVVEGKEVPLPFSLATLRALFSPKLADRLEEKLIA
ECCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHH
RFGYGARVPILRLREEEDPDLRFLADYVYKNVFEGYTLKQWGLRPEELSPSVTARVPVLV
HHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHCCCHHHCCCCCEEEEEEEE
SHDTRYFQDAYQAMPKEGYTALFRRMLAHPNIKLLLQADWKEVEGEVKFARLVFTGPIDE
ECCHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEECCHHHHCCCEEEEEEEEECCHHH
FFGYLHGPLPYRSLRFRMELHPGPWAQEVGTVNYPNEHPYTRVTEFKHLTGQDYLPHSTL
HHHHHCCCCCCCEEEEEEEECCCCCHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCE
CYEYPEAYEPGRNEPYYPVPREENEERYRLYLEEAKKLKGVYFAGRLGDYRYYNMDQAVA
EECCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCEEECHHHHHH
RALKLFEEIVHE
HHHHHHHHHHCC
>Mature Secondary Structure
MKVDYLIVGAGFTGATLAERLAAAGKRVLVVDRRDHIGGNAYDEMDPHGVLVHRYGPHIF
CCEEEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCEEE
HTNSKKVFDYLSRFTEWRPYYHRVRAVVEGKEVPLPFSLATLRALFSPKLADRLEEKLIA
ECCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHH
RFGYGARVPILRLREEEDPDLRFLADYVYKNVFEGYTLKQWGLRPEELSPSVTARVPVLV
HHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHCCCHHHCCCCCEEEEEEEE
SHDTRYFQDAYQAMPKEGYTALFRRMLAHPNIKLLLQADWKEVEGEVKFARLVFTGPIDE
ECCHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEECCHHHHCCCEEEEEEEEECCHHH
FFGYLHGPLPYRSLRFRMELHPGPWAQEVGTVNYPNEHPYTRVTEFKHLTGQDYLPHSTL
HHHHHCCCCCCCEEEEEEEECCCCCHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCE
CYEYPEAYEPGRNEPYYPVPREENEERYRLYLEEAKKLKGVYFAGRLGDYRYYNMDQAVA
EECCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCEEECHHHHHH
RALKLFEEIVHE
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7559323 [H]